RNA–Protein interactions for RNA: ENST00000599642.1

KHSRP-211, Transcript of KH-type splicing regulatory protein, humanhuman

TSL 2

Gene KHSRP, Length 428 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHSRP-211ENST00000599642 PLEKHO1Q53GL0 409 aaPredicted RBP24.55■■□□□ 1.52
KHSRP-211ENST00000599642 GAS2L2Q8NHY3 880 aa24.55■■□□□ 1.52
KHSRP-211ENST00000599642 GLI3P10071 1580 aa24.54■■□□□ 1.52
KHSRP-211ENST00000599642 THSD7AQ9UPZ6 1657 aa24.54■■□□□ 1.52
KHSRP-211ENST00000599642 ONECUT3O60422 494 aaPredicted RBP24.54■■□□□ 1.52
KHSRP-211ENST00000599642 SPG7Q9UQ90 795 aa24.54■■□□□ 1.52
KHSRP-211ENST00000599642 DLG5Q8TDM6 1919 aa24.54■■□□□ 1.52
KHSRP-211ENST00000599642 MEGF6O75095 1541 aa24.53■■□□□ 1.52
KHSRP-211ENST00000599642 USHBP1Q8N6Y0 703 aa24.53■■□□□ 1.52
KHSRP-211ENST00000599642 QTRT2Q9H974 415 aaKnown RBP24.53■■□□□ 1.52
KHSRP-211ENST00000599642 CCDC9Q9Y3X0 531 aaKnown RBP24.53■■□□□ 1.52
KHSRP-211ENST00000599642 SHANK3Q9BYB0 1731 aa24.51■■□□□ 1.51
KHSRP-211ENST00000599642 HTATSF1O43719 755 aaKnown RBP24.5■■□□□ 1.51
KHSRP-211ENST00000599642 RBM6P78332 1123 aaKnown RBP24.49■■□□□ 1.51
KHSRP-211ENST00000599642 LMOD3Q0VAK6 560 aa24.49■■□□□ 1.51
KHSRP-211ENST00000599642 CCDC27Q2M243 656 aa24.49■■□□□ 1.51
KHSRP-211ENST00000599642 LRRC37A3O60309 1634 aa24.49■■□□□ 1.51
KHSRP-211ENST00000599642 VIRMAQ69YN4 1812 aaKnown RBP24.49■■□□□ 1.51
KHSRP-211ENST00000599642 NFE2L2Q16236 605 aa24.48■■□□□ 1.51
KHSRP-211ENST00000599642 TNS2Q63HR2 1409 aa24.48■■□□□ 1.51
KHSRP-211ENST00000599642 ZCRB1Q8TBF4 217 aaKnown RBP24.48■■□□□ 1.51
KHSRP-211ENST00000599642 PCDH11XQ9BZA7 1347 aa24.48■■□□□ 1.51
KHSRP-211ENST00000599642 PCDH11YQ9BZA8 1340 aa24.48■■□□□ 1.51
KHSRP-211ENST00000599642 USP35Q9P2H5 1018 aa24.48■■□□□ 1.51
KHSRP-211ENST00000599642 TMPOP42166 694 aaKnown RBP24.47■■□□□ 1.51
KHSRP-211ENST00000599642 PHF23Q9BUL5 403 aaPredicted RBP24.47■■□□□ 1.51
KHSRP-211ENST00000599642 ADAMTS7Q9UKP4 1686 aa24.46■■□□□ 1.51
KHSRP-211ENST00000599642 EXOC5O00471 708 aa24.46■■□□□ 1.51
KHSRP-211ENST00000599642 HSP90AB1P08238 724 aaKnown RBP24.46■■□□□ 1.51
KHSRP-211ENST00000599642 AKAP4Q5JQC9 854 aa24.46■■□□□ 1.51
KHSRP-211ENST00000599642 CCDC146Q8IYE0 955 aa24.46■■□□□ 1.51
KHSRP-211ENST00000599642 PHACTR3Q96KR7 559 aa24.46■■□□□ 1.51
KHSRP-211ENST00000599642 APAF1O14727 1248 aa24.45■■□□□ 1.5
KHSRP-211ENST00000599642 MTHFSDQ2M296 383 aaKnown RBP24.45■■□□□ 1.5
KHSRP-211ENST00000599642 IFNL2Q8IZJ0 200 aa24.44■■□□□ 1.5
KHSRP-211ENST00000599642 SCN11AQ9UI33 1791 aa24.44■■□□□ 1.5
KHSRP-211ENST00000599642 DDB1Q16531 1140 aa24.43■■□□□ 1.5
KHSRP-211ENST00000599642 C1orf141Q5JVX7 400 aa24.43■■□□□ 1.5
KHSRP-211ENST00000599642 MAP3K5Q99683 1374 aa24.42■■□□□ 1.5
KHSRP-211ENST00000599642 GNAT3A8MTJ3 354 aa24.41■■□□□ 1.5
KHSRP-211ENST00000599642 RXRBP28702 533 aa24.41■■□□□ 1.5
KHSRP-211ENST00000599642 RIPK4P57078 832 aa24.41■■□□□ 1.5
KHSRP-211ENST00000599642 NKX1-1Q15270 411 aaPredicted RBP24.41■■□□□ 1.5
KHSRP-211ENST00000599642 FAM98CQ17RN3 349 aaKnown RBP24.41■■□□□ 1.5
KHSRP-211ENST00000599642 RGS17Q9UGC6 210 aaPredicted RBP24.41■■□□□ 1.5
KHSRP-211ENST00000599642 CALD1Q05682 793 aaKnown RBP24.4■■□□□ 1.5
KHSRP-211ENST00000599642 ZNF530Q6P9A1 599 aaPredicted RBP24.4■■□□□ 1.5
KHSRP-211ENST00000599642 BCL9O00512 1426 aa24.39■■□□□ 1.5
KHSRP-211ENST00000599642 PHKG2P15735 406 aa24.39■■□□□ 1.49
KHSRP-211ENST00000599642 RTF1Q92541 710 aaKnown RBP24.38■■□□□ 1.49
KHSRP-211ENST00000599642 ZBED9Q6R2W3 1325 aa24.37■■□□□ 1.49
KHSRP-211ENST00000599642 DCAF5Q96JK2 942 aa24.37■■□□□ 1.49
KHSRP-211ENST00000599642 HNRNPUQ00839 825 aaKnown RBP eCLIP24.36■■□□□ 1.49
KHSRP-211ENST00000599642 WDR63Q8IWG1 891 aa24.36■■□□□ 1.49
KHSRP-211ENST00000599642 CEMIPQ8WUJ3 1361 aa24.35■■□□□ 1.49
KHSRP-211ENST00000599642 CYP27B1O15528 508 aa24.35■■□□□ 1.49
KHSRP-211ENST00000599642 BRWD3Q6RI45 1802 aa24.35■■□□□ 1.49
KHSRP-211ENST00000599642 IL16Q14005 1332 aa24.35■■□□□ 1.49
KHSRP-211ENST00000599642 PDE3BQ13370 1112 aa24.34■■□□□ 1.49
KHSRP-211ENST00000599642 WWC1Q8IX03 1113 aa24.34■■□□□ 1.49
KHSRP-211ENST00000599642 SEPT12Q8IYM1 358 aa24.34■■□□□ 1.49
KHSRP-211ENST00000599642 TRIM35Q9UPQ4 493 aa24.34■■□□□ 1.49
KHSRP-211ENST00000599642 SIPA1L3O60292 1781 aaPredicted RBP24.34■■□□□ 1.49
KHSRP-211ENST00000599642 ZNF521Q96K83 1311 aa24.34■■□□□ 1.49
KHSRP-211ENST00000599642 BABAM1Q9NWV8 329 aa24.33■■□□□ 1.49
KHSRP-211ENST00000599642 MRC1P22897 1456 aa24.32■■□□□ 1.48
KHSRP-211ENST00000599642 ERVV-2B6SEH9 535 aa24.32■■□□□ 1.48
KHSRP-211ENST00000599642 NEUROD2Q15784 382 aa24.31■■□□□ 1.48
KHSRP-211ENST00000599642 POTEAQ6S8J7 498 aa24.31■■□□□ 1.48
KHSRP-211ENST00000599642 ITGB4P16144 1822 aa24.29■■□□□ 1.48
KHSRP-211ENST00000599642 A0A0G2JS52 829 aa24.29■■□□□ 1.48
KHSRP-211ENST00000599642 RNMTO43148 476 aaKnown RBP24.29■■□□□ 1.48
KHSRP-211ENST00000599642 MYT1Q01538 1121 aa24.29■■□□□ 1.48
KHSRP-211ENST00000599642 DDX54Q8TDD1 881 aaKnown RBP24.29■■□□□ 1.48
KHSRP-211ENST00000599642 RRP7AQ9Y3A4 280 aaKnown RBP24.29■■□□□ 1.48
KHSRP-211ENST00000599642 KDM6AO15550 1401 aaPredicted RBP24.28■■□□□ 1.48
KHSRP-211ENST00000599642 SBF2Q86WG5 1849 aa24.28■■□□□ 1.48
KHSRP-211ENST00000599642 MARCH10Q8NA82 808 aaPredicted RBP24.27■■□□□ 1.48
KHSRP-211ENST00000599642 IL17REQ8NFR9 667 aa24.27■■□□□ 1.48
KHSRP-211ENST00000599642 DOT1LQ8TEK3 1739 aa24.27■■□□□ 1.48
KHSRP-211ENST00000599642 TOGARAM1Q9Y4F4 1720 aa24.27■■□□□ 1.48
KHSRP-211ENST00000599642 GOLGA2Q08379 1002 aa24.26■■□□□ 1.47
KHSRP-211ENST00000599642 RGS12O14924 1447 aa24.26■■□□□ 1.47
KHSRP-211ENST00000599642 KRT27Q7Z3Y8 459 aa24.25■■□□□ 1.47
KHSRP-211ENST00000599642 GNAI1P63096 354 aa24.24■■□□□ 1.47
KHSRP-211ENST00000599642 TEFQ10587 303 aa24.24■■□□□ 1.47
KHSRP-211ENST00000599642 MPRIPQ6WCQ1 1025 aa24.24■■□□□ 1.47
KHSRP-211ENST00000599642 CFAP44Q96MT7 982 aa24.24■■□□□ 1.47
KHSRP-211ENST00000599642 IFT57Q9NWB7 429 aa24.24■■□□□ 1.47
KHSRP-211ENST00000599642 NHSQ6T4R5 1651 aa24.24■■□□□ 1.47
KHSRP-211ENST00000599642 E9PSI1 815 aa24.23■■□□□ 1.47
KHSRP-211ENST00000599642 TAF7Q15545 349 aaPredicted RBP24.23■■□□□ 1.47
KHSRP-211ENST00000599642 FAM196AQ6ZSG2 479 aa24.23■■□□□ 1.47
KHSRP-211ENST00000599642 SLC52A2Q9HAB3 445 aa24.23■■□□□ 1.47
KHSRP-211ENST00000599642 KDM3BQ7LBC6 1761 aa24.23■■□□□ 1.47
KHSRP-211ENST00000599642 MCM10Q7L590 875 aa24.22■■□□□ 1.47
KHSRP-211ENST00000599642 ZNF853P0CG23 659 aa24.21■■□□□ 1.47
KHSRP-211ENST00000599642 LGR6Q9HBX8 967 aa24.21■■□□□ 1.47
KHSRP-211ENST00000599642 KAT6BQ8WYB5 2073 aa24.2■■□□□ 1.47
KHSRP-211ENST00000599642 CABP4P57796 275 aa24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 160.5 ms