RNA–Protein interactions for RNA: ENST00000600343.5

NFKB1-212, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 2 BASIC

Gene NFKB1, Length 4,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-212ENST00000600343 OS9Q13438 667 aaPredicted RBP11.74□□□□□ -0.53
NFKB1-212ENST00000600343 CCDC183Q5T5S1 534 aa11.74□□□□□ -0.53
NFKB1-212ENST00000600343 SUGP1Q8IWZ8 645 aaKnown RBP11.74□□□□□ -0.53
NFKB1-212ENST00000600343 AK7Q96M32 723 aa11.74□□□□□ -0.53
NFKB1-212ENST00000600343 CLSTN1O94985 981 aa11.74□□□□□ -0.53
NFKB1-212ENST00000600343 AP5Z1O43299 807 aa11.73□□□□□ -0.53
NFKB1-212ENST00000600343 BIRC2Q13490 618 aa11.73□□□□□ -0.53
NFKB1-212ENST00000600343 EFCAB5A4FU69 1503 aa11.73□□□□□ -0.53
NFKB1-212ENST00000600343 LRMPQ12912 555 aa11.73□□□□□ -0.53
NFKB1-212ENST00000600343 PABPN1Q86U42 306 aaKnown RBP eCLIP11.73□□□□□ -0.53
NFKB1-212ENST00000600343 CALR3Q96L12 384 aaKnown RBP11.73□□□□□ -0.53
NFKB1-212ENST00000600343 EXOC6BQ9Y2D4 811 aa11.73□□□□□ -0.53
NFKB1-212ENST00000600343 CARMIL1Q5VZK9 1371 aa11.73□□□□□ -0.53
NFKB1-212ENST00000600343 ST18O60284 1047 aa11.72□□□□□ -0.53
NFKB1-212ENST00000600343 GADD45BO75293 160 aaPredicted RBP11.72□□□□□ -0.53
NFKB1-212ENST00000600343 SLU7O95391 586 aaKnown RBP11.72□□□□□ -0.53
NFKB1-212ENST00000600343 PPM1EQ8WY54 764 aa11.72□□□□□ -0.53
NFKB1-212ENST00000600343 TCOF1Q13428 1488 aaKnown RBP11.72□□□□□ -0.53
NFKB1-212ENST00000600343 CLCN6P51797 869 aa11.72□□□□□ -0.53
NFKB1-212ENST00000600343 CCDC186Q7Z3E2 898 aa11.72□□□□□ -0.53
NFKB1-212ENST00000600343 DRC7Q8IY82 874 aa11.72□□□□□ -0.53
NFKB1-212ENST00000600343 H2AFXP16104 143 aaPredicted RBP11.72□□□□□ -0.53
NFKB1-212ENST00000600343 SSR1P43307 286 aaKnown RBP11.72□□□□□ -0.53
NFKB1-212ENST00000600343 TPRNQ4KMQ1 711 aa11.72□□□□□ -0.53
NFKB1-212ENST00000600343 FOXD4L6Q3SYB3 417 aaPredicted RBP11.71□□□□□ -0.53
NFKB1-212ENST00000600343 FOXD4L3Q6VB84 417 aaPredicted RBP11.71□□□□□ -0.53
NFKB1-212ENST00000600343 IGF1RP08069 1367 aa11.71□□□□□ -0.53
NFKB1-212ENST00000600343 UHRF1BP1LA0JNW5 1464 aa11.71□□□□□ -0.53
NFKB1-212ENST00000600343 CCDC196A0A1B0GTZ2 297 aa11.71□□□□□ -0.53
NFKB1-212ENST00000600343 NUCB1Q02818 461 aa11.71□□□□□ -0.53
NFKB1-212ENST00000600343 DZIP1LQ8IYY4 767 aaKnown RBP11.71□□□□□ -0.53
NFKB1-212ENST00000600343 CFAP44Q96MT7 982 aa11.71□□□□□ -0.53
NFKB1-212ENST00000600343 GDPD2Q9HCC8 539 aa11.71□□□□□ -0.53
NFKB1-212ENST00000600343 MMS22LQ6ZRQ5 1243 aa11.71□□□□□ -0.54
NFKB1-212ENST00000600343 LMAN1P49257 510 aa11.7□□□□□ -0.54
NFKB1-212ENST00000600343 CEP89Q96ST8 783 aa11.7□□□□□ -0.54
NFKB1-212ENST00000600343 CHD1LQ86WJ1 897 aa11.7□□□□□ -0.54
NFKB1-212ENST00000600343 RGL3Q3MIN7 710 aa11.7□□□□□ -0.54
NFKB1-212ENST00000600343 ZKSCAN2Q63HK3 967 aa11.7□□□□□ -0.54
NFKB1-212ENST00000600343 TMCO3Q6UWJ1 677 aa11.7□□□□□ -0.54
NFKB1-212ENST00000600343 EIF3CLB5ME19 914 aaKnown RBP11.7□□□□□ -0.54
NFKB1-212ENST00000600343 SMARCA5O60264 1052 aaPredicted RBP11.7□□□□□ -0.54
NFKB1-212ENST00000600343 IVLP07476 585 aa11.7□□□□□ -0.54
NFKB1-212ENST00000600343 OAS2P29728 719 aaKnown RBP11.7□□□□□ -0.54
NFKB1-212ENST00000600343 TRDNQ13061 729 aa11.7□□□□□ -0.54
NFKB1-212ENST00000600343 NBPF9Q3BBW0 867 aa11.7□□□□□ -0.54
NFKB1-212ENST00000600343 LEKR1Q6ZMV7 388 aa11.7□□□□□ -0.54
NFKB1-212ENST00000600343 EIF3CQ99613 913 aaKnown RBP11.7□□□□□ -0.54
NFKB1-212ENST00000600343 KNSTRNQ9Y448 316 aa11.7□□□□□ -0.54
NFKB1-212ENST00000600343 MX1P20591 662 aa11.69□□□□□ -0.54
NFKB1-212ENST00000600343 PTPN14Q15678 1187 aa11.69□□□□□ -0.54
NFKB1-212ENST00000600343 ARGLU1Q9NWB6 273 aaPredicted RBP11.69□□□□□ -0.54
NFKB1-212ENST00000600343 ZBTB12Q9Y330 459 aaPredicted RBP11.69□□□□□ -0.54
NFKB1-212ENST00000600343 ABCC2Q92887 1545 aa11.69□□□□□ -0.54
NFKB1-212ENST00000600343 ERCC6LQ2NKX8 1250 aa11.69□□□□□ -0.54
NFKB1-212ENST00000600343 ITPRIPQ8IWB1 547 aa11.69□□□□□ -0.54
NFKB1-212ENST00000600343 UGGT2Q9NYU1 1516 aa11.69□□□□□ -0.54
NFKB1-212ENST00000600343 CDC45O75419 566 aa11.69□□□□□ -0.54
NFKB1-212ENST00000600343 ACTN2P35609 894 aa11.69□□□□□ -0.54
NFKB1-212ENST00000600343 NBPF11Q86T75 865 aa11.69□□□□□ -0.54
NFKB1-212ENST00000600343 USP48Q86UV5 1035 aa11.69□□□□□ -0.54
NFKB1-212ENST00000600343 IQUBQ8NA54 791 aa11.69□□□□□ -0.54
NFKB1-212ENST00000600343 ZCCHC17Q9NP64 241 aaKnown RBP11.69□□□□□ -0.54
NFKB1-212ENST00000600343 POLA1P09884 1462 aaPredicted RBP11.68□□□□□ -0.54
NFKB1-212ENST00000600343 ERBB3P21860 1342 aa11.68□□□□□ -0.54
NFKB1-212ENST00000600343 BRD1O95696 1058 aa11.68□□□□□ -0.54
NFKB1-212ENST00000600343 ZSCAN25Q6NSZ9 544 aa11.68□□□□□ -0.54
NFKB1-212ENST00000600343 NBPF10Q6P3W6 841 aaKnown RBP11.68□□□□□ -0.54
NFKB1-212ENST00000600343 EHBP1L1Q8N3D4 1523 aa11.68□□□□□ -0.54
NFKB1-212ENST00000600343 CCDC171Q6TFL3 1326 aa11.68□□□□□ -0.54
NFKB1-212ENST00000600343 USP26Q9BXU7 913 aa11.68□□□□□ -0.54
NFKB1-212ENST00000600343 DDX19BQ9UMR2 479 aa11.67□□□□□ -0.54
NFKB1-212ENST00000600343 DISP3Q9P2K9 1392 aa11.67□□□□□ -0.54
NFKB1-212ENST00000600343 SAMD9Q5K651 1589 aa11.67□□□□□ -0.54
NFKB1-212ENST00000600343 COL17A1Q9UMD9 1497 aaPredicted RBP11.67□□□□□ -0.54
NFKB1-212ENST00000600343 H0YHG0 523 aa11.67□□□□□ -0.54
NFKB1-212ENST00000600343 KIF3CO14782 793 aa11.67□□□□□ -0.54
NFKB1-212ENST00000600343 SARNPP82979 210 aaKnown RBP11.67□□□□□ -0.54
NFKB1-212ENST00000600343 MAP9Q49MG5 647 aa11.67□□□□□ -0.54
NFKB1-212ENST00000600343 TTLL5Q6EMB2 1281 aa11.67□□□□□ -0.54
NFKB1-212ENST00000600343 JMYQ8N9B5 988 aa11.67□□□□□ -0.54
NFKB1-212ENST00000600343 DNAAF4Q8WXU2 420 aa11.67□□□□□ -0.54
NFKB1-212ENST00000600343 PKD2Q13563 968 aa11.67□□□□□ -0.54
NFKB1-212ENST00000600343 PZPP20742 1482 aa11.66□□□□□ -0.54
NFKB1-212ENST00000600343 KIF2AO00139 706 aaPredicted RBP11.66□□□□□ -0.54
NFKB1-212ENST00000600343 NEUROD2Q15784 382 aa11.66□□□□□ -0.54
NFKB1-212ENST00000600343 ARHGAP29Q52LW3 1261 aa11.66□□□□□ -0.54
NFKB1-212ENST00000600343 EXOC4Q96A65 974 aa11.66□□□□□ -0.54
NFKB1-212ENST00000600343 MPHOSPH10O00566 681 aaKnown RBP11.66□□□□□ -0.54
NFKB1-212ENST00000600343 ZRANB2O95218 330 aaKnown RBP eCLIP11.66□□□□□ -0.54
NFKB1-212ENST00000600343 GIMAP6Q6P9H5 292 aa11.66□□□□□ -0.54
NFKB1-212ENST00000600343 NRBP1Q9UHY1 535 aa11.66□□□□□ -0.54
NFKB1-212ENST00000600343 GRIN2AQ12879 1464 aa11.66□□□□□ -0.54
NFKB1-212ENST00000600343 SNAPC4Q5SXM2 1469 aa11.66□□□□□ -0.54
NFKB1-212ENST00000600343 CFAP74Q9C0B2 1584 aa11.65□□□□□ -0.54
NFKB1-212ENST00000600343 TTC36A6NLP5 189 aa11.65□□□□□ -0.54
NFKB1-212ENST00000600343 MNAT1P51948 309 aa11.65□□□□□ -0.54
NFKB1-212ENST00000600343 REXO1L1PQ8IX06 675 aa11.65□□□□□ -0.54
NFKB1-212ENST00000600343 ZRSR1Q15695 479 aaKnown RBP11.65□□□□□ -0.54
NFKB1-212ENST00000600343 ANKRD45Q5TZF3 282 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms