RNA–Protein interactions for RNA: ENST00000598860.1

SMG9-207, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-207ENST00000598860 E9PCH4 1651 aa15.14■□□□□ 0.01
SMG9-207ENST00000598860 KDM4AO75164 1064 aa15.13■□□□□ 0.01
SMG9-207ENST00000598860 FUT2Q10981 343 aa15.13■□□□□ 0.01
SMG9-207ENST00000598860 NUTM1Q86Y26 1132 aa15.13■□□□□ 0.01
SMG9-207ENST00000598860 RSPH6AQ9H0K4 717 aa15.13■□□□□ 0.01
SMG9-207ENST00000598860 DHX57Q6P158 1386 aaKnown RBP15.12■□□□□ 0.01
SMG9-207ENST00000598860 FLIIQ13045 1269 aa15.12■□□□□ 0.01
SMG9-207ENST00000598860 SPHKAPQ2M3C7 1700 aa15.12■□□□□ 0.01
SMG9-207ENST00000598860 SKIV2LQ15477 1246 aaKnown RBP15.11■□□□□ 0.01
SMG9-207ENST00000598860 PCDHB3Q9Y5E6 796 aa15.11■□□□□ 0.01
SMG9-207ENST00000598860 RPRD2Q5VT52 1461 aaKnown RBP15.11■□□□□ 0.01
SMG9-207ENST00000598860 IDI1Q13907 227 aa15.1■□□□□ 0.01
SMG9-207ENST00000598860 SPIRE2Q8WWL2 714 aa15.1■□□□□ 0.01
SMG9-207ENST00000598860 MPHOSPH9Q99550 1183 aa15.1■□□□□ 0.01
SMG9-207ENST00000598860 PUS10Q3MIT2 529 aaKnown RBP15.09■□□□□ 0.01
SMG9-207ENST00000598860 ATP6V1AP38606 617 aa15.08■□□□□ 0
SMG9-207ENST00000598860 SLC52A1Q9NWF4 448 aa15.08■□□□□ 0
SMG9-207ENST00000598860 CLSPNQ9HAW4 1339 aa15.08■□□□□ 0
SMG9-207ENST00000598860 COPS2P61201 443 aa15.07■□□□□ 0
SMG9-207ENST00000598860 TXNDC2Q86VQ3 553 aa15.07■□□□□ 0
SMG9-207ENST00000598860 TBC1D2Q9BYX2 928 aa15.07■□□□□ 0
SMG9-207ENST00000598860 EID1Q9Y6B2 187 aa15.07■□□□□ 0
SMG9-207ENST00000598860 ZNF335Q9H4Z2 1342 aaPredicted RBP15.07■□□□□ 0
SMG9-207ENST00000598860 NOS1P29475 1434 aa15.07■□□□□ 0
SMG9-207ENST00000598860 POLR1AO95602 1720 aaPredicted RBP15.06■□□□□ 0
SMG9-207ENST00000598860 USP46P62068 366 aa15.06■□□□□ 0
SMG9-207ENST00000598860 BLOC1S3Q6QNY0 202 aa15.06■□□□□ 0
SMG9-207ENST00000598860 UBR1Q8IWV7 1749 aa15.06■□□□□ 0
SMG9-207ENST00000598860 GRIPAP1Q4V328 841 aa15.05■□□□□ -0
SMG9-207ENST00000598860 MTRQ99707 1265 aa15.05■□□□□ -0
SMG9-207ENST00000598860 NPHP4O75161 1426 aaPredicted RBP15.05■□□□□ -0
SMG9-207ENST00000598860 LTBP4Q8N2S1 1624 aa15.05■□□□□ -0
SMG9-207ENST00000598860 NEURL4Q96JN8 1562 aa15.04■□□□□ -0
SMG9-207ENST00000598860 MED14O60244 1454 aa15.04■□□□□ -0
SMG9-207ENST00000598860 HOXA2O43364 376 aa15.04■□□□□ -0
SMG9-207ENST00000598860 LTKP29376 864 aa15.04■□□□□ -0
SMG9-207ENST00000598860 DIXDC1Q155Q3 683 aa15.04■□□□□ -0
SMG9-207ENST00000598860 PIK3C2BO00750 1634 aa15.03■□□□□ -0
SMG9-207ENST00000598860 TRPM2O94759 1503 aa15.03■□□□□ -0
SMG9-207ENST00000598860 MORN1Q5T089 497 aa15.03■□□□□ -0
SMG9-207ENST00000598860 MYSM1Q5VVJ2 828 aa15.03■□□□□ -0
SMG9-207ENST00000598860 HOMEZQ8IX15 550 aa15.03■□□□□ -0
SMG9-207ENST00000598860 HLA-CQ95604 372 aa15.03■□□□□ -0
SMG9-207ENST00000598860 POLR3EQ9NVU0 708 aa15.03■□□□□ -0
SMG9-207ENST00000598860 KIF1BO60333 1816 aa15.03■□□□□ -0
SMG9-207ENST00000598860 SYNMO15061 1565 aa15.02■□□□□ -0
SMG9-207ENST00000598860 TMEM2Q9UHN6 1383 aa15.02■□□□□ -0
SMG9-207ENST00000598860 TJAP1Q5JTD0 557 aa15.02■□□□□ -0
SMG9-207ENST00000598860 PROCA1Q8NCQ7 364 aaPredicted RBP15.02■□□□□ -0
SMG9-207ENST00000598860 CCER1Q8TC90 406 aaPredicted RBP15.02■□□□□ -0
SMG9-207ENST00000598860 SCAF11Q99590 1463 aaKnown RBP15.01□□□□□ -0.01
SMG9-207ENST00000598860 MOXD2PA6NHM9 499 aa15.01□□□□□ -0.01
SMG9-207ENST00000598860 SLIT1O75093 1534 aa15.01□□□□□ -0.01
SMG9-207ENST00000598860 ARHGAP23Q9P227 1491 aa15.01□□□□□ -0.01
SMG9-207ENST00000598860 NDUFV2P19404 249 aa15□□□□□ -0.01
SMG9-207ENST00000598860 GUCA2AQ02747 115 aa15□□□□□ -0.01
SMG9-207ENST00000598860 IL21Q9HBE4 155 aa15□□□□□ -0.01
SMG9-207ENST00000598860 KDM5AP29375 1690 aaKnown RBP15□□□□□ -0.01
SMG9-207ENST00000598860 ANKRD30BQ9BXX2 1392 aa14.99□□□□□ -0.01
SMG9-207ENST00000598860 IQGAP1P46940 1657 aa14.99□□□□□ -0.01
SMG9-207ENST00000598860 IQSEC2Q5JU85 1478 aa14.98□□□□□ -0.01
SMG9-207ENST00000598860 NR1I2O75469 434 aa14.98□□□□□ -0.01
SMG9-207ENST00000598860 CLK2P49760 499 aaKnown RBP14.98□□□□□ -0.01
SMG9-207ENST00000598860 SCUBE3Q8IX30 993 aa14.98□□□□□ -0.01
SMG9-207ENST00000598860 ZNF516Q92618 1163 aa14.98□□□□□ -0.01
SMG9-207ENST00000598860 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.98□□□□□ -0.01
SMG9-207ENST00000598860 SLC27A5Q9Y2P5 690 aa14.98□□□□□ -0.01
SMG9-207ENST00000598860 CLTCL1P53675 1640 aa14.97□□□□□ -0.01
SMG9-207ENST00000598860 MCM6Q14566 821 aa14.97□□□□□ -0.01
SMG9-207ENST00000598860 CCDC144AA2RUR9 1427 aa14.96□□□□□ -0.01
SMG9-207ENST00000598860 ITGBL1O95965 494 aaPredicted RBP14.96□□□□□ -0.01
SMG9-207ENST00000598860 FDX1P10109 184 aa14.96□□□□□ -0.01
SMG9-207ENST00000598860 ADGRB3O60242 1522 aa14.96□□□□□ -0.02
SMG9-207ENST00000598860 ZPR1O75312 459 aa14.95□□□□□ -0.02
SMG9-207ENST00000598860 KCNC4Q03721 635 aa14.95□□□□□ -0.02
SMG9-207ENST00000598860 RIC3Q7Z5B4 369 aa14.95□□□□□ -0.02
SMG9-207ENST00000598860 CPS1P31327 1500 aa14.95□□□□□ -0.02
SMG9-207ENST00000598860 UBAP1LF5GYI3 381 aa14.94□□□□□ -0.02
SMG9-207ENST00000598860 PPP1R15AO75807 674 aaPredicted RBP14.94□□□□□ -0.02
SMG9-207ENST00000598860 RSBN1LQ6PCB5 846 aaPredicted RBP14.94□□□□□ -0.02
SMG9-207ENST00000598860 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.94□□□□□ -0.02
SMG9-207ENST00000598860 MYO5BQ9ULV0 1848 aa14.93□□□□□ -0.02
SMG9-207ENST00000598860 RIMS2Q9UQ26 1411 aa14.92□□□□□ -0.02
SMG9-207ENST00000598860 TMEM131LA2VDJ0 1609 aa14.92□□□□□ -0.02
SMG9-207ENST00000598860 SPTLC1O15269 473 aa14.92□□□□□ -0.02
SMG9-207ENST00000598860 SLC26A8Q96RN1 970 aa14.92□□□□□ -0.02
SMG9-207ENST00000598860 LIMD1Q9UGP4 676 aa14.92□□□□□ -0.02
SMG9-207ENST00000598860 PCDHGC3Q9UN70 934 aa14.92□□□□□ -0.02
SMG9-207ENST00000598860 TLL1O43897 1013 aa14.91□□□□□ -0.02
SMG9-207ENST00000598860 RNF19BQ6ZMZ0 732 aa14.9□□□□□ -0.02
SMG9-207ENST00000598860 CLUAP1Q96AJ1 413 aa14.9□□□□□ -0.02
SMG9-207ENST00000598860 PLA2G2EQ9NZK7 142 aa14.9□□□□□ -0.02
SMG9-207ENST00000598860 TOM1O60784 492 aa14.89□□□□□ -0.03
SMG9-207ENST00000598860 GJA5P36382 358 aa14.89□□□□□ -0.03
SMG9-207ENST00000598860 CSPP1Q1MSJ5 1256 aa14.89□□□□□ -0.03
SMG9-207ENST00000598860 Q3C1V9 767 aa14.89□□□□□ -0.03
SMG9-207ENST00000598860 NUTM2DQ5VT03 806 aaPredicted RBP14.89□□□□□ -0.03
SMG9-207ENST00000598860 NKX2-3Q8TAU0 364 aa14.89□□□□□ -0.03
SMG9-207ENST00000598860 PCDHB15Q9Y5E8 787 aa14.89□□□□□ -0.03
SMG9-207ENST00000598860 ZFYVE9O95405 1425 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms