RNA–Protein interactions for RNA: ENST00000601549.1

KCNN4-208, Transcript of potassium calcium-activated channel subfamily N member 4, humanhuman

TSL 3

Gene KCNN4, Length 1,093 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNN4-208ENST00000601549 PLEKHO1Q53GL0 409 aaPredicted RBP23.85■■□□□ 1.41
KCNN4-208ENST00000601549 YTHDC1Q96MU7 727 aaKnown RBP23.85■■□□□ 1.41
KCNN4-208ENST00000601549 STRN4Q9NRL3 753 aa23.85■■□□□ 1.41
KCNN4-208ENST00000601549 ATRNO75882 1429 aa23.84■■□□□ 1.41
KCNN4-208ENST00000601549 HTATSF1O43719 755 aaKnown RBP23.84■■□□□ 1.41
KCNN4-208ENST00000601549 LARP1Q6PKG0 1096 aaKnown RBP23.84■■□□□ 1.41
KCNN4-208ENST00000601549 RXRBP28702 533 aa23.83■■□□□ 1.41
KCNN4-208ENST00000601549 VPS72Q15906 364 aa23.83■■□□□ 1.41
KCNN4-208ENST00000601549 NRAPQ86VF7 1730 aa23.83■■□□□ 1.41
KCNN4-208ENST00000601549 RBM6P78332 1123 aaKnown RBP23.82■■□□□ 1.4
KCNN4-208ENST00000601549 CALD1Q05682 793 aaKnown RBP23.82■■□□□ 1.4
KCNN4-208ENST00000601549 PHACTR3Q96KR7 559 aa23.82■■□□□ 1.4
KCNN4-208ENST00000601549 CCDC9Q9Y3X0 531 aaKnown RBP23.82■■□□□ 1.4
KCNN4-208ENST00000601549 USHBP1Q8N6Y0 703 aa23.81■■□□□ 1.4
KCNN4-208ENST00000601549 SPG7Q9UQ90 795 aa23.81■■□□□ 1.4
KCNN4-208ENST00000601549 IL2RBP14784 551 aa23.8■■□□□ 1.4
KCNN4-208ENST00000601549 RIPK4P57078 832 aa23.8■■□□□ 1.4
KCNN4-208ENST00000601549 WDR63Q8IWG1 891 aa23.8■■□□□ 1.4
KCNN4-208ENST00000601549 UPF1Q92900 1129 aaKnown RBP eCLIP23.8■■□□□ 1.4
KCNN4-208ENST00000601549 OVOS2A0A0G2JMS6 1433 aa23.79■■□□□ 1.4
KCNN4-208ENST00000601549 GJD4Q96KN9 370 aaPredicted RBP23.79■■□□□ 1.4
KCNN4-208ENST00000601549 SPATA31A1Q5TZJ5 1347 aa23.79■■□□□ 1.4
KCNN4-208ENST00000601549 SPATA31A5Q5VU36 1347 aa23.79■■□□□ 1.4
KCNN4-208ENST00000601549 SPATA31A7Q8IWB4 1347 aa23.79■■□□□ 1.4
KCNN4-208ENST00000601549 ZNF521Q96K83 1311 aa23.79■■□□□ 1.4
KCNN4-208ENST00000601549 BARGINQ6ZT62 677 aa23.78■■□□□ 1.4
KCNN4-208ENST00000601549 WWC1Q8IX03 1113 aa23.77■■□□□ 1.4
KCNN4-208ENST00000601549 RGPD2P0DJD1 1756 aa23.77■■□□□ 1.4
KCNN4-208ENST00000601549 IL16Q14005 1332 aa23.77■■□□□ 1.4
KCNN4-208ENST00000601549 CENPBP07199 599 aaPredicted RBP23.76■■□□□ 1.39
KCNN4-208ENST00000601549 MTHFSDQ2M296 383 aaKnown RBP23.76■■□□□ 1.39
KCNN4-208ENST00000601549 PARP4Q9UKK3 1724 aaKnown RBP23.76■■□□□ 1.39
KCNN4-208ENST00000601549 AKAP4Q5JQC9 854 aa23.75■■□□□ 1.39
KCNN4-208ENST00000601549 DISP2A7MBM2 1401 aa23.75■■□□□ 1.39
KCNN4-208ENST00000601549 GNAT3A8MTJ3 354 aa23.74■■□□□ 1.39
KCNN4-208ENST00000601549 HSP90AB1P08238 724 aaKnown RBP23.74■■□□□ 1.39
KCNN4-208ENST00000601549 GOLGA2Q08379 1002 aa23.74■■□□□ 1.39
KCNN4-208ENST00000601549 RTF1Q92541 710 aaKnown RBP23.74■■□□□ 1.39
KCNN4-208ENST00000601549 MAP3K5Q99683 1374 aa23.74■■□□□ 1.39
KCNN4-208ENST00000601549 MEGF6O75095 1541 aa23.74■■□□□ 1.39
KCNN4-208ENST00000601549 C1orf141Q5JVX7 400 aa23.73■■□□□ 1.39
KCNN4-208ENST00000601549 TRIM35Q9UPQ4 493 aa23.73■■□□□ 1.39
KCNN4-208ENST00000601549 NEUROD2Q15784 382 aa23.72■■□□□ 1.39
KCNN4-208ENST00000601549 ZCRB1Q8TBF4 217 aaKnown RBP23.72■■□□□ 1.39
KCNN4-208ENST00000601549 PCDH11XQ9BZA7 1347 aa23.72■■□□□ 1.39
KCNN4-208ENST00000601549 PCDH11YQ9BZA8 1340 aa23.72■■□□□ 1.39
KCNN4-208ENST00000601549 PKD1L3Q7Z443 1732 aa23.71■■□□□ 1.39
KCNN4-208ENST00000601549 ZNF530Q6P9A1 599 aaPredicted RBP23.71■■□□□ 1.39
KCNN4-208ENST00000601549 IFNL2Q8IZJ0 200 aa23.71■■□□□ 1.39
KCNN4-208ENST00000601549 RRP7AQ9Y3A4 280 aaKnown RBP23.71■■□□□ 1.39
KCNN4-208ENST00000601549 E9PSI1 815 aa23.7■■□□□ 1.38
KCNN4-208ENST00000601549 GLI3P10071 1580 aa23.69■■□□□ 1.38
KCNN4-208ENST00000601549 BABAM1Q9NWV8 329 aa23.69■■□□□ 1.38
KCNN4-208ENST00000601549 MYH16Q9H6N6 1097 aa23.67■■□□□ 1.38
KCNN4-208ENST00000601549 USP35Q9P2H5 1018 aa23.67■■□□□ 1.38
KCNN4-208ENST00000601549 SALL2Q9Y467 1007 aaPredicted RBP23.67■■□□□ 1.38
KCNN4-208ENST00000601549 A0A0G2JS52 829 aa23.66■■□□□ 1.38
KCNN4-208ENST00000601549 EXOC5O00471 708 aa23.66■■□□□ 1.38
KCNN4-208ENST00000601549 PHKG2P15735 406 aa23.66■■□□□ 1.38
KCNN4-208ENST00000601549 MYT1Q01538 1121 aa23.66■■□□□ 1.38
KCNN4-208ENST00000601549 CEMIPQ8WUJ3 1361 aa23.65■■□□□ 1.38
KCNN4-208ENST00000601549 GNAI1P63096 354 aa23.65■■□□□ 1.38
KCNN4-208ENST00000601549 NKX1-1Q15270 411 aaPredicted RBP23.65■■□□□ 1.38
KCNN4-208ENST00000601549 FAM98CQ17RN3 349 aaKnown RBP23.65■■□□□ 1.38
KCNN4-208ENST00000601549 DCAF5Q96JK2 942 aa23.65■■□□□ 1.38
KCNN4-208ENST00000601549 IFT57Q9NWB7 429 aa23.65■■□□□ 1.38
KCNN4-208ENST00000601549 RGS12O14924 1447 aa23.65■■□□□ 1.38
KCNN4-208ENST00000601549 TNS2Q63HR2 1409 aa23.65■■□□□ 1.38
KCNN4-208ENST00000601549 ONECUT3O60422 494 aaPredicted RBP23.64■■□□□ 1.37
KCNN4-208ENST00000601549 SLFN5Q08AF3 891 aa23.64■■□□□ 1.37
KCNN4-208ENST00000601549 WNK3Q9BYP7 1800 aa23.63■■□□□ 1.37
KCNN4-208ENST00000601549 TRMT2AQ8IZ69 625 aaKnown RBP23.63■■□□□ 1.37
KCNN4-208ENST00000601549 DDB1Q16531 1140 aa23.62■■□□□ 1.37
KCNN4-208ENST00000601549 CFAP44Q96MT7 982 aa23.62■■□□□ 1.37
KCNN4-208ENST00000601549 CYP27B1O15528 508 aa23.61■■□□□ 1.37
KCNN4-208ENST00000601549 SEPT12Q8IYM1 358 aa23.61■■□□□ 1.37
KCNN4-208ENST00000601549 DLG5Q8TDM6 1919 aa23.61■■□□□ 1.37
KCNN4-208ENST00000601549 ADAMTS7Q9UKP4 1686 aa23.6■■□□□ 1.37
KCNN4-208ENST00000601549 RNMTO43148 476 aaKnown RBP23.59■■□□□ 1.37
KCNN4-208ENST00000601549 ZNF853P0CG23 659 aa23.59■■□□□ 1.37
KCNN4-208ENST00000601549 IL17REQ8NFR9 667 aa23.59■■□□□ 1.37
KCNN4-208ENST00000601549 ERVV-2B6SEH9 535 aa23.58■■□□□ 1.37
KCNN4-208ENST00000601549 CT47B1P0C2W7 299 aaPredicted RBP23.58■■□□□ 1.37
KCNN4-208ENST00000601549 LRRC37A3O60309 1634 aa23.58■■□□□ 1.36
KCNN4-208ENST00000601549 THSD7AQ9UPZ6 1657 aa23.57■■□□□ 1.36
KCNN4-208ENST00000601549 TEFQ10587 303 aa23.57■■□□□ 1.36
KCNN4-208ENST00000601549 TAF7Q15545 349 aaPredicted RBP23.57■■□□□ 1.36
KCNN4-208ENST00000601549 MCM10Q7L590 875 aa23.57■■□□□ 1.36
KCNN4-208ENST00000601549 CHL1O00533 1208 aa23.56■■□□□ 1.36
KCNN4-208ENST00000601549 DUSP27Q5VZP5 1158 aa23.56■■□□□ 1.36
KCNN4-208ENST00000601549 MRC1P22897 1456 aa23.55■■□□□ 1.36
KCNN4-208ENST00000601549 SENP3-EIF4A1A0A087X0R7 540 aa23.54■■□□□ 1.36
KCNN4-208ENST00000601549 MPRIPQ6WCQ1 1025 aa23.54■■□□□ 1.36
KCNN4-208ENST00000601549 CDCA7LQ96GN5 454 aa23.54■■□□□ 1.36
KCNN4-208ENST00000601549 SOS1Q07889 1333 aaPredicted RBP23.54■■□□□ 1.36
KCNN4-208ENST00000601549 DCTN1Q14203 1278 aa23.53■■□□□ 1.36
KCNN4-208ENST00000601549 KRT27Q7Z3Y8 459 aa23.53■■□□□ 1.36
KCNN4-208ENST00000601549 DDX54Q8TDD1 881 aaKnown RBP23.53■■□□□ 1.36
KCNN4-208ENST00000601549 BCL9O00512 1426 aa23.52■■□□□ 1.36
KCNN4-208ENST00000601549 KDM6AO15550 1401 aaPredicted RBP23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms