RNA–Protein interactions for RNA: ENST00000595034.5

IRF3-209, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-209ENST00000595034 SLC27A3Q5K4L6 730 aa25.49■■□□□ 1.67
IRF3-209ENST00000595034 MYOM1P52179 1685 aa25.48■■□□□ 1.67
IRF3-209ENST00000595034 PPM1GO15355 546 aaPredicted RBP25.48■■□□□ 1.67
IRF3-209ENST00000595034 USHBP1Q8N6Y0 703 aa25.47■■□□□ 1.67
IRF3-209ENST00000595034 MEGF6O75095 1541 aa25.47■■□□□ 1.67
IRF3-209ENST00000595034 ZBTB7AO95365 584 aa25.46■■□□□ 1.67
IRF3-209ENST00000595034 HMGB2P26583 209 aaKnown RBP25.46■■□□□ 1.67
IRF3-209ENST00000595034 PRIM1P49642 420 aaKnown RBP25.46■■□□□ 1.67
IRF3-209ENST00000595034 PCDH11XQ9BZA7 1347 aa25.45■■□□□ 1.66
IRF3-209ENST00000595034 PCDH11YQ9BZA8 1340 aa25.45■■□□□ 1.66
IRF3-209ENST00000595034 BTAF1O14981 1849 aa25.45■■□□□ 1.66
IRF3-209ENST00000595034 MTFR1LQ9H019 292 aa25.44■■□□□ 1.66
IRF3-209ENST00000595034 EMILIN1Q9Y6C2 1016 aa25.44■■□□□ 1.66
IRF3-209ENST00000595034 HSPA5P11021 654 aaKnown RBP25.43■■□□□ 1.66
IRF3-209ENST00000595034 CASZ1Q86V15 1759 aa25.43■■□□□ 1.66
IRF3-209ENST00000595034 ATF5Q9Y2D1 282 aaPredicted RBP25.41■■□□□ 1.66
IRF3-209ENST00000595034 PDGFDQ9GZP0 370 aaPredicted RBP25.4■■□□□ 1.66
IRF3-209ENST00000595034 RGPD2P0DJD1 1756 aa25.4■■□□□ 1.66
IRF3-209ENST00000595034 WASHC2AQ641Q2 1341 aa25.39■■□□□ 1.66
IRF3-209ENST00000595034 KAT6BQ8WYB5 2073 aa25.38■■□□□ 1.65
IRF3-209ENST00000595034 DOT1LQ8TEK3 1739 aa25.37■■□□□ 1.65
IRF3-209ENST00000595034 LRRC4BQ9NT99 713 aa25.37■■□□□ 1.65
IRF3-209ENST00000595034 SPG7Q9UQ90 795 aa25.37■■□□□ 1.65
IRF3-209ENST00000595034 TFCP2L1Q9NZI6 479 aa25.36■■□□□ 1.65
IRF3-209ENST00000595034 CCNL1Q9UK58 526 aaPredicted RBP25.36■■□□□ 1.65
IRF3-209ENST00000595034 PAPPAQ13219 1627 aa25.36■■□□□ 1.65
IRF3-209ENST00000595034 PTGER2P43116 358 aa25.35■■□□□ 1.65
IRF3-209ENST00000595034 ZNF827Q17R98 1081 aa25.35■■□□□ 1.65
IRF3-209ENST00000595034 SLC16A10Q8TF71 515 aa25.35■■□□□ 1.65
IRF3-209ENST00000595034 NSD2O96028 1365 aa25.34■■□□□ 1.65
IRF3-209ENST00000595034 TNNT2P45379 298 aaPredicted RBP25.34■■□□□ 1.65
IRF3-209ENST00000595034 PANK3Q9H999 370 aa25.34■■□□□ 1.65
IRF3-209ENST00000595034 POLKQ9UBT6 870 aa25.34■■□□□ 1.65
IRF3-209ENST00000595034 AKT1S1Q96B36 256 aa25.33■■□□□ 1.65
IRF3-209ENST00000595034 SHANK3Q9BYB0 1731 aa25.33■■□□□ 1.65
IRF3-209ENST00000595034 POLD1P28340 1107 aa25.31■■□□□ 1.64
IRF3-209ENST00000595034 ANKRD26Q9UPS8 1709 aa25.3■■□□□ 1.64
IRF3-209ENST00000595034 MPRIPQ6WCQ1 1025 aa25.3■■□□□ 1.64
IRF3-209ENST00000595034 SMARCC1Q92922 1105 aaPredicted RBP25.3■■□□□ 1.64
IRF3-209ENST00000595034 ARXQ96QS3 562 aa25.3■■□□□ 1.64
IRF3-209ENST00000595034 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.3■■□□□ 1.64
IRF3-209ENST00000595034 KNSTRNQ9Y448 316 aa25.3■■□□□ 1.64
IRF3-209ENST00000595034 EYA1Q99502 592 aa25.29■■□□□ 1.64
IRF3-209ENST00000595034 NCAPD2Q15021 1401 aa25.29■■□□□ 1.64
IRF3-209ENST00000595034 CYP27B1O15528 508 aa25.28■■□□□ 1.64
IRF3-209ENST00000595034 MORC1Q86VD1 984 aa25.28■■□□□ 1.64
IRF3-209ENST00000595034 YY1P25490 414 aa25.27■■□□□ 1.64
IRF3-209ENST00000595034 FHDC1Q9C0D6 1143 aaPredicted RBP25.27■■□□□ 1.64
IRF3-209ENST00000595034 MSH5O43196 834 aa25.26■■□□□ 1.63
IRF3-209ENST00000595034 KCNQ4P56696 695 aa25.26■■□□□ 1.63
IRF3-209ENST00000595034 PALLDQ8WX93 1383 aa25.26■■□□□ 1.63
IRF3-209ENST00000595034 PLEKHG2Q9H7P9 1386 aa25.26■■□□□ 1.63
IRF3-209ENST00000595034 EIF4A2Q14240 407 aaKnown RBP25.25■■□□□ 1.63
IRF3-209ENST00000595034 IFNL2Q8IZJ0 200 aa25.25■■□□□ 1.63
IRF3-209ENST00000595034 SGIP1Q9BQI5 828 aa25.25■■□□□ 1.63
IRF3-209ENST00000595034 SYT17Q9BSW7 474 aa25.25■■□□□ 1.63
IRF3-209ENST00000595034 PNPLA7Q6ZV29 1317 aa25.25■■□□□ 1.63
IRF3-209ENST00000595034 LY75O60449 1722 aa25.25■■□□□ 1.63
IRF3-209ENST00000595034 MAP2P11137 1827 aaKnown RBP25.25■■□□□ 1.63
IRF3-209ENST00000595034 NKX1-1Q15270 411 aaPredicted RBP25.24■■□□□ 1.63
IRF3-209ENST00000595034 PKD1L3Q7Z443 1732 aa25.23■■□□□ 1.63
IRF3-209ENST00000595034 FLAD1Q8NFF5 587 aa25.23■■□□□ 1.63
IRF3-209ENST00000595034 QSER1Q2KHR3 1735 aa25.23■■□□□ 1.63
IRF3-209ENST00000595034 TMOD3Q9NYL9 352 aa25.22■■□□□ 1.63
IRF3-209ENST00000595034 MAP3K5Q99683 1374 aa25.2■■□□□ 1.63
IRF3-209ENST00000595034 HSP90AB1P08238 724 aaKnown RBP25.19■■□□□ 1.62
IRF3-209ENST00000595034 KLHL34Q8N239 644 aa25.19■■□□□ 1.62
IRF3-209ENST00000595034 IGSF1Q8N6C5 1336 aa25.18■■□□□ 1.62
IRF3-209ENST00000595034 PHKG2P15735 406 aa25.18■■□□□ 1.62
IRF3-209ENST00000595034 PLEKHO1Q53GL0 409 aaPredicted RBP25.18■■□□□ 1.62
IRF3-209ENST00000595034 PIGBQ92521 554 aa25.18■■□□□ 1.62
IRF3-209ENST00000595034 AK7Q96M32 723 aa25.18■■□□□ 1.62
IRF3-209ENST00000595034 AMOTQ4VCS5 1084 aa25.16■■□□□ 1.62
IRF3-209ENST00000595034 COL23A1Q86Y22 540 aaPredicted RBP25.14■■□□□ 1.62
IRF3-209ENST00000595034 C5P01031 1676 aa25.13■■□□□ 1.61
IRF3-209ENST00000595034 KIF7Q2M1P5 1343 aa25.13■■□□□ 1.61
IRF3-209ENST00000595034 TOGARAM1Q9Y4F4 1720 aa25.12■■□□□ 1.61
IRF3-209ENST00000595034 C1orf141Q5JVX7 400 aa25.12■■□□□ 1.61
IRF3-209ENST00000595034 DCAF5Q96JK2 942 aa25.12■■□□□ 1.61
IRF3-209ENST00000595034 LOC102724428A0A0B4J2F2 783 aa25.11■■□□□ 1.61
IRF3-209ENST00000595034 ERVV-2B6SEH9 535 aa25.11■■□□□ 1.61
IRF3-209ENST00000595034 SIK1P57059 783 aa25.11■■□□□ 1.61
IRF3-209ENST00000595034 GPR162Q16538 588 aa25.11■■□□□ 1.61
IRF3-209ENST00000595034 ZNF530Q6P9A1 599 aaPredicted RBP25.1■■□□□ 1.61
IRF3-209ENST00000595034 ITGB4P16144 1822 aa25.09■■□□□ 1.61
IRF3-209ENST00000595034 TUBGCP6Q96RT7 1819 aa25.08■■□□□ 1.61
IRF3-209ENST00000595034 ATP6V1AP38606 617 aa25.08■■□□□ 1.61
IRF3-209ENST00000595034 AMER1Q5JTC6 1135 aaPredicted RBP25.08■■□□□ 1.61
IRF3-209ENST00000595034 ASAP1Q9ULH1 1129 aa25.07■■□□□ 1.6
IRF3-209ENST00000595034 SSFA2P28290 1259 aa25.06■■□□□ 1.6
IRF3-209ENST00000595034 CABP4P57796 275 aa25.06■■□□□ 1.6
IRF3-209ENST00000595034 MSL1Q68DK7 614 aa25.06■■□□□ 1.6
IRF3-209ENST00000595034 SULT6B1Q6IMI4 303 aa25.06■■□□□ 1.6
IRF3-209ENST00000595034 C4BP0C0L5 1744 aa25.06■■□□□ 1.6
IRF3-209ENST00000595034 PHF14O94880 888 aa25.05■■□□□ 1.6
IRF3-209ENST00000595034 MTHFSP49914 203 aa25.05■■□□□ 1.6
IRF3-209ENST00000595034 PELP1Q8IZL8 1130 aaKnown RBP25.05■■□□□ 1.6
IRF3-209ENST00000595034 COL24A1Q17RW2 1714 aa25.04■■□□□ 1.6
IRF3-209ENST00000595034 ATG3Q9NT62 314 aa25.04■■□□□ 1.6
IRF3-209ENST00000595034 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms