RNA–Protein interactions for RNA: ENST00000601662.5

USE1-210, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 4

Gene USE1, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-210ENST00000601662 ACSBG1Q96GR2 724 aa19.39■□□□□ 0.69
USE1-210ENST00000601662 TATP17735 454 aaPredicted RBP19.38■□□□□ 0.69
USE1-210ENST00000601662 EIF4A2Q14240 407 aaKnown RBP19.38■□□□□ 0.69
USE1-210ENST00000601662 EZH2Q15910 746 aaKnown RBP19.38■□□□□ 0.69
USE1-210ENST00000601662 PTF1AQ7RTS3 328 aa19.38■□□□□ 0.69
USE1-210ENST00000601662 ZCRB1Q8TBF4 217 aaKnown RBP19.38■□□□□ 0.69
USE1-210ENST00000601662 KAT6BQ8WYB5 2073 aa19.38■□□□□ 0.69
USE1-210ENST00000601662 RGPD1P0DJD0 1748 aa19.37■□□□□ 0.69
USE1-210ENST00000601662 MTHFSP49914 203 aa19.37■□□□□ 0.69
USE1-210ENST00000601662 CFAP53Q96M91 514 aa19.37■□□□□ 0.69
USE1-210ENST00000601662 EYA1Q99502 592 aa19.37■□□□□ 0.69
USE1-210ENST00000601662 MEGF6O75095 1541 aa19.35■□□□□ 0.69
USE1-210ENST00000601662 KCNQ2O43526 872 aa19.35■□□□□ 0.69
USE1-210ENST00000601662 BCL11BQ9C0K0 894 aaPredicted RBP19.35■□□□□ 0.69
USE1-210ENST00000601662 CAMKK2Q96RR4 588 aa19.34■□□□□ 0.69
USE1-210ENST00000601662 MRS2Q9HD23 443 aa19.34■□□□□ 0.69
USE1-210ENST00000601662 TNS1Q9HBL0 1735 aaKnown RBP19.33■□□□□ 0.68
USE1-210ENST00000601662 SBF2Q86WG5 1849 aa19.3■□□□□ 0.68
USE1-210ENST00000601662 SYTL4Q96C24 671 aaPredicted RBP19.3■□□□□ 0.68
USE1-210ENST00000601662 BCL9O00512 1426 aa19.3■□□□□ 0.68
USE1-210ENST00000601662 PSDA5PKW4 1024 aaPredicted RBP19.28■□□□□ 0.68
USE1-210ENST00000601662 PRIM1P49642 420 aaKnown RBP19.27■□□□□ 0.68
USE1-210ENST00000601662 CCDC184Q52MB2 194 aa19.27■□□□□ 0.68
USE1-210ENST00000601662 SPG7Q9UQ90 795 aa19.27■□□□□ 0.68
USE1-210ENST00000601662 NUDCQ9Y266 331 aa19.27■□□□□ 0.68
USE1-210ENST00000601662 IGSF1Q8N6C5 1336 aa19.26■□□□□ 0.67
USE1-210ENST00000601662 PCDH11XQ9BZA7 1347 aa19.26■□□□□ 0.67
USE1-210ENST00000601662 PCDH11YQ9BZA8 1340 aa19.26■□□□□ 0.67
USE1-210ENST00000601662 PLSCR1O15162 318 aa19.26■□□□□ 0.67
USE1-210ENST00000601662 DIAPH1O60610 1272 aaKnown RBP19.26■□□□□ 0.67
USE1-210ENST00000601662 IL13P35225 146 aa19.26■□□□□ 0.67
USE1-210ENST00000601662 AEBP1Q8IUX7 1158 aa19.26■□□□□ 0.67
USE1-210ENST00000601662 CYP27B1O15528 508 aa19.25■□□□□ 0.67
USE1-210ENST00000601662 SULT6B1Q6IMI4 303 aa19.25■□□□□ 0.67
USE1-210ENST00000601662 R3HDM1Q15032 1099 aaKnown RBP19.24■□□□□ 0.67
USE1-210ENST00000601662 PNISRQ8TF01 805 aaKnown RBP19.24■□□□□ 0.67
USE1-210ENST00000601662 NCAPD2Q15021 1401 aa19.24■□□□□ 0.67
USE1-210ENST00000601662 WDR43Q15061 677 aaKnown RBP eCLIP19.23■□□□□ 0.67
USE1-210ENST00000601662 HMOX1P09601 288 aa19.22■□□□□ 0.67
USE1-210ENST00000601662 TXNRD1Q16881 649 aa19.22■□□□□ 0.67
USE1-210ENST00000601662 NBPF14Q5TI25 921 aa19.22■□□□□ 0.67
USE1-210ENST00000601662 PROM2Q8N271 834 aa19.22■□□□□ 0.67
USE1-210ENST00000601662 SHANK3Q9BYB0 1731 aa19.22■□□□□ 0.67
USE1-210ENST00000601662 PLEKHO1Q53GL0 409 aaPredicted RBP19.21■□□□□ 0.67
USE1-210ENST00000601662 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.21■□□□□ 0.67
USE1-210ENST00000601662 NHSQ6T4R5 1651 aa19.2■□□□□ 0.66
USE1-210ENST00000601662 U2SURPO15042 1029 aaKnown RBP19.2■□□□□ 0.66
USE1-210ENST00000601662 MPRIPQ6WCQ1 1025 aa19.19■□□□□ 0.66
USE1-210ENST00000601662 IFNL2Q8IZJ0 200 aa19.19■□□□□ 0.66
USE1-210ENST00000601662 FAM9BQ8IZU0 186 aa19.19■□□□□ 0.66
USE1-210ENST00000601662 PHKG2P15735 406 aa19.18■□□□□ 0.66
USE1-210ENST00000601662 ZNF530Q6P9A1 599 aaPredicted RBP19.18■□□□□ 0.66
USE1-210ENST00000601662 PNNQ9H307 717 aaKnown RBP19.18■□□□□ 0.66
USE1-210ENST00000601662 BTAF1O14981 1849 aa19.17■□□□□ 0.66
USE1-210ENST00000601662 DOT1LQ8TEK3 1739 aa19.17■□□□□ 0.66
USE1-210ENST00000601662 COL3A1P02461 1466 aaPredicted RBP19.16■□□□□ 0.66
USE1-210ENST00000601662 U2AF1L5P0DN76 240 aaPredicted RBP19.16■□□□□ 0.66
USE1-210ENST00000601662 U2AF1Q01081 240 aaKnown RBP eCLIP19.16■□□□□ 0.66
USE1-210ENST00000601662 AMOTQ4VCS5 1084 aa19.16■□□□□ 0.66
USE1-210ENST00000601662 PKD1L3Q7Z443 1732 aa19.16■□□□□ 0.66
USE1-210ENST00000601662 RREB1Q92766 1687 aa19.15■□□□□ 0.66
USE1-210ENST00000601662 KCNQ4P56696 695 aa19.15■□□□□ 0.66
USE1-210ENST00000601662 NKX1-1Q15270 411 aaPredicted RBP19.15■□□□□ 0.66
USE1-210ENST00000601662 ADAMTS8Q9UP79 889 aa19.15■□□□□ 0.66
USE1-210ENST00000601662 NUP188Q5SRE5 1749 aa19.14■□□□□ 0.66
USE1-210ENST00000601662 FCHSD2O94868 740 aa19.14■□□□□ 0.65
USE1-210ENST00000601662 C1orf141Q5JVX7 400 aa19.14■□□□□ 0.65
USE1-210ENST00000601662 ANO8Q9HCE9 1232 aaPredicted RBP19.14■□□□□ 0.65
USE1-210ENST00000601662 LRRC4BQ9NT99 713 aa19.13■□□□□ 0.65
USE1-210ENST00000601662 STK32BQ9NY57 414 aa19.13■□□□□ 0.65
USE1-210ENST00000601662 KDRP35968 1356 aa19.13■□□□□ 0.65
USE1-210ENST00000601662 PIGBQ92521 554 aa19.12■□□□□ 0.65
USE1-210ENST00000601662 TMOD3Q9NYL9 352 aa19.12■□□□□ 0.65
USE1-210ENST00000601662 HSP90AB1P08238 724 aaKnown RBP19.11■□□□□ 0.65
USE1-210ENST00000601662 RGPD3A6NKT7 1758 aaPredicted RBP19.11■□□□□ 0.65
USE1-210ENST00000601662 RGPD4Q7Z3J3 1758 aa19.11■□□□□ 0.65
USE1-210ENST00000601662 NEFMP07197 916 aa19.1■□□□□ 0.65
USE1-210ENST00000601662 CCNL1Q9UK58 526 aaPredicted RBP19.1■□□□□ 0.65
USE1-210ENST00000601662 SLC15A2Q16348 729 aa19.09■□□□□ 0.65
USE1-210ENST00000601662 SLC27A3Q5K4L6 730 aa19.09■□□□□ 0.65
USE1-210ENST00000601662 DCAF5Q96JK2 942 aa19.09■□□□□ 0.65
USE1-210ENST00000601662 PLEKHG2Q9H7P9 1386 aa19.08■□□□□ 0.65
USE1-210ENST00000601662 CABP4P57796 275 aa19.08■□□□□ 0.64
USE1-210ENST00000601662 MTHFSDQ2M296 383 aaKnown RBP19.08■□□□□ 0.64
USE1-210ENST00000601662 RUNDC1Q96C34 613 aa19.08■□□□□ 0.64
USE1-210ENST00000601662 TOGARAM1Q9Y4F4 1720 aa19.08■□□□□ 0.64
USE1-210ENST00000601662 SMARCC1Q92922 1105 aaPredicted RBP19.07■□□□□ 0.64
USE1-210ENST00000601662 PALLDQ8WX93 1383 aa19.06■□□□□ 0.64
USE1-210ENST00000601662 ERVV-2B6SEH9 535 aa19.06■□□□□ 0.64
USE1-210ENST00000601662 PRKAR2BP31323 418 aa19.06■□□□□ 0.64
USE1-210ENST00000601662 ZNF827Q17R98 1081 aa19.06■□□□□ 0.64
USE1-210ENST00000601662 AKAP4Q5JQC9 854 aa19.06■□□□□ 0.64
USE1-210ENST00000601662 PDGFDQ9GZP0 370 aaPredicted RBP19.06■□□□□ 0.64
USE1-210ENST00000601662 ASAP1Q9ULH1 1129 aa19.06■□□□□ 0.64
USE1-210ENST00000601662 ITGB4P16144 1822 aa19.06■□□□□ 0.64
USE1-210ENST00000601662 RSPH6AQ9H0K4 717 aa19.05■□□□□ 0.64
USE1-210ENST00000601662 KDM6AO15550 1401 aaPredicted RBP19.04■□□□□ 0.64
USE1-210ENST00000601662 SRCAPQ6ZRS2 3230 aa19.04■□□□□ 0.64
USE1-210ENST00000601662 NGEFQ8N5V2 710 aa19.04■□□□□ 0.64
USE1-210ENST00000601662 LGR6Q9HBX8 967 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms