RNA–Protein interactions for RNA: ENST00000602086.5

ZNF548-212, Transcript of zinc finger protein 548, humanhuman

TSL 4

Gene ZNF548, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-212ENST00000602086 SPINK5Q9NQ38 1064 aaPredicted RBP18.76■□□□□ 0.59
ZNF548-212ENST00000602086 RCAN3Q9UKA8 241 aa18.75■□□□□ 0.59
ZNF548-212ENST00000602086 SUPT16HQ9Y5B9 1047 aaKnown RBP18.75■□□□□ 0.59
ZNF548-212ENST00000602086 ATRNO75882 1429 aa18.74■□□□□ 0.59
ZNF548-212ENST00000602086 PRDM11Q9NQV5 511 aa18.74■□□□□ 0.59
ZNF548-212ENST00000602086 NEFLP07196 543 aa18.73■□□□□ 0.59
ZNF548-212ENST00000602086 CT47B1P0C2W7 299 aaPredicted RBP18.73■□□□□ 0.59
ZNF548-212ENST00000602086 HAP1P54257 671 aaPredicted RBP18.73■□□□□ 0.59
ZNF548-212ENST00000602086 COL14A1Q05707 1796 aaKnown RBP18.73■□□□□ 0.59
ZNF548-212ENST00000602086 BRWD3Q6RI45 1802 aa18.72■□□□□ 0.59
ZNF548-212ENST00000602086 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.72■□□□□ 0.59
ZNF548-212ENST00000602086 MTHFSDQ2M296 383 aaKnown RBP18.72■□□□□ 0.59
ZNF548-212ENST00000602086 AMOTQ4VCS5 1084 aa18.72■□□□□ 0.59
ZNF548-212ENST00000602086 ERICH6BQ5W0A0 696 aa18.72■□□□□ 0.59
ZNF548-212ENST00000602086 TRPC5Q9UL62 973 aaPredicted RBP18.72■□□□□ 0.59
ZNF548-212ENST00000602086 PLEKHG5O94827 1062 aa18.71■□□□□ 0.59
ZNF548-212ENST00000602086 GNAI1P63096 354 aa18.71■□□□□ 0.59
ZNF548-212ENST00000602086 IFT57Q9NWB7 429 aa18.71■□□□□ 0.59
ZNF548-212ENST00000602086 WDR17Q8IZU2 1322 aa18.71■□□□□ 0.59
ZNF548-212ENST00000602086 COL5A2P05997 1499 aaPredicted RBP18.71■□□□□ 0.59
ZNF548-212ENST00000602086 ZNF853P0CG23 659 aa18.7■□□□□ 0.58
ZNF548-212ENST00000602086 CHRNA2Q15822 529 aa18.7■□□□□ 0.58
ZNF548-212ENST00000602086 PLEKHO1Q53GL0 409 aaPredicted RBP18.69■□□□□ 0.58
ZNF548-212ENST00000602086 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.69■□□□□ 0.58
ZNF548-212ENST00000602086 LRRC37A3O60309 1634 aa18.69■□□□□ 0.58
ZNF548-212ENST00000602086 BCL9LQ86UU0 1499 aa18.69■□□□□ 0.58
ZNF548-212ENST00000602086 USHBP1Q8N6Y0 703 aa18.68■□□□□ 0.58
ZNF548-212ENST00000602086 CFAP44Q96MT7 982 aa18.68■□□□□ 0.58
ZNF548-212ENST00000602086 FANCIQ9NVI1 1328 aa18.68■□□□□ 0.58
ZNF548-212ENST00000602086 GLI3P10071 1580 aa18.68■□□□□ 0.58
ZNF548-212ENST00000602086 MAP3K5Q99683 1374 aa18.68■□□□□ 0.58
ZNF548-212ENST00000602086 PLCH1Q4KWH8 1693 aa18.67■□□□□ 0.58
ZNF548-212ENST00000602086 GNAT3A8MTJ3 354 aa18.67■□□□□ 0.58
ZNF548-212ENST00000602086 FNBP4Q8N3X1 1017 aaPredicted RBP18.67■□□□□ 0.58
ZNF548-212ENST00000602086 RTF1Q92541 710 aaKnown RBP18.67■□□□□ 0.58
ZNF548-212ENST00000602086 OVOS2A0A0G2JMS6 1433 aa18.66■□□□□ 0.58
ZNF548-212ENST00000602086 FAM83GA6ND36 823 aa18.66■□□□□ 0.58
ZNF548-212ENST00000602086 CSB-PGBD3P0DP91 1061 aa18.66■□□□□ 0.58
ZNF548-212ENST00000602086 BABAM1Q9NWV8 329 aa18.66■□□□□ 0.58
ZNF548-212ENST00000602086 NLRP2Q9NX02 1062 aa18.66■□□□□ 0.58
ZNF548-212ENST00000602086 CRB1P82279 1406 aa18.66■□□□□ 0.58
ZNF548-212ENST00000602086 AKAP4Q5JQC9 854 aa18.65■□□□□ 0.58
ZNF548-212ENST00000602086 ZNF428Q96B54 188 aa18.65■□□□□ 0.58
ZNF548-212ENST00000602086 CARD10Q9BWT7 1032 aa18.65■□□□□ 0.58
ZNF548-212ENST00000602086 PKD1L3Q7Z443 1732 aa18.65■□□□□ 0.58
ZNF548-212ENST00000602086 PARP4Q9UKK3 1724 aaKnown RBP18.64■□□□□ 0.57
ZNF548-212ENST00000602086 RRP1P56182 461 aaKnown RBP18.64■□□□□ 0.57
ZNF548-212ENST00000602086 RAPGEF4Q8WZA2 1011 aa18.64■□□□□ 0.57
ZNF548-212ENST00000602086 ADAMTS7Q9UKP4 1686 aa18.63■□□□□ 0.57
ZNF548-212ENST00000602086 EP400Q96L91 3159 aa18.63■□□□□ 0.57
ZNF548-212ENST00000602086 TATP17735 454 aaPredicted RBP18.63■□□□□ 0.57
ZNF548-212ENST00000602086 CEMIPQ8WUJ3 1361 aa18.63■□□□□ 0.57
ZNF548-212ENST00000602086 CHL1O00533 1208 aa18.62■□□□□ 0.57
ZNF548-212ENST00000602086 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.62■□□□□ 0.57
ZNF548-212ENST00000602086 NWD2Q9ULI1 1742 aa18.61■□□□□ 0.57
ZNF548-212ENST00000602086 FKBP8Q14318 412 aa18.61■□□□□ 0.57
ZNF548-212ENST00000602086 THUMPD2Q9BTF0 503 aaKnown RBP18.61■□□□□ 0.57
ZNF548-212ENST00000602086 SPG7Q9UQ90 795 aa18.61■□□□□ 0.57
ZNF548-212ENST00000602086 MEGF6O75095 1541 aa18.6■□□□□ 0.57
ZNF548-212ENST00000602086 EXOSC9Q06265 439 aaKnown RBP18.6■□□□□ 0.57
ZNF548-212ENST00000602086 DCTN1Q14203 1278 aa18.6■□□□□ 0.57
ZNF548-212ENST00000602086 ZNF530Q6P9A1 599 aaPredicted RBP18.6■□□□□ 0.57
ZNF548-212ENST00000602086 MCM10Q7L590 875 aa18.6■□□□□ 0.57
ZNF548-212ENST00000602086 TSR2Q969E8 191 aaKnown RBP18.6■□□□□ 0.57
ZNF548-212ENST00000602086 MBIPQ9NS73 344 aa18.6■□□□□ 0.57
ZNF548-212ENST00000602086 SLIT2O94813 1529 aa18.59■□□□□ 0.57
ZNF548-212ENST00000602086 RARSP54136 660 aaKnown RBP18.59■□□□□ 0.57
ZNF548-212ENST00000602086 EVA1CP58658 441 aa18.59■□□□□ 0.57
ZNF548-212ENST00000602086 C1orf141Q5JVX7 400 aa18.59■□□□□ 0.57
ZNF548-212ENST00000602086 TOM1L2Q6ZVM7 507 aa18.59■□□□□ 0.57
ZNF548-212ENST00000602086 IL17REQ8NFR9 667 aa18.59■□□□□ 0.57
ZNF548-212ENST00000602086 GJD4Q96KN9 370 aaPredicted RBP18.59■□□□□ 0.57
ZNF548-212ENST00000602086 VIRMAQ69YN4 1812 aaKnown RBP18.58■□□□□ 0.57
ZNF548-212ENST00000602086 NRAPQ86VF7 1730 aa18.58■□□□□ 0.57
ZNF548-212ENST00000602086 BTG4Q9NY30 223 aa18.58■□□□□ 0.56
ZNF548-212ENST00000602086 SOS1Q07889 1333 aaPredicted RBP18.57■□□□□ 0.56
ZNF548-212ENST00000602086 ALDH1L2Q3SY69 923 aa18.57■□□□□ 0.56
ZNF548-212ENST00000602086 BRPF1P55201 1214 aaPredicted RBP18.56■□□□□ 0.56
ZNF548-212ENST00000602086 TAF7Q15545 349 aaPredicted RBP18.56■□□□□ 0.56
ZNF548-212ENST00000602086 SCN11AQ9UI33 1791 aa18.55■□□□□ 0.56
ZNF548-212ENST00000602086 HSP90AB1P08238 724 aaKnown RBP18.55■□□□□ 0.56
ZNF548-212ENST00000602086 LARP1Q6PKG0 1096 aaKnown RBP18.55■□□□□ 0.56
ZNF548-212ENST00000602086 IFNL2Q8IZJ0 200 aa18.55■□□□□ 0.56
ZNF548-212ENST00000602086 LAS1LQ9Y4W2 734 aaKnown RBP18.55■□□□□ 0.56
ZNF548-212ENST00000602086 IL2RBP14784 551 aa18.54■□□□□ 0.56
ZNF548-212ENST00000602086 UNC5CLQ8IV45 518 aa18.54■□□□□ 0.56
ZNF548-212ENST00000602086 SIPA1L3O60292 1781 aaPredicted RBP18.54■□□□□ 0.56
ZNF548-212ENST00000602086 RNMTO43148 476 aaKnown RBP18.53■□□□□ 0.56
ZNF548-212ENST00000602086 VAMP4O75379 141 aa18.53■□□□□ 0.56
ZNF548-212ENST00000602086 PHKG2P15735 406 aa18.53■□□□□ 0.56
ZNF548-212ENST00000602086 STRN4Q9NRL3 753 aa18.53■□□□□ 0.56
ZNF548-212ENST00000602086 KDM3BQ7LBC6 1761 aa18.53■□□□□ 0.56
ZNF548-212ENST00000602086 DISP2A7MBM2 1401 aa18.52■□□□□ 0.56
ZNF548-212ENST00000602086 WNK3Q9BYP7 1800 aa18.52■□□□□ 0.56
ZNF548-212ENST00000602086 TSPYL4Q9UJ04 414 aa18.52■□□□□ 0.56
ZNF548-212ENST00000602086 MRC1P22897 1456 aa18.52■□□□□ 0.55
ZNF548-212ENST00000602086 PCDH11XQ9BZA7 1347 aa18.51■□□□□ 0.55
ZNF548-212ENST00000602086 PCDH11YQ9BZA8 1340 aa18.51■□□□□ 0.55
ZNF548-212ENST00000602086 BCAR3O75815 825 aa18.51■□□□□ 0.55
ZNF548-212ENST00000602086 PDE3AQ14432 1141 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms