RNA–Protein interactions for RNA: ENST00000604440.5

SH3D19-212, Transcript of SH3 domain containing 19, humanhuman

TSL 4

Gene SH3D19, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-212ENST00000604440 MSH6P52701 1360 aa13.17□□□□□ -0.3
SH3D19-212ENST00000604440 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.16□□□□□ -0.3
SH3D19-212ENST00000604440 RPRD2Q5VT52 1461 aaKnown RBP13.16□□□□□ -0.3
SH3D19-212ENST00000604440 E9PCH4 1651 aa13.15□□□□□ -0.3
SH3D19-212ENST00000604440 TMEM131LA2VDJ0 1609 aa13.15□□□□□ -0.3
SH3D19-212ENST00000604440 SLC10A3P09131 477 aa13.15□□□□□ -0.3
SH3D19-212ENST00000604440 KMT5BQ4FZB7 885 aa13.15□□□□□ -0.3
SH3D19-212ENST00000604440 PXYLP1Q8TE99 480 aa13.15□□□□□ -0.3
SH3D19-212ENST00000604440 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.15□□□□□ -0.3
SH3D19-212ENST00000604440 CDK12Q9NYV4 1490 aaPredicted RBP13.15□□□□□ -0.3
SH3D19-212ENST00000604440 TESPA1A2RU30 521 aaPredicted RBP13.14□□□□□ -0.31
SH3D19-212ENST00000604440 IDI1Q13907 227 aa13.14□□□□□ -0.31
SH3D19-212ENST00000604440 TRAF7Q6Q0C0 670 aa13.14□□□□□ -0.31
SH3D19-212ENST00000604440 TRIM52Q96A61 297 aa13.14□□□□□ -0.31
SH3D19-212ENST00000604440 PLEKHG1Q9ULL1 1385 aa13.14□□□□□ -0.31
SH3D19-212ENST00000604440 SPATA31A6Q5VVP1 1343 aa13.13□□□□□ -0.31
SH3D19-212ENST00000604440 RNF223E7ERA6 249 aa13.13□□□□□ -0.31
SH3D19-212ENST00000604440 PROSER2Q86WR7 435 aaPredicted RBP13.13□□□□□ -0.31
SH3D19-212ENST00000604440 HIC1Q14526 733 aa13.12□□□□□ -0.31
SH3D19-212ENST00000604440 SLC26A8Q96RN1 970 aa13.12□□□□□ -0.31
SH3D19-212ENST00000604440 SLAIN2Q9P270 581 aa13.12□□□□□ -0.31
SH3D19-212ENST00000604440 OATP04181 439 aa13.11□□□□□ -0.31
SH3D19-212ENST00000604440 PLCB2Q00722 1185 aa13.11□□□□□ -0.31
SH3D19-212ENST00000604440 RBM26Q5T8P6 1007 aaKnown RBP13.11□□□□□ -0.31
SH3D19-212ENST00000604440 EMID1Q96A84 441 aaPredicted RBP13.11□□□□□ -0.31
SH3D19-212ENST00000604440 PDZRN3Q9UPQ7 1066 aa13.11□□□□□ -0.31
SH3D19-212ENST00000604440 NHSL1Q5SYE7 1610 aa13.1□□□□□ -0.31
SH3D19-212ENST00000604440 METTL3Q86U44 580 aaKnown RBP13.1□□□□□ -0.31
SH3D19-212ENST00000604440 SETD5Q9C0A6 1442 aa13.09□□□□□ -0.31
SH3D19-212ENST00000604440 SLC52A1Q9NWF4 448 aa13.09□□□□□ -0.31
SH3D19-212ENST00000604440 DCCP43146 1447 aa13.08□□□□□ -0.32
SH3D19-212ENST00000604440 ADAMTS13Q76LX8 1427 aa13.08□□□□□ -0.32
SH3D19-212ENST00000604440 GPR37O15354 613 aa13.08□□□□□ -0.32
SH3D19-212ENST00000604440 XRN1Q8IZH2 1706 aaKnown RBP13.08□□□□□ -0.32
SH3D19-212ENST00000604440 PIK3R4Q99570 1358 aa13.07□□□□□ -0.32
SH3D19-212ENST00000604440 RAB3GAP2Q9H2M9 1393 aa13.07□□□□□ -0.32
SH3D19-212ENST00000604440 RIMS2Q9UQ26 1411 aa13.07□□□□□ -0.32
SH3D19-212ENST00000604440 S1PR4O95977 384 aa13.07□□□□□ -0.32
SH3D19-212ENST00000604440 ZNF772Q68DY9 489 aaPredicted RBP13.07□□□□□ -0.32
SH3D19-212ENST00000604440 SPHKAPQ2M3C7 1700 aa13.07□□□□□ -0.32
SH3D19-212ENST00000604440 ANKLE1Q8NAG6 615 aa13.06□□□□□ -0.32
SH3D19-212ENST00000604440 EP400Q96L91 3159 aa13.06□□□□□ -0.32
SH3D19-212ENST00000604440 TRPM2O94759 1503 aa13.05□□□□□ -0.32
SH3D19-212ENST00000604440 ASXL1Q8IXJ9 1541 aa13.05□□□□□ -0.32
SH3D19-212ENST00000604440 ADH1BP00325 375 aa13.05□□□□□ -0.32
SH3D19-212ENST00000604440 FECHP22830 423 aa13.05□□□□□ -0.32
SH3D19-212ENST00000604440 SLC19A1P41440 591 aa13.05□□□□□ -0.32
SH3D19-212ENST00000604440 TRIM67Q6ZTA4 783 aa13.05□□□□□ -0.32
SH3D19-212ENST00000604440 NRXN3Q9Y4C0 1643 aa13.05□□□□□ -0.32
SH3D19-212ENST00000604440 NR1I2O75469 434 aa13.04□□□□□ -0.32
SH3D19-212ENST00000604440 TBX22Q9Y458 520 aa13.04□□□□□ -0.32
SH3D19-212ENST00000604440 LAMC1P11047 1609 aa13.03□□□□□ -0.32
SH3D19-212ENST00000604440 PPEF1O14829 653 aaPredicted RBP13.03□□□□□ -0.32
SH3D19-212ENST00000604440 GNPATO15228 680 aa13.03□□□□□ -0.32
SH3D19-212ENST00000604440 SMYD5Q6GMV2 418 aa13.02□□□□□ -0.33
SH3D19-212ENST00000604440 RGS12O14924 1447 aa13.02□□□□□ -0.33
SH3D19-212ENST00000604440 CLTCL1P53675 1640 aa13.02□□□□□ -0.33
SH3D19-212ENST00000604440 SPRYD7Q5W111 196 aa13.01□□□□□ -0.33
SH3D19-212ENST00000604440 SETBP1Q9Y6X0 1596 aa13.01□□□□□ -0.33
SH3D19-212ENST00000604440 PTPRUQ92729 1446 aa13□□□□□ -0.33
SH3D19-212ENST00000604440 MPHOSPH9Q99550 1183 aa13□□□□□ -0.33
SH3D19-212ENST00000604440 C19orf44Q9H6X5 657 aa13□□□□□ -0.33
SH3D19-212ENST00000604440 MST1RQ04912 1400 aa12.99□□□□□ -0.33
SH3D19-212ENST00000604440 RXRBP28702 533 aa12.99□□□□□ -0.33
SH3D19-212ENST00000604440 MEX3CQ5U5Q3 659 aaKnown RBP12.99□□□□□ -0.33
SH3D19-212ENST00000604440 BRINP3Q76B58 766 aa12.99□□□□□ -0.33
SH3D19-212ENST00000604440 SCUBE3Q8IX30 993 aa12.99□□□□□ -0.33
SH3D19-212ENST00000604440 NALCNQ8IZF0 1738 aa12.99□□□□□ -0.33
SH3D19-212ENST00000604440 PUS10Q3MIT2 529 aaKnown RBP12.98□□□□□ -0.33
SH3D19-212ENST00000604440 LIAT1Q6ZQX7 453 aa12.98□□□□□ -0.33
SH3D19-212ENST00000604440 ZNF598Q86UK7 904 aaKnown RBP12.98□□□□□ -0.33
SH3D19-212ENST00000604440 NUTM2DQ5VT03 806 aaPredicted RBP12.97□□□□□ -0.33
SH3D19-212ENST00000604440 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.97□□□□□ -0.33
SH3D19-212ENST00000604440 SLC6A16Q9GZN6 736 aa12.97□□□□□ -0.33
SH3D19-212ENST00000604440 PPP1R15AO75807 674 aaPredicted RBP12.96□□□□□ -0.33
SH3D19-212ENST00000604440 PLA2G2CQ5R387 149 aa12.96□□□□□ -0.33
SH3D19-212ENST00000604440 DAXXQ9UER7 740 aaPredicted RBP12.96□□□□□ -0.33
SH3D19-212ENST00000604440 KIF1BO60333 1816 aa12.95□□□□□ -0.34
SH3D19-212ENST00000604440 AFF2P51816 1311 aa12.95□□□□□ -0.34
SH3D19-212ENST00000604440 ATF3P18847 181 aa12.95□□□□□ -0.34
SH3D19-212ENST00000604440 PRR20EP86478 221 aa12.95□□□□□ -0.34
SH3D19-212ENST00000604440 PRR20CP86479 221 aa12.95□□□□□ -0.34
SH3D19-212ENST00000604440 PRR20DP86480 221 aa12.95□□□□□ -0.34
SH3D19-212ENST00000604440 PRR20BP86481 221 aa12.95□□□□□ -0.34
SH3D19-212ENST00000604440 PRR20AP86496 221 aa12.95□□□□□ -0.34
SH3D19-212ENST00000604440 TRIM26Q12899 539 aaPredicted RBP12.95□□□□□ -0.34
SH3D19-212ENST00000604440 NLRP7Q8WX94 980 aa12.95□□□□□ -0.34
SH3D19-212ENST00000604440 BCANQ96GW7 911 aa12.95□□□□□ -0.34
SH3D19-212ENST00000604440 PNPLA6Q8IY17 1366 aa12.94□□□□□ -0.34
SH3D19-212ENST00000604440 ZNF326Q5BKZ1 582 aaKnown RBP12.94□□□□□ -0.34
SH3D19-212ENST00000604440 COL22A1Q8NFW1 1626 aaPredicted RBP12.94□□□□□ -0.34
SH3D19-212ENST00000604440 ADGRL3Q9HAR2 1447 aa12.94□□□□□ -0.34
SH3D19-212ENST00000604440 ZNF697Q5TEC3 545 aa12.93□□□□□ -0.34
SH3D19-212ENST00000604440 RDH13Q8NBN7 331 aa12.93□□□□□ -0.34
SH3D19-212ENST00000604440 PHOX2BQ99453 314 aa12.93□□□□□ -0.34
SH3D19-212ENST00000604440 C14orf37Q86TY3 774 aa12.92□□□□□ -0.34
SH3D19-212ENST00000604440 SPSB2Q99619 263 aa12.92□□□□□ -0.34
SH3D19-212ENST00000604440 CCDC144AA2RUR9 1427 aa12.91□□□□□ -0.34
SH3D19-212ENST00000604440 PRAG1Q86YV5 1406 aa12.91□□□□□ -0.34
SH3D19-212ENST00000604440 DDX11L8A8MPP1 907 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms