RNA–Protein interactions for RNA: ENST00000599964.1

COPE-209, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 4

Gene COPE, Length 542 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-209ENST00000599964 THSD7AQ9UPZ6 1657 aa25.28■■□□□ 1.64
COPE-209ENST00000599964 MEGF6O75095 1541 aa25.27■■□□□ 1.64
COPE-209ENST00000599964 EXOC5O00471 708 aa25.27■■□□□ 1.64
COPE-209ENST00000599964 DDB1Q16531 1140 aa25.27■■□□□ 1.64
COPE-209ENST00000599964 PNISRQ8TF01 805 aaKnown RBP25.27■■□□□ 1.64
COPE-209ENST00000599964 OVOS2A0A0G2JMS6 1433 aa25.27■■□□□ 1.64
COPE-209ENST00000599964 SEPT12Q8IYM1 358 aa25.26■■□□□ 1.63
COPE-209ENST00000599964 RSPH6AQ9H0K4 717 aa25.26■■□□□ 1.63
COPE-209ENST00000599964 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.26■■□□□ 1.63
COPE-209ENST00000599964 SPG7Q9UQ90 795 aa25.26■■□□□ 1.63
COPE-209ENST00000599964 PRKAR2BP31323 418 aa25.25■■□□□ 1.63
COPE-209ENST00000599964 AMOTQ4VCS5 1084 aa25.25■■□□□ 1.63
COPE-209ENST00000599964 PLEKHO1Q53GL0 409 aaPredicted RBP25.25■■□□□ 1.63
COPE-209ENST00000599964 ZCRB1Q8TBF4 217 aaKnown RBP25.24■■□□□ 1.63
COPE-209ENST00000599964 ADAMTS8Q9UP79 889 aa25.24■■□□□ 1.63
COPE-209ENST00000599964 TNS2Q63HR2 1409 aa25.23■■□□□ 1.63
COPE-209ENST00000599964 PDE3BQ13370 1112 aa25.23■■□□□ 1.63
COPE-209ENST00000599964 LRRC37A3O60309 1634 aa25.23■■□□□ 1.63
COPE-209ENST00000599964 MAPK8IP3Q9UPT6 1336 aa25.22■■□□□ 1.63
COPE-209ENST00000599964 RGS12O14924 1447 aa25.21■■□□□ 1.63
COPE-209ENST00000599964 PKD1L3Q7Z443 1732 aa25.2■■□□□ 1.63
COPE-209ENST00000599964 PCDH11XQ9BZA7 1347 aa25.2■■□□□ 1.62
COPE-209ENST00000599964 PCDH11YQ9BZA8 1340 aa25.2■■□□□ 1.62
COPE-209ENST00000599964 FAM9BQ8IZU0 186 aa25.2■■□□□ 1.62
COPE-209ENST00000599964 KRT27Q7Z3Y8 459 aa25.17■■□□□ 1.62
COPE-209ENST00000599964 GAS2L2Q8NHY3 880 aa25.17■■□□□ 1.62
COPE-209ENST00000599964 RUNDC1Q96C34 613 aa25.17■■□□□ 1.62
COPE-209ENST00000599964 C1orf141Q5JVX7 400 aa25.16■■□□□ 1.62
COPE-209ENST00000599964 ZNF530Q6P9A1 599 aaPredicted RBP25.16■■□□□ 1.62
COPE-209ENST00000599964 DDX54Q8TDD1 881 aaKnown RBP25.16■■□□□ 1.62
COPE-209ENST00000599964 PLEKHF1Q96S99 279 aa25.16■■□□□ 1.62
COPE-209ENST00000599964 IFNL2Q8IZJ0 200 aa25.15■■□□□ 1.62
COPE-209ENST00000599964 CCDC146Q8IYE0 955 aa25.14■■□□□ 1.62
COPE-209ENST00000599964 PHACTR3Q96KR7 559 aa25.14■■□□□ 1.62
COPE-209ENST00000599964 BRWD3Q6RI45 1802 aa25.14■■□□□ 1.61
COPE-209ENST00000599964 MTHFSDQ2M296 383 aaKnown RBP25.13■■□□□ 1.61
COPE-209ENST00000599964 SHANK3Q9BYB0 1731 aa25.12■■□□□ 1.61
COPE-209ENST00000599964 HSP90AB1P08238 724 aaKnown RBP25.12■■□□□ 1.61
COPE-209ENST00000599964 PHKG2P15735 406 aa25.11■■□□□ 1.61
COPE-209ENST00000599964 AKAP4Q5JQC9 854 aa25.11■■□□□ 1.61
COPE-209ENST00000599964 MARCH10Q8NA82 808 aaPredicted RBP25.11■■□□□ 1.61
COPE-209ENST00000599964 CYP27B1O15528 508 aa25.1■■□□□ 1.61
COPE-209ENST00000599964 NFE2L2Q16236 605 aa25.09■■□□□ 1.61
COPE-209ENST00000599964 MAP3K5Q99683 1374 aa25.07■■□□□ 1.6
COPE-209ENST00000599964 GNAT3A8MTJ3 354 aa25.07■■□□□ 1.6
COPE-209ENST00000599964 NKX1-1Q15270 411 aaPredicted RBP25.06■■□□□ 1.6
COPE-209ENST00000599964 FAM196AQ6ZSG2 479 aa25.06■■□□□ 1.6
COPE-209ENST00000599964 RTF1Q92541 710 aaKnown RBP25.06■■□□□ 1.6
COPE-209ENST00000599964 DCAF5Q96JK2 942 aa25.06■■□□□ 1.6
COPE-209ENST00000599964 TMPOP42166 694 aaKnown RBP25.05■■□□□ 1.6
COPE-209ENST00000599964 LMOD3Q0VAK6 560 aa25.05■■□□□ 1.6
COPE-209ENST00000599964 BCL9O00512 1426 aa25.04■■□□□ 1.6
COPE-209ENST00000599964 APAF1O14727 1248 aa25.04■■□□□ 1.6
COPE-209ENST00000599964 HTATSF1O43719 755 aaKnown RBP25.04■■□□□ 1.6
COPE-209ENST00000599964 RIPK4P57078 832 aa25.03■■□□□ 1.6
COPE-209ENST00000599964 FAM182BQ5T319 152 aa25.03■■□□□ 1.6
COPE-209ENST00000599964 NEUROD2Q15784 382 aa25.01■■□□□ 1.59
COPE-209ENST00000599964 MPRIPQ6WCQ1 1025 aa25.01■■□□□ 1.59
COPE-209ENST00000599964 NGEFQ8N5V2 710 aa25■■□□□ 1.59
COPE-209ENST00000599964 RRP7AQ9Y3A4 280 aaKnown RBP25■■□□□ 1.59
COPE-209ENST00000599964 DLG5Q8TDM6 1919 aa24.99■■□□□ 1.59
COPE-209ENST00000599964 ERVV-2B6SEH9 535 aa24.98■■□□□ 1.59
COPE-209ENST00000599964 NCBP3Q53F19 620 aaKnown RBP24.98■■□□□ 1.59
COPE-209ENST00000599964 KDM6AO15550 1401 aaPredicted RBP24.97■■□□□ 1.59
COPE-209ENST00000599964 RNMTO43148 476 aaKnown RBP24.97■■□□□ 1.59
COPE-209ENST00000599964 SCN11AQ9UI33 1791 aa24.97■■□□□ 1.59
COPE-209ENST00000599964 DOT1LQ8TEK3 1739 aa24.97■■□□□ 1.59
COPE-209ENST00000599964 CABP4P57796 275 aa24.96■■□□□ 1.59
COPE-209ENST00000599964 SYTL4Q96C24 671 aaPredicted RBP24.96■■□□□ 1.59
COPE-209ENST00000599964 ADAMTS7Q9UKP4 1686 aa24.95■■□□□ 1.58
COPE-209ENST00000599964 TEFQ10587 303 aa24.95■■□□□ 1.58
COPE-209ENST00000599964 ACSBG1Q96GR2 724 aa24.95■■□□□ 1.58
COPE-209ENST00000599964 PRIM1P49642 420 aaKnown RBP24.94■■□□□ 1.58
COPE-209ENST00000599964 IL17REQ8NFR9 667 aa24.94■■□□□ 1.58
COPE-209ENST00000599964 LGR6Q9HBX8 967 aa24.94■■□□□ 1.58
COPE-209ENST00000599964 TMOD3Q9NYL9 352 aa24.94■■□□□ 1.58
COPE-209ENST00000599964 NHSQ6T4R5 1651 aa24.94■■□□□ 1.58
COPE-209ENST00000599964 VIRMAQ69YN4 1812 aaKnown RBP24.93■■□□□ 1.58
COPE-209ENST00000599964 CALD1Q05682 793 aaKnown RBP24.93■■□□□ 1.58
COPE-209ENST00000599964 CCDC27Q2M243 656 aa24.93■■□□□ 1.58
COPE-209ENST00000599964 MCM10Q7L590 875 aa24.93■■□□□ 1.58
COPE-209ENST00000599964 SBF2Q86WG5 1849 aa24.93■■□□□ 1.58
COPE-209ENST00000599964 CEMIPQ8WUJ3 1361 aa24.93■■□□□ 1.58
COPE-209ENST00000599964 TOGARAM1Q9Y4F4 1720 aa24.92■■□□□ 1.58
COPE-209ENST00000599964 BCL11BQ9C0K0 894 aaPredicted RBP24.92■■□□□ 1.58
COPE-209ENST00000599964 KAT6BQ8WYB5 2073 aa24.92■■□□□ 1.58
COPE-209ENST00000599964 DCTN1Q14203 1278 aa24.91■■□□□ 1.58
COPE-209ENST00000599964 SLC52A2Q9HAB3 445 aa24.91■■□□□ 1.58
COPE-209ENST00000599964 TRIM35Q9UPQ4 493 aa24.91■■□□□ 1.58
COPE-209ENST00000599964 TRIM37O94972 964 aa24.9■■□□□ 1.58
COPE-209ENST00000599964 ILDR2Q71H61 639 aa24.9■■□□□ 1.58
COPE-209ENST00000599964 ITGB4P16144 1822 aa24.9■■□□□ 1.58
COPE-209ENST00000599964 MRC1P22897 1456 aa24.89■■□□□ 1.58
COPE-209ENST00000599964 KCNQ2O43526 872 aa24.89■■□□□ 1.58
COPE-209ENST00000599964 NFATC2IPQ8NCF5 419 aa24.89■■□□□ 1.58
COPE-209ENST00000599964 SALL2Q9Y467 1007 aaPredicted RBP24.89■■□□□ 1.58
COPE-209ENST00000599964 SF3B2Q13435 895 aaKnown RBP24.88■■□□□ 1.57
COPE-209ENST00000599964 CCDC125Q86Z20 511 aa24.88■■□□□ 1.57
COPE-209ENST00000599964 SENP3-EIF4A1A0A087X0R7 540 aa24.87■■□□□ 1.57
COPE-209ENST00000599964 HNRNPUQ00839 825 aaKnown RBP eCLIP24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms