RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 MEGF6O75095 1541 aa14.97□□□□□ -0.01
LIG1-211ENST00000596457 EN1Q05925 392 aaPredicted RBP14.97□□□□□ -0.01
LIG1-211ENST00000596457 TNS2Q63HR2 1409 aa14.97□□□□□ -0.01
LIG1-211ENST00000596457 OVOS2A0A0G2JMS6 1433 aa14.96□□□□□ -0.01
LIG1-211ENST00000596457 ZCRB1Q8TBF4 217 aaKnown RBP14.96□□□□□ -0.01
LIG1-211ENST00000596457 ACSBG1Q96GR2 724 aa14.96□□□□□ -0.01
LIG1-211ENST00000596457 SBF2Q86WG5 1849 aa14.96□□□□□ -0.01
LIG1-211ENST00000596457 APBA3O96018 575 aa14.95□□□□□ -0.02
LIG1-211ENST00000596457 PPP2R1AP30153 589 aa14.95□□□□□ -0.02
LIG1-211ENST00000596457 KAT6BQ8WYB5 2073 aa14.95□□□□□ -0.02
LIG1-211ENST00000596457 DIAPH1O60610 1272 aaKnown RBP14.94□□□□□ -0.02
LIG1-211ENST00000596457 IL13P35225 146 aa14.94□□□□□ -0.02
LIG1-211ENST00000596457 CAMKK2Q96RR4 588 aa14.94□□□□□ -0.02
LIG1-211ENST00000596457 BCL9O00512 1426 aa14.93□□□□□ -0.02
LIG1-211ENST00000596457 SHANK3Q9BYB0 1731 aa14.93□□□□□ -0.02
LIG1-211ENST00000596457 CFAP53Q96M91 514 aa14.93□□□□□ -0.02
LIG1-211ENST00000596457 U2SURPO15042 1029 aaKnown RBP14.92□□□□□ -0.02
LIG1-211ENST00000596457 R3HDM1Q15032 1099 aaKnown RBP14.92□□□□□ -0.02
LIG1-211ENST00000596457 EZH2Q15910 746 aaKnown RBP14.92□□□□□ -0.02
LIG1-211ENST00000596457 SULT6B1Q6IMI4 303 aa14.92□□□□□ -0.02
LIG1-211ENST00000596457 AEBP1Q8IUX7 1158 aa14.92□□□□□ -0.02
LIG1-211ENST00000596457 IGSF1Q8N6C5 1336 aa14.92□□□□□ -0.02
LIG1-211ENST00000596457 HMOX1P09601 288 aa14.91□□□□□ -0.02
LIG1-211ENST00000596457 PTF1AQ7RTS3 328 aa14.91□□□□□ -0.02
LIG1-211ENST00000596457 SPG7Q9UQ90 795 aa14.91□□□□□ -0.02
LIG1-211ENST00000596457 PLSCR1O15162 318 aa14.9□□□□□ -0.02
LIG1-211ENST00000596457 KCNQ2O43526 872 aa14.9□□□□□ -0.02
LIG1-211ENST00000596457 NBPF14Q5TI25 921 aa14.9□□□□□ -0.02
LIG1-211ENST00000596457 SYTL4Q96C24 671 aaPredicted RBP14.9□□□□□ -0.02
LIG1-211ENST00000596457 BCL11BQ9C0K0 894 aaPredicted RBP14.9□□□□□ -0.02
LIG1-211ENST00000596457 DCAF8L1A6NGE4 600 aa14.89□□□□□ -0.03
LIG1-211ENST00000596457 NCAPD2Q15021 1401 aa14.89□□□□□ -0.03
LIG1-211ENST00000596457 PCDH11XQ9BZA7 1347 aa14.89□□□□□ -0.03
LIG1-211ENST00000596457 PCDH11YQ9BZA8 1340 aa14.89□□□□□ -0.03
LIG1-211ENST00000596457 PKD1L3Q7Z443 1732 aa14.89□□□□□ -0.03
LIG1-211ENST00000596457 RALBP1Q15311 655 aa14.88□□□□□ -0.03
LIG1-211ENST00000596457 PLEKHO1Q53GL0 409 aaPredicted RBP14.88□□□□□ -0.03
LIG1-211ENST00000596457 ZNF784Q8NCA9 323 aaPredicted RBP14.88□□□□□ -0.03
LIG1-211ENST00000596457 DOT1LQ8TEK3 1739 aa14.88□□□□□ -0.03
LIG1-211ENST00000596457 RGPD3A6NKT7 1758 aaPredicted RBP14.88□□□□□ -0.03
LIG1-211ENST00000596457 RGPD4Q7Z3J3 1758 aa14.88□□□□□ -0.03
LIG1-211ENST00000596457 RREB1Q92766 1687 aa14.87□□□□□ -0.03
LIG1-211ENST00000596457 CYP27B1O15528 508 aa14.87□□□□□ -0.03
LIG1-211ENST00000596457 C1QTNF8P60827 252 aa14.87□□□□□ -0.03
LIG1-211ENST00000596457 COL3A1P02461 1466 aaPredicted RBP14.87□□□□□ -0.03
LIG1-211ENST00000596457 NHSQ6T4R5 1651 aa14.87□□□□□ -0.03
LIG1-211ENST00000596457 PRIM1P49642 420 aaKnown RBP14.86□□□□□ -0.03
LIG1-211ENST00000596457 NUDCQ9Y266 331 aa14.86□□□□□ -0.03
LIG1-211ENST00000596457 ZNF530Q6P9A1 599 aaPredicted RBP14.85□□□□□ -0.03
LIG1-211ENST00000596457 IFNL2Q8IZJ0 200 aa14.85□□□□□ -0.03
LIG1-211ENST00000596457 BTAF1O14981 1849 aa14.85□□□□□ -0.03
LIG1-211ENST00000596457 U2AF1L5P0DN76 240 aaPredicted RBP14.84□□□□□ -0.03
LIG1-211ENST00000596457 U2AF1Q01081 240 aaKnown RBP eCLIP14.84□□□□□ -0.03
LIG1-211ENST00000596457 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.84□□□□□ -0.03
LIG1-211ENST00000596457 CEP350Q5VT06 3117 aa14.83□□□□□ -0.03
LIG1-211ENST00000596457 PHKG2P15735 406 aa14.83□□□□□ -0.04
LIG1-211ENST00000596457 AMOTQ4VCS5 1084 aa14.83□□□□□ -0.04
LIG1-211ENST00000596457 C1orf141Q5JVX7 400 aa14.83□□□□□ -0.04
LIG1-211ENST00000596457 MYBBP1AQ9BQG0 1328 aaKnown RBP14.83□□□□□ -0.04
LIG1-211ENST00000596457 NUP188Q5SRE5 1749 aa14.83□□□□□ -0.04
LIG1-211ENST00000596457 ITGB4P16144 1822 aa14.82□□□□□ -0.04
LIG1-211ENST00000596457 MPRIPQ6WCQ1 1025 aa14.82□□□□□ -0.04
LIG1-211ENST00000596457 KDRP35968 1356 aa14.82□□□□□ -0.04
LIG1-211ENST00000596457 TOGARAM1Q9Y4F4 1720 aa14.81□□□□□ -0.04
LIG1-211ENST00000596457 PRKRIP1Q9H875 184 aaPredicted RBP14.81□□□□□ -0.04
LIG1-211ENST00000596457 PRKAR2BP31323 418 aa14.79□□□□□ -0.04
LIG1-211ENST00000596457 NKX1-1Q15270 411 aaPredicted RBP14.79□□□□□ -0.04
LIG1-211ENST00000596457 MTHFSDQ2M296 383 aaKnown RBP14.79□□□□□ -0.04
LIG1-211ENST00000596457 VIRMAQ69YN4 1812 aaKnown RBP14.79□□□□□ -0.04
LIG1-211ENST00000596457 HSP90AB1P08238 724 aaKnown RBP14.78□□□□□ -0.04
LIG1-211ENST00000596457 TXNRD1Q16881 649 aa14.78□□□□□ -0.04
LIG1-211ENST00000596457 PPP1R1BQ9UD71 204 aaPredicted RBP14.78□□□□□ -0.04
LIG1-211ENST00000596457 ANP32CO43423 234 aa14.77□□□□□ -0.05
LIG1-211ENST00000596457 DCAF5Q96JK2 942 aa14.77□□□□□ -0.05
LIG1-211ENST00000596457 RSPH6AQ9H0K4 717 aa14.77□□□□□ -0.05
LIG1-211ENST00000596457 TMOD3Q9NYL9 352 aa14.77□□□□□ -0.05
LIG1-211ENST00000596457 NEFMP07197 916 aa14.76□□□□□ -0.05
LIG1-211ENST00000596457 KCNQ4P56696 695 aa14.76□□□□□ -0.05
LIG1-211ENST00000596457 CABP4P57796 275 aa14.76□□□□□ -0.05
LIG1-211ENST00000596457 AKAP4Q5JQC9 854 aa14.76□□□□□ -0.05
LIG1-211ENST00000596457 PROM2Q8N271 834 aa14.76□□□□□ -0.05
LIG1-211ENST00000596457 PIGBQ92521 554 aa14.76□□□□□ -0.05
LIG1-211ENST00000596457 PHACTR3Q96KR7 559 aa14.76□□□□□ -0.05
LIG1-211ENST00000596457 PLEKHG2Q9H7P9 1386 aa14.75□□□□□ -0.05
LIG1-211ENST00000596457 FCHSD2O94868 740 aa14.75□□□□□ -0.05
LIG1-211ENST00000596457 LGR6Q9HBX8 967 aa14.75□□□□□ -0.05
LIG1-211ENST00000596457 SCN11AQ9UI33 1791 aa14.75□□□□□ -0.05
LIG1-211ENST00000596457 HMGB2P26583 209 aaKnown RBP14.74□□□□□ -0.05
LIG1-211ENST00000596457 GAS2L2Q8NHY3 880 aa14.74□□□□□ -0.05
LIG1-211ENST00000596457 SPON1Q9HCB6 807 aa14.74□□□□□ -0.05
LIG1-211ENST00000596457 STK32BQ9NY57 414 aa14.74□□□□□ -0.05
LIG1-211ENST00000596457 KDM6AO15550 1401 aaPredicted RBP14.74□□□□□ -0.05
LIG1-211ENST00000596457 ERVV-2B6SEH9 535 aa14.73□□□□□ -0.05
LIG1-211ENST00000596457 RNMTO43148 476 aaKnown RBP14.73□□□□□ -0.05
LIG1-211ENST00000596457 WDR43Q15061 677 aaKnown RBP eCLIP14.73□□□□□ -0.05
LIG1-211ENST00000596457 LY75O60449 1722 aa14.72□□□□□ -0.05
LIG1-211ENST00000596457 NFATC2IPQ8NCF5 419 aa14.72□□□□□ -0.05
LIG1-211ENST00000596457 SMARCC1Q92922 1105 aaPredicted RBP14.72□□□□□ -0.05
LIG1-211ENST00000596457 CCNL1Q9UK58 526 aaPredicted RBP14.72□□□□□ -0.05
LIG1-211ENST00000596457 ASAP1Q9ULH1 1129 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms