RNA–Protein interactions for RNA: ENST00000596714.1

SMG9-204, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG9, Length 576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-204ENST00000596714 RGPD1P0DJD0 1748 aa23.18■■□□□ 1.3
SMG9-204ENST00000596714 SOCS7O14512 581 aa23.17■■□□□ 1.3
SMG9-204ENST00000596714 SPG7Q9UQ90 795 aa23.17■■□□□ 1.3
SMG9-204ENST00000596714 KDRP35968 1356 aa23.15■■□□□ 1.3
SMG9-204ENST00000596714 PCDH11XQ9BZA7 1347 aa23.15■■□□□ 1.3
SMG9-204ENST00000596714 PCDH11YQ9BZA8 1340 aa23.15■■□□□ 1.3
SMG9-204ENST00000596714 FAM182BQ5T319 152 aa23.15■■□□□ 1.3
SMG9-204ENST00000596714 DDX54Q8TDD1 881 aaKnown RBP23.15■■□□□ 1.3
SMG9-204ENST00000596714 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.15■■□□□ 1.3
SMG9-204ENST00000596714 AEBP1Q8IUX7 1158 aa23.14■■□□□ 1.29
SMG9-204ENST00000596714 MARCH10Q8NA82 808 aaPredicted RBP23.14■■□□□ 1.29
SMG9-204ENST00000596714 HMOX1P09601 288 aa23.13■■□□□ 1.29
SMG9-204ENST00000596714 U2AF1L5P0DN76 240 aaPredicted RBP23.13■■□□□ 1.29
SMG9-204ENST00000596714 U2AF1Q01081 240 aaKnown RBP eCLIP23.13■■□□□ 1.29
SMG9-204ENST00000596714 CCDC125Q86Z20 511 aa23.13■■□□□ 1.29
SMG9-204ENST00000596714 EP400Q96L91 3159 aa23.13■■□□□ 1.29
SMG9-204ENST00000596714 SF3B2Q13435 895 aaKnown RBP23.12■■□□□ 1.29
SMG9-204ENST00000596714 AMOTQ4VCS5 1084 aa23.12■■□□□ 1.29
SMG9-204ENST00000596714 PLEKHO1Q53GL0 409 aaPredicted RBP23.12■■□□□ 1.29
SMG9-204ENST00000596714 BCL9O00512 1426 aa23.1■■□□□ 1.29
SMG9-204ENST00000596714 PKD1L3Q7Z443 1732 aa23.1■■□□□ 1.29
SMG9-204ENST00000596714 UPF1Q92900 1129 aaKnown RBP eCLIP23.09■■□□□ 1.29
SMG9-204ENST00000596714 NEFMP07197 916 aa23.07■■□□□ 1.28
SMG9-204ENST00000596714 IFNL2Q8IZJ0 200 aa23.07■■□□□ 1.28
SMG9-204ENST00000596714 PNNQ9H307 717 aaKnown RBP23.07■■□□□ 1.28
SMG9-204ENST00000596714 SHANK3Q9BYB0 1731 aa23.07■■□□□ 1.28
SMG9-204ENST00000596714 FCHSD2O94868 740 aa23.06■■□□□ 1.28
SMG9-204ENST00000596714 C1orf141Q5JVX7 400 aa23.06■■□□□ 1.28
SMG9-204ENST00000596714 TRIM37O94972 964 aa23.05■■□□□ 1.28
SMG9-204ENST00000596714 WDR43Q15061 677 aaKnown RBP eCLIP23.05■■□□□ 1.28
SMG9-204ENST00000596714 ZNF530Q6P9A1 599 aaPredicted RBP23.05■■□□□ 1.28
SMG9-204ENST00000596714 CYP27B1O15528 508 aa23.04■■□□□ 1.28
SMG9-204ENST00000596714 HSP90AB1P08238 724 aaKnown RBP23.04■■□□□ 1.28
SMG9-204ENST00000596714 PRKAR2BP31323 418 aa23.03■■□□□ 1.28
SMG9-204ENST00000596714 RSPH6AQ9H0K4 717 aa23.03■■□□□ 1.28
SMG9-204ENST00000596714 PHKG2P15735 406 aa23.02■■□□□ 1.28
SMG9-204ENST00000596714 BCL11BQ9C0K0 894 aaPredicted RBP23.02■■□□□ 1.28
SMG9-204ENST00000596714 GAS2L2Q8NHY3 880 aa23.01■■□□□ 1.27
SMG9-204ENST00000596714 SBF2Q86WG5 1849 aa23.01■■□□□ 1.27
SMG9-204ENST00000596714 BAG6P46379 1132 aa23■■□□□ 1.27
SMG9-204ENST00000596714 NKX1-1Q15270 411 aaPredicted RBP23■■□□□ 1.27
SMG9-204ENST00000596714 ACSBG1Q96GR2 724 aa23■■□□□ 1.27
SMG9-204ENST00000596714 SYTL4Q96C24 671 aaPredicted RBP22.99■■□□□ 1.27
SMG9-204ENST00000596714 KAT6BQ8WYB5 2073 aa22.99■■□□□ 1.27
SMG9-204ENST00000596714 NHSQ6T4R5 1651 aa22.98■■□□□ 1.27
SMG9-204ENST00000596714 APBA3O96018 575 aa22.98■■□□□ 1.27
SMG9-204ENST00000596714 AKAP4Q5JQC9 854 aa22.98■■□□□ 1.27
SMG9-204ENST00000596714 DIEXFQ68CQ4 756 aaKnown RBP22.98■■□□□ 1.27
SMG9-204ENST00000596714 DCAF5Q96JK2 942 aa22.98■■□□□ 1.27
SMG9-204ENST00000596714 MRS2Q9HD23 443 aa22.98■■□□□ 1.27
SMG9-204ENST00000596714 MAPK8IP3Q9UPT6 1336 aa22.98■■□□□ 1.27
SMG9-204ENST00000596714 MTHFSDQ2M296 383 aaKnown RBP22.97■■□□□ 1.27
SMG9-204ENST00000596714 DOT1LQ8TEK3 1739 aa22.96■■□□□ 1.27
SMG9-204ENST00000596714 TNS1Q9HBL0 1735 aaKnown RBP22.96■■□□□ 1.27
SMG9-204ENST00000596714 PRIM1P49642 420 aaKnown RBP22.95■■□□□ 1.26
SMG9-204ENST00000596714 KCNQ2O43526 872 aa22.94■■□□□ 1.26
SMG9-204ENST00000596714 PHACTR3Q96KR7 559 aa22.93■■□□□ 1.26
SMG9-204ENST00000596714 ERVV-2B6SEH9 535 aa22.92■■□□□ 1.26
SMG9-204ENST00000596714 TMOD3Q9NYL9 352 aa22.92■■□□□ 1.26
SMG9-204ENST00000596714 MAP3K5Q99683 1374 aa22.91■■□□□ 1.26
SMG9-204ENST00000596714 GNAT3A8MTJ3 354 aa22.91■■□□□ 1.26
SMG9-204ENST00000596714 MPRIPQ6WCQ1 1025 aa22.91■■□□□ 1.26
SMG9-204ENST00000596714 ADAMTS8Q9UP79 889 aa22.91■■□□□ 1.26
SMG9-204ENST00000596714 PLSCR1O15162 318 aa22.9■■□□□ 1.26
SMG9-204ENST00000596714 DEFB132Q7Z7B7 95 aa22.9■■□□□ 1.26
SMG9-204ENST00000596714 PLEKHF1Q96S99 279 aa22.9■■□□□ 1.26
SMG9-204ENST00000596714 CABP4P57796 275 aa22.89■■□□□ 1.25
SMG9-204ENST00000596714 EN1Q05925 392 aaPredicted RBP22.89■■□□□ 1.25
SMG9-204ENST00000596714 CCDC184Q52MB2 194 aa22.89■■□□□ 1.25
SMG9-204ENST00000596714 PTF1AQ7RTS3 328 aa22.89■■□□□ 1.25
SMG9-204ENST00000596714 RTF1Q92541 710 aaKnown RBP22.89■■□□□ 1.25
SMG9-204ENST00000596714 BTAF1O14981 1849 aa22.89■■□□□ 1.25
SMG9-204ENST00000596714 TOGARAM1Q9Y4F4 1720 aa22.88■■□□□ 1.25
SMG9-204ENST00000596714 RUNDC1Q96C34 613 aa22.88■■□□□ 1.25
SMG9-204ENST00000596714 KDM6AO15550 1401 aaPredicted RBP22.88■■□□□ 1.25
SMG9-204ENST00000596714 ITGB4P16144 1822 aa22.87■■□□□ 1.25
SMG9-204ENST00000596714 NFE2L2Q16236 605 aa22.86■■□□□ 1.25
SMG9-204ENST00000596714 CCDC146Q8IYE0 955 aa22.86■■□□□ 1.25
SMG9-204ENST00000596714 RGPD3A6NKT7 1758 aaPredicted RBP22.86■■□□□ 1.25
SMG9-204ENST00000596714 RGPD4Q7Z3J3 1758 aa22.86■■□□□ 1.25
SMG9-204ENST00000596714 RNMTO43148 476 aaKnown RBP22.85■■□□□ 1.25
SMG9-204ENST00000596714 HTATSF1O43719 755 aaKnown RBP22.85■■□□□ 1.25
SMG9-204ENST00000596714 PNISRQ8TF01 805 aaKnown RBP22.85■■□□□ 1.25
SMG9-204ENST00000596714 PIGBQ92521 554 aa22.85■■□□□ 1.25
SMG9-204ENST00000596714 SMARCC1Q92922 1105 aaPredicted RBP22.85■■□□□ 1.25
SMG9-204ENST00000596714 SCN11AQ9UI33 1791 aa22.85■■□□□ 1.25
SMG9-204ENST00000596714 EZH2Q15910 746 aaKnown RBP22.84■■□□□ 1.25
SMG9-204ENST00000596714 CAMKK2Q96RR4 588 aa22.84■■□□□ 1.25
SMG9-204ENST00000596714 CCER2I3L3R5 266 aa22.83■■□□□ 1.25
SMG9-204ENST00000596714 TEFQ10587 303 aa22.83■■□□□ 1.25
SMG9-204ENST00000596714 LGR6Q9HBX8 967 aa22.83■■□□□ 1.25
SMG9-204ENST00000596714 LMOD3Q0VAK6 560 aa22.82■■□□□ 1.24
SMG9-204ENST00000596714 NFATC2IPQ8NCF5 419 aa22.82■■□□□ 1.24
SMG9-204ENST00000596714 SLC52A2Q9HAB3 445 aa22.82■■□□□ 1.24
SMG9-204ENST00000596714 HMGB2P26583 209 aaKnown RBP22.81■■□□□ 1.24
SMG9-204ENST00000596714 ADAMTS7Q9UKP4 1686 aa22.81■■□□□ 1.24
SMG9-204ENST00000596714 VIRMAQ69YN4 1812 aaKnown RBP22.8■■□□□ 1.24
SMG9-204ENST00000596714 RIPK4P57078 832 aa22.8■■□□□ 1.24
SMG9-204ENST00000596714 MRC1P22897 1456 aa22.79■■□□□ 1.24
SMG9-204ENST00000596714 PALLDQ8WX93 1383 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms