RNA–Protein interactions for RNA: ENST00000606952.5

PMF1-206, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 1,275 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-206ENST00000606952 ADAMTS2O95450 1211 aa21.67■■□□□ 1.06
PMF1-206ENST00000606952 MTHFSDQ2M296 383 aaKnown RBP21.67■■□□□ 1.06
PMF1-206ENST00000606952 LARP1Q6PKG0 1096 aaKnown RBP21.67■■□□□ 1.06
PMF1-206ENST00000606952 GOLGA2Q08379 1002 aa21.66■■□□□ 1.06
PMF1-206ENST00000606952 TOM1L2Q6ZVM7 507 aa21.66■■□□□ 1.06
PMF1-206ENST00000606952 TRMT2AQ8IZ69 625 aaKnown RBP21.66■■□□□ 1.06
PMF1-206ENST00000606952 FNBP4Q8N3X1 1017 aaPredicted RBP21.66■■□□□ 1.06
PMF1-206ENST00000606952 SALL2Q9Y467 1007 aaPredicted RBP21.66■■□□□ 1.06
PMF1-206ENST00000606952 VIRMAQ69YN4 1812 aaKnown RBP21.66■■□□□ 1.06
PMF1-206ENST00000606952 BCL9LQ86UU0 1499 aa21.65■■□□□ 1.06
PMF1-206ENST00000606952 SENP3-EIF4A1A0A087X0R7 540 aa21.65■■□□□ 1.06
PMF1-206ENST00000606952 EVA1CP58658 441 aa21.65■■□□□ 1.06
PMF1-206ENST00000606952 MAP3K5Q99683 1374 aa21.64■■□□□ 1.06
PMF1-206ENST00000606952 NEUROD2Q15784 382 aa21.64■■□□□ 1.05
PMF1-206ENST00000606952 PLEKHO1Q53GL0 409 aaPredicted RBP21.64■■□□□ 1.05
PMF1-206ENST00000606952 RAPGEF4Q8WZA2 1011 aa21.64■■□□□ 1.05
PMF1-206ENST00000606952 E9PSI1 815 aa21.63■■□□□ 1.05
PMF1-206ENST00000606952 TATP17735 454 aaPredicted RBP21.63■■□□□ 1.05
PMF1-206ENST00000606952 SLFN5Q08AF3 891 aa21.63■■□□□ 1.05
PMF1-206ENST00000606952 STRN4Q9NRL3 753 aa21.63■■□□□ 1.05
PMF1-206ENST00000606952 CALD1Q05682 793 aaKnown RBP21.61■■□□□ 1.05
PMF1-206ENST00000606952 UNC5CLQ8IV45 518 aa21.61■■□□□ 1.05
PMF1-206ENST00000606952 THRAP3Q9Y2W1 955 aaKnown RBP21.61■■□□□ 1.05
PMF1-206ENST00000606952 SCN11AQ9UI33 1791 aa21.61■■□□□ 1.05
PMF1-206ENST00000606952 SPATA31A1Q5TZJ5 1347 aa21.6■■□□□ 1.05
PMF1-206ENST00000606952 DUSP27Q5VZP5 1158 aa21.6■■□□□ 1.05
PMF1-206ENST00000606952 CDCA7LQ96GN5 454 aa21.6■■□□□ 1.05
PMF1-206ENST00000606952 CEMIPQ8WUJ3 1361 aa21.6■■□□□ 1.05
PMF1-206ENST00000606952 SPATA31A5Q5VU36 1347 aa21.59■■□□□ 1.05
PMF1-206ENST00000606952 SPATA31A7Q8IWB4 1347 aa21.59■■□□□ 1.05
PMF1-206ENST00000606952 SIPA1L3O60292 1781 aaPredicted RBP21.59■■□□□ 1.05
PMF1-206ENST00000606952 GNAT3A8MTJ3 354 aa21.59■■□□□ 1.05
PMF1-206ENST00000606952 IL2RBP14784 551 aa21.59■■□□□ 1.05
PMF1-206ENST00000606952 AKAP4Q5JQC9 854 aa21.59■■□□□ 1.05
PMF1-206ENST00000606952 SPINK5Q9NQ38 1064 aaPredicted RBP21.59■■□□□ 1.05
PMF1-206ENST00000606952 VPS72Q15906 364 aa21.58■■□□□ 1.05
PMF1-206ENST00000606952 SPG7Q9UQ90 795 aa21.58■■□□□ 1.05
PMF1-206ENST00000606952 ZNF853P0CG23 659 aa21.57■■□□□ 1.04
PMF1-206ENST00000606952 MEX3CQ5U5Q3 659 aaKnown RBP21.57■■□□□ 1.04
PMF1-206ENST00000606952 ZNF530Q6P9A1 599 aaPredicted RBP21.57■■□□□ 1.04
PMF1-206ENST00000606952 NGLY1Q96IV0 654 aa21.57■■□□□ 1.04
PMF1-206ENST00000606952 C8orf37Q96NL8 207 aa21.57■■□□□ 1.04
PMF1-206ENST00000606952 MRC1P22897 1456 aa21.57■■□□□ 1.04
PMF1-206ENST00000606952 CDCA7Q9BWT1 371 aaPredicted RBP21.56■■□□□ 1.04
PMF1-206ENST00000606952 IFT57Q9NWB7 429 aa21.56■■□□□ 1.04
PMF1-206ENST00000606952 ATRNO75882 1429 aa21.55■■□□□ 1.04
PMF1-206ENST00000606952 BARGINQ6ZT62 677 aa21.55■■□□□ 1.04
PMF1-206ENST00000606952 MYH16Q9H6N6 1097 aa21.55■■□□□ 1.04
PMF1-206ENST00000606952 THSD7AQ9UPZ6 1657 aa21.55■■□□□ 1.04
PMF1-206ENST00000606952 TNS2Q63HR2 1409 aa21.55■■□□□ 1.04
PMF1-206ENST00000606952 RTF1Q92541 710 aaKnown RBP21.54■■□□□ 1.04
PMF1-206ENST00000606952 PCDH11XQ9BZA7 1347 aa21.54■■□□□ 1.04
PMF1-206ENST00000606952 PCDH11YQ9BZA8 1340 aa21.54■■□□□ 1.04
PMF1-206ENST00000606952 KDM3BQ7LBC6 1761 aa21.53■■□□□ 1.04
PMF1-206ENST00000606952 PHKG2P15735 406 aa21.53■■□□□ 1.04
PMF1-206ENST00000606952 ZCRB1Q8TBF4 217 aaKnown RBP21.53■■□□□ 1.04
PMF1-206ENST00000606952 GLI3P10071 1580 aa21.53■■□□□ 1.04
PMF1-206ENST00000606952 GNAI1P63096 354 aa21.52■■□□□ 1.04
PMF1-206ENST00000606952 C1orf141Q5JVX7 400 aa21.52■■□□□ 1.04
PMF1-206ENST00000606952 IFNL2Q8IZJ0 200 aa21.52■■□□□ 1.04
PMF1-206ENST00000606952 IL17REQ8NFR9 667 aa21.52■■□□□ 1.04
PMF1-206ENST00000606952 CFAP44Q96MT7 982 aa21.52■■□□□ 1.04
PMF1-206ENST00000606952 KDM6AO15550 1401 aaPredicted RBP21.52■■□□□ 1.04
PMF1-206ENST00000606952 CYP27B1O15528 508 aa21.51■■□□□ 1.03
PMF1-206ENST00000606952 DCTN1Q14203 1278 aa21.51■■□□□ 1.03
PMF1-206ENST00000606952 MCM10Q7L590 875 aa21.51■■□□□ 1.03
PMF1-206ENST00000606952 THUMPD2Q9BTF0 503 aaKnown RBP21.51■■□□□ 1.03
PMF1-206ENST00000606952 BABAM1Q9NWV8 329 aa21.51■■□□□ 1.03
PMF1-206ENST00000606952 USP21Q9UK80 565 aa21.51■■□□□ 1.03
PMF1-206ENST00000606952 FANCIQ9NVI1 1328 aa21.51■■□□□ 1.03
PMF1-206ENST00000606952 HSP90AB1P08238 724 aaKnown RBP21.5■■□□□ 1.03
PMF1-206ENST00000606952 NKX1-1Q15270 411 aaPredicted RBP21.5■■□□□ 1.03
PMF1-206ENST00000606952 ILDR1Q86SU0 546 aaPredicted RBP21.5■■□□□ 1.03
PMF1-206ENST00000606952 AFF2P51816 1311 aa21.5■■□□□ 1.03
PMF1-206ENST00000606952 CHL1O00533 1208 aa21.49■■□□□ 1.03
PMF1-206ENST00000606952 RNMTO43148 476 aaKnown RBP21.49■■□□□ 1.03
PMF1-206ENST00000606952 TOGARAM1Q9Y4F4 1720 aa21.49■■□□□ 1.03
PMF1-206ENST00000606952 CT47B1P0C2W7 299 aaPredicted RBP21.47■■□□□ 1.03
PMF1-206ENST00000606952 DCAF5Q96JK2 942 aa21.47■■□□□ 1.03
PMF1-206ENST00000606952 USP35Q9P2H5 1018 aa21.46■■□□□ 1.03
PMF1-206ENST00000606952 MBIPQ9NS73 344 aa21.45■■□□□ 1.02
PMF1-206ENST00000606952 PAPPAQ13219 1627 aa21.44■■□□□ 1.02
PMF1-206ENST00000606952 LGR6Q9HBX8 967 aa21.44■■□□□ 1.02
PMF1-206ENST00000606952 TRPC5Q9UL62 973 aaPredicted RBP21.44■■□□□ 1.02
PMF1-206ENST00000606952 TAF7Q15545 349 aaPredicted RBP21.43■■□□□ 1.02
PMF1-206ENST00000606952 MPRIPQ6WCQ1 1025 aa21.43■■□□□ 1.02
PMF1-206ENST00000606952 RNF123Q5XPI4 1314 aa21.42■■□□□ 1.02
PMF1-206ENST00000606952 TSR2Q969E8 191 aaKnown RBP21.42■■□□□ 1.02
PMF1-206ENST00000606952 GJD4Q96KN9 370 aaPredicted RBP21.42■■□□□ 1.02
PMF1-206ENST00000606952 ITGB4P16144 1822 aa21.41■■□□□ 1.02
PMF1-206ENST00000606952 EXOC5O00471 708 aa21.41■■□□□ 1.02
PMF1-206ENST00000606952 ONECUT3O60422 494 aaPredicted RBP21.41■■□□□ 1.02
PMF1-206ENST00000606952 TEFQ10587 303 aa21.4■■□□□ 1.02
PMF1-206ENST00000606952 SLC52A2Q9HAB3 445 aa21.4■■□□□ 1.02
PMF1-206ENST00000606952 RCAN3Q9UKA8 241 aa21.4■■□□□ 1.02
PMF1-206ENST00000606952 CCDC9Q9Y3X0 531 aaKnown RBP21.4■■□□□ 1.02
PMF1-206ENST00000606952 UBR2Q8IWV8 1755 aa21.4■■□□□ 1.02
PMF1-206ENST00000606952 DOT1LQ8TEK3 1739 aa21.4■■□□□ 1.02
PMF1-206ENST00000606952 SOS1Q07889 1333 aaPredicted RBP21.39■■□□□ 1.01
PMF1-206ENST00000606952 ERVV-2B6SEH9 535 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms