RNA–Protein interactions for RNA: ENST00000597626.5

LINC00649-209, long intergenic non-protein coding RNA 649, humanhuman

TSL 5 BASIC

Gene LINC00649, Length 612 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-209ENST00000597626 POLD1P28340 1107 aa13.31□□□□□ -0.28
LINC00649-209ENST00000597626 TRIM26Q12899 539 aaPredicted RBP13.31□□□□□ -0.28
LINC00649-209ENST00000597626 RAPGEF4Q8WZA2 1011 aa13.31□□□□□ -0.28
LINC00649-209ENST00000597626 TFCP2L1Q9NZI6 479 aa13.31□□□□□ -0.28
LINC00649-209ENST00000597626 SMG6Q86US8 1419 aaKnown RBP13.3□□□□□ -0.28
LINC00649-209ENST00000597626 NBPF6Q5VWK0 638 aa13.3□□□□□ -0.28
LINC00649-209ENST00000597626 NBPF4Q96M43 638 aa13.3□□□□□ -0.28
LINC00649-209ENST00000597626 PAPPAQ13219 1627 aa13.3□□□□□ -0.28
LINC00649-209ENST00000597626 USP47Q96K76 1375 aa13.3□□□□□ -0.28
LINC00649-209ENST00000597626 TATP17735 454 aaPredicted RBP13.29□□□□□ -0.28
LINC00649-209ENST00000597626 HMGB2P26583 209 aaKnown RBP13.29□□□□□ -0.28
LINC00649-209ENST00000597626 CCNL1Q9UK58 526 aaPredicted RBP13.28□□□□□ -0.28
LINC00649-209ENST00000597626 PNPLA7Q6ZV29 1317 aa13.28□□□□□ -0.28
LINC00649-209ENST00000597626 MAP3K5Q99683 1374 aa13.28□□□□□ -0.28
LINC00649-209ENST00000597626 MEGF6O75095 1541 aa13.28□□□□□ -0.28
LINC00649-209ENST00000597626 KCNQ4P56696 695 aa13.27□□□□□ -0.29
LINC00649-209ENST00000597626 HSP90AB2PQ58FF8 381 aa13.27□□□□□ -0.29
LINC00649-209ENST00000597626 KLHL34Q8N239 644 aa13.27□□□□□ -0.29
LINC00649-209ENST00000597626 USHBP1Q8N6Y0 703 aa13.27□□□□□ -0.29
LINC00649-209ENST00000597626 INSRP06213 1382 aa13.27□□□□□ -0.29
LINC00649-209ENST00000597626 KIF24Q5T7B8 1368 aa13.27□□□□□ -0.29
LINC00649-209ENST00000597626 NSD2O96028 1365 aa13.26□□□□□ -0.29
LINC00649-209ENST00000597626 GPR162Q16538 588 aa13.26□□□□□ -0.29
LINC00649-209ENST00000597626 ZNF784Q8NCA9 323 aaPredicted RBP13.26□□□□□ -0.29
LINC00649-209ENST00000597626 FLT4P35916 1363 aa13.25□□□□□ -0.29
LINC00649-209ENST00000597626 PCDH11XQ9BZA7 1347 aa13.25□□□□□ -0.29
LINC00649-209ENST00000597626 PCDH11YQ9BZA8 1340 aa13.25□□□□□ -0.29
LINC00649-209ENST00000597626 MSH5O43196 834 aa13.25□□□□□ -0.29
LINC00649-209ENST00000597626 TIMELESSQ9UNS1 1208 aa13.25□□□□□ -0.29
LINC00649-209ENST00000597626 RGPD2P0DJD1 1756 aa13.25□□□□□ -0.29
LINC00649-209ENST00000597626 DOT1LQ8TEK3 1739 aa13.24□□□□□ -0.29
LINC00649-209ENST00000597626 QSER1Q2KHR3 1735 aa13.23□□□□□ -0.29
LINC00649-209ENST00000597626 CARD14Q9BXL6 1004 aa13.23□□□□□ -0.29
LINC00649-209ENST00000597626 LY75O60449 1722 aa13.22□□□□□ -0.29
LINC00649-209ENST00000597626 PPM1GO15355 546 aaPredicted RBP13.22□□□□□ -0.29
LINC00649-209ENST00000597626 MPRIPQ6WCQ1 1025 aa13.22□□□□□ -0.29
LINC00649-209ENST00000597626 COL23A1Q86Y22 540 aaPredicted RBP13.22□□□□□ -0.29
LINC00649-209ENST00000597626 FLAD1Q8NFF5 587 aa13.22□□□□□ -0.29
LINC00649-209ENST00000597626 SHANK3Q9BYB0 1731 aa13.22□□□□□ -0.29
LINC00649-209ENST00000597626 PELP1Q8IZL8 1130 aaKnown RBP13.21□□□□□ -0.29
LINC00649-209ENST00000597626 SMARCC1Q92922 1105 aaPredicted RBP13.21□□□□□ -0.29
LINC00649-209ENST00000597626 EMILIN1Q9Y6C2 1016 aa13.21□□□□□ -0.29
LINC00649-209ENST00000597626 NSD3Q9BZ95 1437 aa13.21□□□□□ -0.3
LINC00649-209ENST00000597626 CHD4Q14839 1912 aa13.2□□□□□ -0.3
LINC00649-209ENST00000597626 CYP27B1O15528 508 aa13.2□□□□□ -0.3
LINC00649-209ENST00000597626 SPG7Q9UQ90 795 aa13.2□□□□□ -0.3
LINC00649-209ENST00000597626 KIF20BQ96Q89 1820 aa13.2□□□□□ -0.3
LINC00649-209ENST00000597626 PALLDQ8WX93 1383 aa13.2□□□□□ -0.3
LINC00649-209ENST00000597626 WASHC2AQ641Q2 1341 aa13.18□□□□□ -0.3
LINC00649-209ENST00000597626 GRIN3BO60391 1043 aa13.18□□□□□ -0.3
LINC00649-209ENST00000597626 NLGN2Q8NFZ4 835 aa13.18□□□□□ -0.3
LINC00649-209ENST00000597626 COL24A1Q17RW2 1714 aa13.18□□□□□ -0.3
LINC00649-209ENST00000597626 CLSPNQ9HAW4 1339 aa13.17□□□□□ -0.3
LINC00649-209ENST00000597626 NKX1-1Q15270 411 aaPredicted RBP13.17□□□□□ -0.3
LINC00649-209ENST00000597626 AK7Q96M32 723 aa13.17□□□□□ -0.3
LINC00649-209ENST00000597626 POLR3GLQ9BT43 218 aa13.17□□□□□ -0.3
LINC00649-209ENST00000597626 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.17□□□□□ -0.3
LINC00649-209ENST00000597626 TUBGCP6Q96RT7 1819 aa13.16□□□□□ -0.3
LINC00649-209ENST00000597626 MSL1Q68DK7 614 aa13.16□□□□□ -0.3
LINC00649-209ENST00000597626 PIGBQ92521 554 aa13.16□□□□□ -0.3
LINC00649-209ENST00000597626 EYA1Q99502 592 aa13.16□□□□□ -0.3
LINC00649-209ENST00000597626 C1QTNF8P60827 252 aa13.15□□□□□ -0.3
LINC00649-209ENST00000597626 IFNL2Q8IZJ0 200 aa13.15□□□□□ -0.3
LINC00649-209ENST00000597626 POLKQ9UBT6 870 aa13.15□□□□□ -0.3
LINC00649-209ENST00000597626 CD2APQ9Y5K6 639 aa13.15□□□□□ -0.3
LINC00649-209ENST00000597626 NCAPD2Q15021 1401 aa13.14□□□□□ -0.31
LINC00649-209ENST00000597626 PCGF6Q9BYE7 350 aa13.14□□□□□ -0.31
LINC00649-209ENST00000597626 TMOD3Q9NYL9 352 aa13.14□□□□□ -0.31
LINC00649-209ENST00000597626 C5P01031 1676 aa13.13□□□□□ -0.31
LINC00649-209ENST00000597626 LOC102724428A0A0B4J2F2 783 aa13.13□□□□□ -0.31
LINC00649-209ENST00000597626 SIK1P57059 783 aa13.13□□□□□ -0.31
LINC00649-209ENST00000597626 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.12□□□□□ -0.31
LINC00649-209ENST00000597626 GIGYF1O75420 1035 aaPredicted RBP13.12□□□□□ -0.31
LINC00649-209ENST00000597626 PHF14O94880 888 aa13.12□□□□□ -0.31
LINC00649-209ENST00000597626 PHKG2P15735 406 aa13.12□□□□□ -0.31
LINC00649-209ENST00000597626 YBX3P16989 372 aaKnown RBP eCLIP13.12□□□□□ -0.312e-6■□□□□ 9.6
LINC00649-209ENST00000597626 SSFA2P28290 1259 aa13.12□□□□□ -0.31
LINC00649-209ENST00000597626 TNNT2P45379 298 aaPredicted RBP13.12□□□□□ -0.31
LINC00649-209ENST00000597626 EIF4G2P78344 907 aaKnown RBP eCLIP13.12□□□□□ -0.31
LINC00649-209ENST00000597626 PKD1L3Q7Z443 1732 aa13.12□□□□□ -0.31
LINC00649-209ENST00000597626 SENP3-EIF4A1A0A087X0R7 540 aa13.11□□□□□ -0.31
LINC00649-209ENST00000597626 ATP6V1AP38606 617 aa13.11□□□□□ -0.31
LINC00649-209ENST00000597626 EIF4A2Q14240 407 aaKnown RBP13.11□□□□□ -0.31
LINC00649-209ENST00000597626 MAP2P11137 1827 aaKnown RBP13.11□□□□□ -0.31
LINC00649-209ENST00000597626 ITGB4P16144 1822 aa13.11□□□□□ -0.31
LINC00649-209ENST00000597626 ASAP1Q9ULH1 1129 aa13.1□□□□□ -0.31
LINC00649-209ENST00000597626 TAF1LQ8IZX4 1826 aa13.1□□□□□ -0.31
LINC00649-209ENST00000597626 C4BP0C0L5 1744 aa13.1□□□□□ -0.31
LINC00649-209ENST00000597626 TOGARAM1Q9Y4F4 1720 aa13.1□□□□□ -0.31
LINC00649-209ENST00000597626 PLEKHG2Q9H7P9 1386 aa13.09□□□□□ -0.31
LINC00649-209ENST00000597626 HSP90AB1P08238 724 aaKnown RBP13.09□□□□□ -0.31
LINC00649-209ENST00000597626 PLEKHO1Q53GL0 409 aaPredicted RBP13.09□□□□□ -0.31
LINC00649-209ENST00000597626 LINC00116Q8NCU8 138 aa13.09□□□□□ -0.31
LINC00649-209ENST00000597626 PANK3Q9H999 370 aa13.09□□□□□ -0.31
LINC00649-209ENST00000597626 ATG3Q9NT62 314 aa13.09□□□□□ -0.31
LINC00649-209ENST00000597626 ANKRD26Q9UPS8 1709 aa13.09□□□□□ -0.31
LINC00649-209ENST00000597626 UTRNP46939 3433 aa13.09□□□□□ -0.31
LINC00649-209ENST00000597626 ERVV-2B6SEH9 535 aa13.08□□□□□ -0.32
LINC00649-209ENST00000597626 GNPATO15228 680 aa13.08□□□□□ -0.32
LINC00649-209ENST00000597626 AMIGO3Q86WK7 504 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms