RNA–Protein interactions for RNA: ENST00000598772.1

HERC3-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 326 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-213ENST00000598772 ITGAEP38570 1179 aa6.72□□□□□ -1.33
HERC3-213ENST00000598772 CLTCL1P53675 1640 aa6.72□□□□□ -1.33
HERC3-213ENST00000598772 PHRF1Q9P1Y6 1649 aaKnown RBP6.72□□□□□ -1.33
HERC3-213ENST00000598772 VEGFAP15692 232 aaPredicted RBP6.71□□□□□ -1.34
HERC3-213ENST00000598772 VEGFBP49765 207 aa6.71□□□□□ -1.34
HERC3-213ENST00000598772 PRPF38BQ5VTL8 546 aaKnown RBP6.71□□□□□ -1.34
HERC3-213ENST00000598772 CHADLQ6NUI6 762 aa6.71□□□□□ -1.34
HERC3-213ENST00000598772 FAM163AQ96GL9 167 aaPredicted RBP6.71□□□□□ -1.34
HERC3-213ENST00000598772 WBP1LQ9NX94 342 aa6.71□□□□□ -1.34
HERC3-213ENST00000598772 CCNL1Q9UK58 526 aaPredicted RBP6.71□□□□□ -1.34
HERC3-213ENST00000598772 ALS2Q96Q42 1657 aa6.71□□□□□ -1.34
HERC3-213ENST00000598772 SOX12O15370 315 aa6.7□□□□□ -1.34
HERC3-213ENST00000598772 DDX54Q8TDD1 881 aaKnown RBP6.7□□□□□ -1.34
HERC3-213ENST00000598772 CREBZFQ9NS37 354 aa6.7□□□□□ -1.34
HERC3-213ENST00000598772 COL5A2P05997 1499 aaPredicted RBP6.7□□□□□ -1.34
HERC3-213ENST00000598772 PRR36Q9H6K5 1346 aa6.7□□□□□ -1.34
HERC3-213ENST00000598772 TRPM3Q9HCF6 1732 aaPredicted RBP6.7□□□□□ -1.34
HERC3-213ENST00000598772 LRRC37A3O60309 1634 aa6.69□□□□□ -1.34
HERC3-213ENST00000598772 YTHDC2Q9H6S0 1430 aaKnown RBP6.69□□□□□ -1.34
HERC3-213ENST00000598772 PHF14O94880 888 aa6.69□□□□□ -1.34
HERC3-213ENST00000598772 SOX10P56693 466 aa6.69□□□□□ -1.34
HERC3-213ENST00000598772 NLRP13Q86W25 1043 aa6.69□□□□□ -1.34
HERC3-213ENST00000598772 CDAN1Q8IWY9 1227 aa6.69□□□□□ -1.34
HERC3-213ENST00000598772 BEGAINQ9BUH8 593 aa6.69□□□□□ -1.34
HERC3-213ENST00000598772 TSKSQ9UJT2 592 aa6.69□□□□□ -1.34
HERC3-213ENST00000598772 IFT172Q9UG01 1749 aa6.69□□□□□ -1.34
HERC3-213ENST00000598772 BCL9O00512 1426 aa6.68□□□□□ -1.34
HERC3-213ENST00000598772 AKAP12Q02952 1782 aa6.68□□□□□ -1.34
HERC3-213ENST00000598772 PRIM1P49642 420 aaKnown RBP6.68□□□□□ -1.34
HERC3-213ENST00000598772 CLCN6P51797 869 aa6.68□□□□□ -1.34
HERC3-213ENST00000598772 GRM1Q13255 1194 aa6.68□□□□□ -1.34
HERC3-213ENST00000598772 SIRT1Q96EB6 747 aa6.68□□□□□ -1.34
HERC3-213ENST00000598772 CARD10Q9BWT7 1032 aa6.68□□□□□ -1.34
HERC3-213ENST00000598772 MCOLN1Q9GZU1 580 aa6.68□□□□□ -1.34
HERC3-213ENST00000598772 AXIN2Q9Y2T1 843 aa6.68□□□□□ -1.34
HERC3-213ENST00000598772 KIF1BO60333 1816 aa6.68□□□□□ -1.34
HERC3-213ENST00000598772 WDR17Q8IZU2 1322 aa6.68□□□□□ -1.34
HERC3-213ENST00000598772 PAPPAQ13219 1627 aa6.68□□□□□ -1.34
HERC3-213ENST00000598772 PLEKHG2Q9H7P9 1386 aa6.68□□□□□ -1.34
HERC3-213ENST00000598772 ANKARQ7Z5J8 1434 aa6.67□□□□□ -1.34
HERC3-213ENST00000598772 POTEJP0CG39 1038 aa6.67□□□□□ -1.34
HERC3-213ENST00000598772 PAXIP1Q6ZW49 1069 aaPredicted RBP6.67□□□□□ -1.34
HERC3-213ENST00000598772 FLAD1Q8NFF5 587 aa6.67□□□□□ -1.34
HERC3-213ENST00000598772 NUDT16Q96DE0 195 aaKnown RBP6.67□□□□□ -1.34
HERC3-213ENST00000598772 TRAK1Q9UPV9 953 aa6.67□□□□□ -1.34
HERC3-213ENST00000598772 CPDO75976 1380 aa6.67□□□□□ -1.34
HERC3-213ENST00000598772 CNTNAP1P78357 1384 aa6.67□□□□□ -1.34
HERC3-213ENST00000598772 WASLO00401 505 aaPredicted RBP6.66□□□□□ -1.34
HERC3-213ENST00000598772 DPEP1P16444 411 aa6.66□□□□□ -1.34
HERC3-213ENST00000598772 NLRP6P59044 892 aa6.66□□□□□ -1.34
HERC3-213ENST00000598772 MAP2K1Q02750 393 aaPredicted RBP6.66□□□□□ -1.34
HERC3-213ENST00000598772 MMRN1Q13201 1228 aa6.66□□□□□ -1.34
HERC3-213ENST00000598772 DGKZQ13574 1117 aa6.66□□□□□ -1.34
HERC3-213ENST00000598772 CFAP70Q5T0N1 1121 aa6.66□□□□□ -1.34
HERC3-213ENST00000598772 SLC17A8Q8NDX2 589 aa6.66□□□□□ -1.34
HERC3-213ENST00000598772 NLRP2Q9NX02 1062 aa6.66□□□□□ -1.34
HERC3-213ENST00000598772 ACEP12821 1306 aa6.66□□□□□ -1.34
HERC3-213ENST00000598772 CRYBG1Q9Y4K1 1723 aa6.65□□□□□ -1.34
HERC3-213ENST00000598772 BTAF1O14981 1849 aa6.65□□□□□ -1.34
HERC3-213ENST00000598772 COL24A1Q17RW2 1714 aa6.64□□□□□ -1.35
HERC3-213ENST00000598772 TGFB2P61812 414 aa6.64□□□□□ -1.35
HERC3-213ENST00000598772 DEFB115Q30KQ5 88 aa6.64□□□□□ -1.35
HERC3-213ENST00000598772 HABP4Q5JVS0 413 aaKnown RBP6.64□□□□□ -1.35
HERC3-213ENST00000598772 GCC1Q96CN9 775 aa6.64□□□□□ -1.35
HERC3-213ENST00000598772 AK7Q96M32 723 aa6.64□□□□□ -1.35
HERC3-213ENST00000598772 CLEC11AQ9Y240 323 aa6.64□□□□□ -1.35
HERC3-213ENST00000598772 EIF3AQ14152 1382 aaKnown RBP6.64□□□□□ -1.35
HERC3-213ENST00000598772 TUBGCP6Q96RT7 1819 aa6.64□□□□□ -1.35
HERC3-213ENST00000598772 GLTPD2A6NH11 291 aa6.63□□□□□ -1.35
HERC3-213ENST00000598772 TMEM88BA6NKF7 163 aa6.63□□□□□ -1.35
HERC3-213ENST00000598772 MMP10P09238 476 aa6.63□□□□□ -1.35
HERC3-213ENST00000598772 CD44P16070 742 aaKnown RBP6.63□□□□□ -1.35
HERC3-213ENST00000598772 ERBB3P21860 1342 aa6.63□□□□□ -1.35
HERC3-213ENST00000598772 DALRD3Q5D0E6 543 aaKnown RBP6.63□□□□□ -1.35
HERC3-213ENST00000598772 NHSQ6T4R5 1651 aa6.63□□□□□ -1.35
HERC3-213ENST00000598772 ABT1Q9ULW3 272 aaKnown RBP6.63□□□□□ -1.35
HERC3-213ENST00000598772 LMO7Q8WWI1 1683 aa6.62□□□□□ -1.35
HERC3-213ENST00000598772 A0A0C4DFX4 3053 aa6.62□□□□□ -1.35
HERC3-213ENST00000598772 C10orf71Q711Q0 1435 aa6.62□□□□□ -1.35
HERC3-213ENST00000598772 WDR33Q9C0J8 1336 aaKnown RBP6.62□□□□□ -1.35
HERC3-213ENST00000598772 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.62□□□□□ -1.35
HERC3-213ENST00000598772 IL2RBP14784 551 aa6.62□□□□□ -1.35
HERC3-213ENST00000598772 RASSF7Q02833 373 aa6.62□□□□□ -1.35
HERC3-213ENST00000598772 PIM2Q9P1W9 311 aa6.62□□□□□ -1.35
HERC3-213ENST00000598772 QSER1Q2KHR3 1735 aa6.62□□□□□ -1.35
HERC3-213ENST00000598772 PXDNLA1KZ92 1463 aa6.61□□□□□ -1.35
HERC3-213ENST00000598772 MYCNP04198 464 aaPredicted RBP6.61□□□□□ -1.35
HERC3-213ENST00000598772 DPY19L2Q6NUT2 758 aa6.61□□□□□ -1.35
HERC3-213ENST00000598772 NBPF15Q8N660 670 aa6.61□□□□□ -1.35
HERC3-213ENST00000598772 CDK19Q9BWU1 502 aa6.61□□□□□ -1.35
HERC3-213ENST00000598772 C14orf93Q9H972 538 aaKnown RBP6.61□□□□□ -1.35
HERC3-213ENST00000598772 PPIP5K1Q6PFW1 1433 aa6.6□□□□□ -1.35
HERC3-213ENST00000598772 USP47Q96K76 1375 aa6.6□□□□□ -1.35
HERC3-213ENST00000598772 CCDC87Q9NVE4 849 aa6.6□□□□□ -1.35
HERC3-213ENST00000598772 VPS8Q8N3P4 1428 aa6.59□□□□□ -1.35
HERC3-213ENST00000598772 PPLO60437 1756 aa6.59□□□□□ -1.35
HERC3-213ENST00000598772 N4BP2Q86UW6 1770 aaPredicted RBP6.59□□□□□ -1.35
HERC3-213ENST00000598772 CCDC7Q96M83 1385 aa6.59□□□□□ -1.35
HERC3-213ENST00000598772 POTECB2RU33 542 aa6.59□□□□□ -1.35
HERC3-213ENST00000598772 EAPPQ56P03 285 aaPredicted RBP6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms