RNA–Protein interactions for RNA: ENST00000598278.5

SMIM7-216, Transcript of small integral membrane protein 7, humanhuman

TSL 3

Gene SMIM7, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM7-216ENST00000598278 BARGINQ6ZT62 677 aa15.17■□□□□ 0.02
SMIM7-216ENST00000598278 PHACTR3Q96KR7 559 aa15.17■□□□□ 0.02
SMIM7-216ENST00000598278 QTRT2Q9H974 415 aaKnown RBP15.17■□□□□ 0.02
SMIM7-216ENST00000598278 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.17■□□□□ 0.02
SMIM7-216ENST00000598278 SPG7Q9UQ90 795 aa15.17■□□□□ 0.02
SMIM7-216ENST00000598278 DLG5Q8TDM6 1919 aa15.16■□□□□ 0.02
SMIM7-216ENST00000598278 HNRNPUQ00839 825 aaKnown RBP eCLIP15.16■□□□□ 0.02
SMIM7-216ENST00000598278 NFE2L2Q16236 605 aa15.16■□□□□ 0.02
SMIM7-216ENST00000598278 NCBP3Q53F19 620 aaKnown RBP15.16■□□□□ 0.02
SMIM7-216ENST00000598278 GJD4Q96KN9 370 aaPredicted RBP15.16■□□□□ 0.02
SMIM7-216ENST00000598278 MEGF6O75095 1541 aa15.16■□□□□ 0.02
SMIM7-216ENST00000598278 OVOS2A0A0G2JMS6 1433 aa15.16■□□□□ 0.02
SMIM7-216ENST00000598278 PKD1L3Q7Z443 1732 aa15.15■□□□□ 0.02
SMIM7-216ENST00000598278 TMPOP42166 694 aaKnown RBP15.15■□□□□ 0.02
SMIM7-216ENST00000598278 LMOD3Q0VAK6 560 aa15.15■□□□□ 0.02
SMIM7-216ENST00000598278 PHF23Q9BUL5 403 aaPredicted RBP15.15■□□□□ 0.02
SMIM7-216ENST00000598278 RIPK4P57078 832 aa15.14■□□□□ 0.01
SMIM7-216ENST00000598278 MTHFSDQ2M296 383 aaKnown RBP15.14■□□□□ 0.01
SMIM7-216ENST00000598278 C1orf141Q5JVX7 400 aa15.14■□□□□ 0.01
SMIM7-216ENST00000598278 ZCRB1Q8TBF4 217 aaKnown RBP15.14■□□□□ 0.01
SMIM7-216ENST00000598278 YTHDC1Q96MU7 727 aaKnown RBP15.14■□□□□ 0.01
SMIM7-216ENST00000598278 DISP2A7MBM2 1401 aa15.14■□□□□ 0.01
SMIM7-216ENST00000598278 EXOC5O00471 708 aa15.13■□□□□ 0.01
SMIM7-216ENST00000598278 NEUROD2Q15784 382 aa15.13■□□□□ 0.01
SMIM7-216ENST00000598278 ZNF530Q6P9A1 599 aaPredicted RBP15.13■□□□□ 0.01
SMIM7-216ENST00000598278 GLI3P10071 1580 aa15.12■□□□□ 0.01
SMIM7-216ENST00000598278 FAM98CQ17RN3 349 aaKnown RBP15.12■□□□□ 0.01
SMIM7-216ENST00000598278 RRP7AQ9Y3A4 280 aaKnown RBP15.12■□□□□ 0.01
SMIM7-216ENST00000598278 PCDH11XQ9BZA7 1347 aa15.12■□□□□ 0.01
SMIM7-216ENST00000598278 PCDH11YQ9BZA8 1340 aa15.12■□□□□ 0.01
SMIM7-216ENST00000598278 GNAT3A8MTJ3 354 aa15.11■□□□□ 0.01
SMIM7-216ENST00000598278 HTATSF1O43719 755 aaKnown RBP15.11■□□□□ 0.01
SMIM7-216ENST00000598278 RBM6P78332 1123 aaKnown RBP15.11■□□□□ 0.01
SMIM7-216ENST00000598278 DDB1Q16531 1140 aa15.11■□□□□ 0.01
SMIM7-216ENST00000598278 CCDC27Q2M243 656 aa15.11■□□□□ 0.01
SMIM7-216ENST00000598278 AKAP4Q5JQC9 854 aa15.11■□□□□ 0.01
SMIM7-216ENST00000598278 IFNL2Q8IZJ0 200 aa15.11■□□□□ 0.01
SMIM7-216ENST00000598278 RTF1Q92541 710 aaKnown RBP15.11■□□□□ 0.01
SMIM7-216ENST00000598278 MAP3K5Q99683 1374 aa15.11■□□□□ 0.01
SMIM7-216ENST00000598278 A0A0G2JS52 829 aa15.1■□□□□ 0.01
SMIM7-216ENST00000598278 HSP90AB1P08238 724 aaKnown RBP15.1■□□□□ 0.01
SMIM7-216ENST00000598278 MYT1Q01538 1121 aa15.1■□□□□ 0.01
SMIM7-216ENST00000598278 SALL2Q9Y467 1007 aaPredicted RBP15.1■□□□□ 0.01
SMIM7-216ENST00000598278 VIRMAQ69YN4 1812 aaKnown RBP15.1■□□□□ 0.01
SMIM7-216ENST00000598278 TNS2Q63HR2 1409 aa15.09■□□□□ 0.01
SMIM7-216ENST00000598278 ONECUT3O60422 494 aaPredicted RBP15.09■□□□□ 0.01
SMIM7-216ENST00000598278 ZBED9Q6R2W3 1325 aa15.09■□□□□ 0.01
SMIM7-216ENST00000598278 THSD7AQ9UPZ6 1657 aa15.09■□□□□ 0.01
SMIM7-216ENST00000598278 SHANK3Q9BYB0 1731 aa15.09■□□□□ 0.01
SMIM7-216ENST00000598278 LRRC37A3O60309 1634 aa15.08■□□□□ 0
SMIM7-216ENST00000598278 SENP3-EIF4A1A0A087X0R7 540 aa15.08■□□□□ 0
SMIM7-216ENST00000598278 PHKG2P15735 406 aa15.08■□□□□ 0
SMIM7-216ENST00000598278 RXRBP28702 533 aa15.08■□□□□ 0
SMIM7-216ENST00000598278 CALD1Q05682 793 aaKnown RBP15.08■□□□□ 0
SMIM7-216ENST00000598278 KAT6BQ8WYB5 2073 aa15.08■□□□□ 0
SMIM7-216ENST00000598278 CYP27B1O15528 508 aa15.07■□□□□ 0
SMIM7-216ENST00000598278 WWC1Q8IX03 1113 aa15.07■□□□□ 0
SMIM7-216ENST00000598278 DDX54Q8TDD1 881 aaKnown RBP15.07■□□□□ 0
SMIM7-216ENST00000598278 TRIM35Q9UPQ4 493 aa15.07■□□□□ 0
SMIM7-216ENST00000598278 SCN11AQ9UI33 1791 aa15.06■□□□□ 0
SMIM7-216ENST00000598278 PDE3BQ13370 1112 aa15.06■□□□□ 0
SMIM7-216ENST00000598278 WDR63Q8IWG1 891 aa15.06■□□□□ 0
SMIM7-216ENST00000598278 DCAF5Q96JK2 942 aa15.06■□□□□ 0
SMIM7-216ENST00000598278 RGS17Q9UGC6 210 aaPredicted RBP15.06■□□□□ 0
SMIM7-216ENST00000598278 NKX1-1Q15270 411 aaPredicted RBP15.05■□□□□ -0
SMIM7-216ENST00000598278 SEPT12Q8IYM1 358 aa15.05■□□□□ -0
SMIM7-216ENST00000598278 ZNF521Q96K83 1311 aa15.04■□□□□ -0
SMIM7-216ENST00000598278 RNMTO43148 476 aaKnown RBP15.04■□□□□ -0
SMIM7-216ENST00000598278 MCM10Q7L590 875 aa15.04■□□□□ -0
SMIM7-216ENST00000598278 IL16Q14005 1332 aa15.03■□□□□ -0
SMIM7-216ENST00000598278 GOLGA2Q08379 1002 aa15.03■□□□□ -0
SMIM7-216ENST00000598278 DCTN1Q14203 1278 aa15.03■□□□□ -0
SMIM7-216ENST00000598278 MPRIPQ6WCQ1 1025 aa15.03■□□□□ -0
SMIM7-216ENST00000598278 ADAMTS7Q9UKP4 1686 aa15.03■□□□□ -0
SMIM7-216ENST00000598278 TEFQ10587 303 aa15.02■□□□□ -0
SMIM7-216ENST00000598278 POTEAQ6S8J7 498 aa15.02■□□□□ -0
SMIM7-216ENST00000598278 IL17REQ8NFR9 667 aa15.02■□□□□ -0
SMIM7-216ENST00000598278 LGR6Q9HBX8 967 aa15.02■□□□□ -0
SMIM7-216ENST00000598278 BRWD3Q6RI45 1802 aa15.01□□□□□ -0.01
SMIM7-216ENST00000598278 CEMIPQ8WUJ3 1361 aa15.01□□□□□ -0.01
SMIM7-216ENST00000598278 MARCH10Q8NA82 808 aaPredicted RBP15.01□□□□□ -0.01
SMIM7-216ENST00000598278 ERVV-2B6SEH9 535 aa15□□□□□ -0.01
SMIM7-216ENST00000598278 E9PSI1 815 aa15□□□□□ -0.01
SMIM7-216ENST00000598278 GNAI1P63096 354 aa15□□□□□ -0.01
SMIM7-216ENST00000598278 THUMPD2Q9BTF0 503 aaKnown RBP15□□□□□ -0.01
SMIM7-216ENST00000598278 KDM6AO15550 1401 aaPredicted RBP15□□□□□ -0.01
SMIM7-216ENST00000598278 CABP4P57796 275 aa14.99□□□□□ -0.01
SMIM7-216ENST00000598278 TAF7Q15545 349 aaPredicted RBP14.99□□□□□ -0.01
SMIM7-216ENST00000598278 KRT27Q7Z3Y8 459 aa14.99□□□□□ -0.01
SMIM7-216ENST00000598278 MYH16Q9H6N6 1097 aa14.99□□□□□ -0.01
SMIM7-216ENST00000598278 SLC52A2Q9HAB3 445 aa14.99□□□□□ -0.01
SMIM7-216ENST00000598278 IFT57Q9NWB7 429 aa14.99□□□□□ -0.01
SMIM7-216ENST00000598278 BABAM1Q9NWV8 329 aa14.99□□□□□ -0.01
SMIM7-216ENST00000598278 ITGB4P16144 1822 aa14.99□□□□□ -0.01
SMIM7-216ENST00000598278 SIPA1L3O60292 1781 aaPredicted RBP14.98□□□□□ -0.01
SMIM7-216ENST00000598278 CFAP44Q96MT7 982 aa14.98□□□□□ -0.01
SMIM7-216ENST00000598278 LAS1LQ9Y4W2 734 aaKnown RBP14.98□□□□□ -0.01
SMIM7-216ENST00000598278 MRC1P22897 1456 aa14.97□□□□□ -0.01
SMIM7-216ENST00000598278 SLFN5Q08AF3 891 aa14.97□□□□□ -0.01
SMIM7-216ENST00000598278 DOT1LQ8TEK3 1739 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms