RNA–Protein interactions for RNA: ENST00000596496.1

CCDC94-202, Transcript of Coiled-coil domain-containing protein 94, humanhuman

TSL 3

Gene CCDC94, Length 800 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC94-202ENST00000596496 TCP11L2Q8N4U5 519 aa13.78□□□□□ -0.2
CCDC94-202ENST00000596496 ZNF521Q96K83 1311 aa13.78□□□□□ -0.2
CCDC94-202ENST00000596496 PRKAR2BP31323 418 aa13.77□□□□□ -0.21
CCDC94-202ENST00000596496 ZBED9Q6R2W3 1325 aa13.77□□□□□ -0.21
CCDC94-202ENST00000596496 BARGINQ6ZT62 677 aa13.77□□□□□ -0.21
CCDC94-202ENST00000596496 LRRC37A3O60309 1634 aa13.76□□□□□ -0.21
CCDC94-202ENST00000596496 CRB1P82279 1406 aa13.76□□□□□ -0.21
CCDC94-202ENST00000596496 WDR17Q8IZU2 1322 aa13.76□□□□□ -0.21
CCDC94-202ENST00000596496 KRT27Q7Z3Y8 459 aa13.76□□□□□ -0.21
CCDC94-202ENST00000596496 PNNQ9H307 717 aaKnown RBP13.76□□□□□ -0.21
CCDC94-202ENST00000596496 STRN4Q9NRL3 753 aa13.76□□□□□ -0.21
CCDC94-202ENST00000596496 SBF2Q86WG5 1849 aa13.76□□□□□ -0.21
CCDC94-202ENST00000596496 PKD1L3Q7Z443 1732 aa13.76□□□□□ -0.21
CCDC94-202ENST00000596496 SHANK3Q9BYB0 1731 aa13.76□□□□□ -0.21
CCDC94-202ENST00000596496 SENP3-EIF4A1A0A087X0R7 540 aa13.75□□□□□ -0.21
CCDC94-202ENST00000596496 TMPOP42166 694 aaKnown RBP13.75□□□□□ -0.21
CCDC94-202ENST00000596496 CCDC125Q86Z20 511 aa13.75□□□□□ -0.21
CCDC94-202ENST00000596496 USHBP1Q8N6Y0 703 aa13.75□□□□□ -0.21
CCDC94-202ENST00000596496 CCDC27Q2M243 656 aa13.74□□□□□ -0.21
CCDC94-202ENST00000596496 NGEFQ8N5V2 710 aa13.74□□□□□ -0.21
CCDC94-202ENST00000596496 TRIM35Q9UPQ4 493 aa13.74□□□□□ -0.21
CCDC94-202ENST00000596496 NEFMP07197 916 aa13.73□□□□□ -0.21
CCDC94-202ENST00000596496 EVA1CP58658 441 aa13.73□□□□□ -0.21
CCDC94-202ENST00000596496 THRAP3Q9Y2W1 955 aaKnown RBP13.73□□□□□ -0.21
CCDC94-202ENST00000596496 DISP2A7MBM2 1401 aa13.73□□□□□ -0.21
CCDC94-202ENST00000596496 ADAMTS7Q9UKP4 1686 aa13.72□□□□□ -0.21
CCDC94-202ENST00000596496 NFE2L2Q16236 605 aa13.72□□□□□ -0.21
CCDC94-202ENST00000596496 CARD10Q9BWT7 1032 aa13.72□□□□□ -0.21
CCDC94-202ENST00000596496 PLEKHG2Q9H7P9 1386 aa13.71□□□□□ -0.21
CCDC94-202ENST00000596496 MTHFSDQ2M296 383 aaKnown RBP13.71□□□□□ -0.21
CCDC94-202ENST00000596496 WWC1Q8IX03 1113 aa13.71□□□□□ -0.21
CCDC94-202ENST00000596496 RRP7AQ9Y3A4 280 aaKnown RBP13.71□□□□□ -0.21
CCDC94-202ENST00000596496 SCN11AQ9UI33 1791 aa13.71□□□□□ -0.22
CCDC94-202ENST00000596496 MEGF6O75095 1541 aa13.7□□□□□ -0.22
CCDC94-202ENST00000596496 TRMT2AQ8IZ69 625 aaKnown RBP13.7□□□□□ -0.22
CCDC94-202ENST00000596496 NLRP2Q9NX02 1062 aa13.7□□□□□ -0.22
CCDC94-202ENST00000596496 USP35Q9P2H5 1018 aa13.7□□□□□ -0.22
CCDC94-202ENST00000596496 SALL2Q9Y467 1007 aaPredicted RBP13.7□□□□□ -0.22
CCDC94-202ENST00000596496 RIPK4P57078 832 aa13.69□□□□□ -0.22
CCDC94-202ENST00000596496 FAM182BQ5T319 152 aa13.69□□□□□ -0.22
CCDC94-202ENST00000596496 SIPA1L3O60292 1781 aaPredicted RBP13.68□□□□□ -0.22
CCDC94-202ENST00000596496 MAPK8IP3Q9UPT6 1336 aa13.68□□□□□ -0.22
CCDC94-202ENST00000596496 A0A0G2JS52 829 aa13.68□□□□□ -0.22
CCDC94-202ENST00000596496 CSB-PGBD3P0DP91 1061 aa13.68□□□□□ -0.22
CCDC94-202ENST00000596496 MYT1Q01538 1121 aa13.68□□□□□ -0.22
CCDC94-202ENST00000596496 SPINK5Q9NQ38 1064 aaPredicted RBP13.68□□□□□ -0.22
CCDC94-202ENST00000596496 RREB1Q92766 1687 aa13.68□□□□□ -0.22
CCDC94-202ENST00000596496 OVOS2A0A0G2JMS6 1433 aa13.67□□□□□ -0.22
CCDC94-202ENST00000596496 PDE3BQ13370 1112 aa13.67□□□□□ -0.22
CCDC94-202ENST00000596496 NEUROD2Q15784 382 aa13.67□□□□□ -0.22
CCDC94-202ENST00000596496 TOM1L2Q6ZVM7 507 aa13.67□□□□□ -0.22
CCDC94-202ENST00000596496 DEFB132Q7Z7B7 95 aa13.67□□□□□ -0.22
CCDC94-202ENST00000596496 WDR63Q8IWG1 891 aa13.67□□□□□ -0.22
CCDC94-202ENST00000596496 CDCA7LQ96GN5 454 aa13.67□□□□□ -0.22
CCDC94-202ENST00000596496 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.67□□□□□ -0.22
CCDC94-202ENST00000596496 RGPD3A6NKT7 1758 aaPredicted RBP13.66□□□□□ -0.22
CCDC94-202ENST00000596496 RGPD4Q7Z3J3 1758 aa13.66□□□□□ -0.22
CCDC94-202ENST00000596496 SLFN5Q08AF3 891 aa13.66□□□□□ -0.22
CCDC94-202ENST00000596496 HTATSF1O43719 755 aaKnown RBP13.65□□□□□ -0.22
CCDC94-202ENST00000596496 AMOTQ4VCS5 1084 aa13.65□□□□□ -0.22
CCDC94-202ENST00000596496 GAS2L2Q8NHY3 880 aa13.65□□□□□ -0.22
CCDC94-202ENST00000596496 BCL9O00512 1426 aa13.64□□□□□ -0.23
CCDC94-202ENST00000596496 CENPBP07199 599 aaPredicted RBP13.64□□□□□ -0.23
CCDC94-202ENST00000596496 ZNF853P0CG23 659 aa13.64□□□□□ -0.23
CCDC94-202ENST00000596496 PLEKHO1Q53GL0 409 aaPredicted RBP13.64□□□□□ -0.23
CCDC94-202ENST00000596496 FAM196AQ6ZSG2 479 aa13.64□□□□□ -0.23
CCDC94-202ENST00000596496 IL17REQ8NFR9 667 aa13.64□□□□□ -0.23
CCDC94-202ENST00000596496 NUP188Q5SRE5 1749 aa13.64□□□□□ -0.23
CCDC94-202ENST00000596496 IL2RBP14784 551 aa13.63□□□□□ -0.23
CCDC94-202ENST00000596496 TATP17735 454 aaPredicted RBP13.63□□□□□ -0.23
CCDC94-202ENST00000596496 GOLGA2Q08379 1002 aa13.63□□□□□ -0.23
CCDC94-202ENST00000596496 DUSP27Q5VZP5 1158 aa13.63□□□□□ -0.23
CCDC94-202ENST00000596496 RAPGEF4Q8WZA2 1011 aa13.63□□□□□ -0.23
CCDC94-202ENST00000596496 TNS2Q63HR2 1409 aa13.63□□□□□ -0.23
CCDC94-202ENST00000596496 IL16Q14005 1332 aa13.63□□□□□ -0.23
CCDC94-202ENST00000596496 ITGB4P16144 1822 aa13.62□□□□□ -0.23
CCDC94-202ENST00000596496 CEMIPQ8WUJ3 1361 aa13.62□□□□□ -0.23
CCDC94-202ENST00000596496 MAP3K5Q99683 1374 aa13.62□□□□□ -0.23
CCDC94-202ENST00000596496 CYP27B1O15528 508 aa13.62□□□□□ -0.23
CCDC94-202ENST00000596496 DCTN1Q14203 1278 aa13.62□□□□□ -0.23
CCDC94-202ENST00000596496 AKAP4Q5JQC9 854 aa13.62□□□□□ -0.23
CCDC94-202ENST00000596496 THUMPD2Q9BTF0 503 aaKnown RBP13.62□□□□□ -0.23
CCDC94-202ENST00000596496 KDM3BQ7LBC6 1761 aa13.61□□□□□ -0.23
CCDC94-202ENST00000596496 GNAT3A8MTJ3 354 aa13.61□□□□□ -0.23
CCDC94-202ENST00000596496 MARCH10Q8NA82 808 aaPredicted RBP13.61□□□□□ -0.23
CCDC94-202ENST00000596496 CDCA7Q9BWT1 371 aaPredicted RBP13.61□□□□□ -0.23
CCDC94-202ENST00000596496 LGR6Q9HBX8 967 aa13.61□□□□□ -0.23
CCDC94-202ENST00000596496 TOGARAM1Q9Y4F4 1720 aa13.61□□□□□ -0.23
CCDC94-202ENST00000596496 NHSQ6T4R5 1651 aa13.6□□□□□ -0.23
CCDC94-202ENST00000596496 TRIM37O94972 964 aa13.6□□□□□ -0.23
CCDC94-202ENST00000596496 PHKG2P15735 406 aa13.6□□□□□ -0.23
CCDC94-202ENST00000596496 LMOD3Q0VAK6 560 aa13.6□□□□□ -0.23
CCDC94-202ENST00000596496 SF3B2Q13435 895 aaKnown RBP13.6□□□□□ -0.23
CCDC94-202ENST00000596496 NKX1-1Q15270 411 aaPredicted RBP13.6□□□□□ -0.23
CCDC94-202ENST00000596496 DDB1Q16531 1140 aa13.6□□□□□ -0.23
CCDC94-202ENST00000596496 ZNF530Q6P9A1 599 aaPredicted RBP13.6□□□□□ -0.23
CCDC94-202ENST00000596496 MCM10Q7L590 875 aa13.6□□□□□ -0.23
CCDC94-202ENST00000596496 ZCRB1Q8TBF4 217 aaKnown RBP13.6□□□□□ -0.23
CCDC94-202ENST00000596496 SPG7Q9UQ90 795 aa13.6□□□□□ -0.23
CCDC94-202ENST00000596496 KDM6AO15550 1401 aaPredicted RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms