RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 RPS6KC1Q96S38 1066 aa6.34□□□□□ -1.39
SPTBN1-206ENST00000602898 TANGO6Q9C0B7 1094 aa6.34□□□□□ -1.39
SPTBN1-206ENST00000602898 RPGRIP1LQ68CZ1 1315 aa6.33□□□□□ -1.4
SPTBN1-206ENST00000602898 GOLGA6CA6NDK9 693 aa6.33□□□□□ -1.4
SPTBN1-206ENST00000602898 GOLGA6BA6NDN3 693 aa6.33□□□□□ -1.4
SPTBN1-206ENST00000602898 GOLGA6DP0CG33 693 aa6.33□□□□□ -1.4
SPTBN1-206ENST00000602898 SCNN1AP37088 669 aa6.33□□□□□ -1.4
SPTBN1-206ENST00000602898 TBX4P57082 545 aa6.33□□□□□ -1.4
SPTBN1-206ENST00000602898 SF3A1Q15459 793 aaKnown RBP6.33□□□□□ -1.4
SPTBN1-206ENST00000602898 RGL3Q3MIN7 710 aa6.33□□□□□ -1.4
SPTBN1-206ENST00000602898 ZKSCAN2Q63HK3 967 aa6.33□□□□□ -1.4
SPTBN1-206ENST00000602898 POTEEQ6S8J3 1075 aa6.33□□□□□ -1.4
SPTBN1-206ENST00000602898 ZNF830Q96NB3 372 aaPredicted RBP6.33□□□□□ -1.4
SPTBN1-206ENST00000602898 GOLGA6AQ9NYA3 693 aa6.33□□□□□ -1.4
SPTBN1-206ENST00000602898 MAP3K20Q9NYL2 800 aaKnown RBP6.33□□□□□ -1.4
SPTBN1-206ENST00000602898 WWC3Q9ULE0 1092 aa6.33□□□□□ -1.4
SPTBN1-206ENST00000602898 FGD5Q6ZNL6 1462 aa6.33□□□□□ -1.4
SPTBN1-206ENST00000602898 APPP05067 770 aa6.33□□□□□ -1.4
SPTBN1-206ENST00000602898 ERCC5P28715 1186 aaPredicted RBP6.33□□□□□ -1.4
SPTBN1-206ENST00000602898 CFAP70Q5T0N1 1121 aa6.33□□□□□ -1.4
SPTBN1-206ENST00000602898 GIGYF2Q6Y7W6 1299 aaKnown RBP6.33□□□□□ -1.4
SPTBN1-206ENST00000602898 SMAP1Q8IYB5 467 aaPredicted RBP6.33□□□□□ -1.4
SPTBN1-206ENST00000602898 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.33□□□□□ -1.4
SPTBN1-206ENST00000602898 CXorf38Q8TB03 319 aa6.33□□□□□ -1.4
SPTBN1-206ENST00000602898 STAG1Q8WVM7 1258 aa6.33□□□□□ -1.4
SPTBN1-206ENST00000602898 KCNK17Q96T54 332 aa6.33□□□□□ -1.4
SPTBN1-206ENST00000602898 TMEM51Q9NW97 253 aa6.33□□□□□ -1.4
SPTBN1-206ENST00000602898 CUL7Q14999 1698 aa6.33□□□□□ -1.4
SPTBN1-206ENST00000602898 TTC37Q6PGP7 1564 aa6.33□□□□□ -1.4
SPTBN1-206ENST00000602898 SDE2Q6IQ49 451 aa6.32□□□□□ -1.4
SPTBN1-206ENST00000602898 TTC30BQ8N4P2 665 aa6.32□□□□□ -1.4
SPTBN1-206ENST00000602898 ANP32BQ92688 251 aaKnown RBP6.32□□□□□ -1.4
SPTBN1-206ENST00000602898 ZDHHC16Q969W1 377 aa6.32□□□□□ -1.4
SPTBN1-206ENST00000602898 SEPT9Q9UHD8 586 aaPredicted RBP6.32□□□□□ -1.4
SPTBN1-206ENST00000602898 ABCC2Q92887 1545 aa6.32□□□□□ -1.4
SPTBN1-206ENST00000602898 GTF2F1P35269 517 aaKnown RBP eCLIP6.32□□□□□ -1.4
SPTBN1-206ENST00000602898 ANP32AP39687 249 aaKnown RBP6.32□□□□□ -1.4
SPTBN1-206ENST00000602898 MMP14P50281 582 aa6.32□□□□□ -1.4
SPTBN1-206ENST00000602898 SEMA3FQ13275 785 aa6.32□□□□□ -1.4
SPTBN1-206ENST00000602898 BIRC2Q13490 618 aa6.32□□□□□ -1.4
SPTBN1-206ENST00000602898 TSKSQ9UJT2 592 aa6.32□□□□□ -1.4
SPTBN1-206ENST00000602898 ABL2P42684 1182 aa6.32□□□□□ -1.4
SPTBN1-206ENST00000602898 SRPK2P78362 688 aaKnown RBP6.32□□□□□ -1.4
SPTBN1-206ENST00000602898 VARS2Q5ST30 1063 aaKnown RBP6.32□□□□□ -1.4
SPTBN1-206ENST00000602898 PMFBP1Q8TBY8 1022 aa6.32□□□□□ -1.4
SPTBN1-206ENST00000602898 GOPCQ9HD26 462 aa6.32□□□□□ -1.4
SPTBN1-206ENST00000602898 POLR3EQ9NVU0 708 aa6.32□□□□□ -1.4
SPTBN1-206ENST00000602898 FBXO9Q9UK97 447 aaPredicted RBP6.32□□□□□ -1.4
SPTBN1-206ENST00000602898 PTPRTO14522 1441 aa6.31□□□□□ -1.4
SPTBN1-206ENST00000602898 UTP14CQ5TAP6 766 aaKnown RBP6.31□□□□□ -1.4
SPTBN1-206ENST00000602898 RPUSD2Q8IZ73 545 aaKnown RBP6.31□□□□□ -1.4
SPTBN1-206ENST00000602898 JPH4Q96JJ6 628 aa6.31□□□□□ -1.4
SPTBN1-206ENST00000602898 ARHGEF10LQ9HCE6 1279 aa6.31□□□□□ -1.4
SPTBN1-206ENST00000602898 TLDC2A0PJX2 215 aa6.31□□□□□ -1.4
SPTBN1-206ENST00000602898 TTC36A6NLP5 189 aa6.31□□□□□ -1.4
SPTBN1-206ENST00000602898 NPAS4Q8IUM7 802 aa6.31□□□□□ -1.4
SPTBN1-206ENST00000602898 FMNL3Q8IVF7 1028 aa6.31□□□□□ -1.4
SPTBN1-206ENST00000602898 CDCA7LQ96GN5 454 aa6.31□□□□□ -1.4
SPTBN1-206ENST00000602898 CFAP74Q9C0B2 1584 aa6.31□□□□□ -1.4
SPTBN1-206ENST00000602898 FAM205CA6NFA0 338 aa6.3□□□□□ -1.4
SPTBN1-206ENST00000602898 TYW1BQ6NUM6 668 aa6.3□□□□□ -1.4
SPTBN1-206ENST00000602898 JAZF1Q86VZ6 243 aa6.3□□□□□ -1.4
SPTBN1-206ENST00000602898 TBX22Q9Y458 520 aa6.3□□□□□ -1.4
SPTBN1-206ENST00000602898 POTEB3A0JP26 581 aa6.3□□□□□ -1.4
SPTBN1-206ENST00000602898 TSPOAP1O95153 1857 aa6.3□□□□□ -1.4
SPTBN1-206ENST00000602898 USP5P45974 858 aa6.3□□□□□ -1.4
SPTBN1-206ENST00000602898 IRX3P78415 501 aaPredicted RBP6.3□□□□□ -1.4
SPTBN1-206ENST00000602898 DOK7Q18PE1 504 aa6.3□□□□□ -1.4
SPTBN1-206ENST00000602898 POTEBQ6S5H4 581 aa6.3□□□□□ -1.4
SPTBN1-206ENST00000602898 METTL3Q86U44 580 aaKnown RBP6.3□□□□□ -1.4
SPTBN1-206ENST00000602898 COMMD10Q9Y6G5 202 aa6.3□□□□□ -1.4
SPTBN1-206ENST00000602898 KDM5BQ9UGL1 1544 aa6.3□□□□□ -1.4
SPTBN1-206ENST00000602898 CFAP69A5D8W1 941 aa6.29□□□□□ -1.4
SPTBN1-206ENST00000602898 EXOC5O00471 708 aa6.29□□□□□ -1.4
SPTBN1-206ENST00000602898 ENOX2Q16206 610 aaKnown RBP6.29□□□□□ -1.4
SPTBN1-206ENST00000602898 HSP90AB2PQ58FF8 381 aa6.29□□□□□ -1.4
SPTBN1-206ENST00000602898 LHX8Q68G74 356 aa6.29□□□□□ -1.4
SPTBN1-206ENST00000602898 NBPF11Q86T75 865 aa6.29□□□□□ -1.4
SPTBN1-206ENST00000602898 FAM163AQ96GL9 167 aaPredicted RBP6.29□□□□□ -1.4
SPTBN1-206ENST00000602898 IRF2BPLQ9H1B7 796 aa6.29□□□□□ -1.4
SPTBN1-206ENST00000602898 TPX2Q9ULW0 747 aaKnown RBP6.29□□□□□ -1.4
SPTBN1-206ENST00000602898 ST18O60284 1047 aa6.29□□□□□ -1.4
SPTBN1-206ENST00000602898 TPM2P07951 284 aa6.29□□□□□ -1.4
SPTBN1-206ENST00000602898 SCP2P22307 547 aa6.29□□□□□ -1.4
SPTBN1-206ENST00000602898 PPP4CP60510 307 aa6.29□□□□□ -1.4
SPTBN1-206ENST00000602898 BMS1Q14692 1282 aaKnown RBP6.29□□□□□ -1.4
SPTBN1-206ENST00000602898 CASC1Q6TDU7 716 aa6.29□□□□□ -1.4
SPTBN1-206ENST00000602898 MRPL42Q9Y6G3 142 aaKnown RBP6.29□□□□□ -1.4
SPTBN1-206ENST00000602898 NBPF1Q3BBV0 1214 aa6.29□□□□□ -1.4
SPTBN1-206ENST00000602898 AMOTL1Q8IY63 956 aa6.29□□□□□ -1.4
SPTBN1-206ENST00000602898 MPHOSPH6Q99547 160 aaKnown RBP6.29□□□□□ -1.4
SPTBN1-206ENST00000602898 PNNQ9H307 717 aaKnown RBP6.29□□□□□ -1.4
SPTBN1-206ENST00000602898 MINK1Q8N4C8 1332 aaPredicted RBP6.28□□□□□ -1.4
SPTBN1-206ENST00000602898 CUX1P39880 1505 aa6.28□□□□□ -1.4
SPTBN1-206ENST00000602898 ANKRD33BA6NCL7 494 aa6.28□□□□□ -1.4
SPTBN1-206ENST00000602898 PLEKHG6Q3KR16 790 aa6.28□□□□□ -1.4
SPTBN1-206ENST00000602898 AXDND1Q5T1B0 1012 aaPredicted RBP6.28□□□□□ -1.4
SPTBN1-206ENST00000602898 HLA-CQ95604 372 aa6.28□□□□□ -1.4
SPTBN1-206ENST00000602898 ZSWIM4Q9H7M6 989 aa6.28□□□□□ -1.4
SPTBN1-206ENST00000602898 FRMD4BQ9Y2L6 1034 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms