RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 ZCRB1Q8TBF4 217 aaKnown RBP31.64■■■□□ 2.66
SSBP4-203ENST00000593641 FHDC1Q9C0D6 1143 aaPredicted RBP31.63■■■□□ 2.65
SSBP4-203ENST00000593641 QSER1Q2KHR3 1735 aa31.63■■■□□ 2.65
SSBP4-203ENST00000593641 SGIP1Q9BQI5 828 aa31.62■■■□□ 2.65
SSBP4-203ENST00000593641 PRIM1P49642 420 aaKnown RBP31.61■■■□□ 2.65
SSBP4-203ENST00000593641 SYT17Q9BSW7 474 aa31.61■■■□□ 2.65
SSBP4-203ENST00000593641 UTRNP46939 3433 aa31.61■■■□□ 2.65
SSBP4-203ENST00000593641 LY75O60449 1722 aa31.6■■■□□ 2.65
SSBP4-203ENST00000593641 CGNL1Q0VF96 1302 aa31.59■■■□□ 2.65
SSBP4-203ENST00000593641 ARXQ96QS3 562 aa31.59■■■□□ 2.65
SSBP4-203ENST00000593641 NBPF6Q5VWK0 638 aa31.58■■■□□ 2.65
SSBP4-203ENST00000593641 RAPGEF4Q8WZA2 1011 aa31.58■■■□□ 2.65
SSBP4-203ENST00000593641 AKT1S1Q96B36 256 aa31.58■■■□□ 2.65
SSBP4-203ENST00000593641 NBPF4Q96M43 638 aa31.58■■■□□ 2.65
SSBP4-203ENST00000593641 USHBP1Q8N6Y0 703 aa31.56■■■□□ 2.64
SSBP4-203ENST00000593641 TUBGCP6Q96RT7 1819 aa31.56■■■□□ 2.64
SSBP4-203ENST00000593641 NSD2O96028 1365 aa31.55■■■□□ 2.64
SSBP4-203ENST00000593641 FLT4P35916 1363 aa31.55■■■□□ 2.64
SSBP4-203ENST00000593641 SLC16A10Q8TF71 515 aa31.54■■■□□ 2.64
SSBP4-203ENST00000593641 INSRP06213 1382 aa31.54■■■□□ 2.64
SSBP4-203ENST00000593641 KIF24Q5T7B8 1368 aa31.54■■■□□ 2.64
SSBP4-203ENST00000593641 TFCP2L1Q9NZI6 479 aa31.53■■■□□ 2.64
SSBP4-203ENST00000593641 CHD4Q14839 1912 aa31.52■■■□□ 2.64
SSBP4-203ENST00000593641 TATP17735 454 aaPredicted RBP31.52■■■□□ 2.64
SSBP4-203ENST00000593641 HSP90AB2PQ58FF8 381 aa31.52■■■□□ 2.64
SSBP4-203ENST00000593641 MAP3K5Q99683 1374 aa31.51■■■□□ 2.63
SSBP4-203ENST00000593641 PNPLA7Q6ZV29 1317 aa31.5■■■□□ 2.63
SSBP4-203ENST00000593641 NSD3Q9BZ95 1437 aa31.5■■■□□ 2.63
SSBP4-203ENST00000593641 KCNQ4P56696 695 aa31.5■■■□□ 2.63
SSBP4-203ENST00000593641 CCNL1Q9UK58 526 aaPredicted RBP31.5■■■□□ 2.63
SSBP4-203ENST00000593641 POLD1P28340 1107 aa31.49■■■□□ 2.63
SSBP4-203ENST00000593641 PCDH11XQ9BZA7 1347 aa31.49■■■□□ 2.63
SSBP4-203ENST00000593641 PCDH11YQ9BZA8 1340 aa31.49■■■□□ 2.63
SSBP4-203ENST00000593641 TIMELESSQ9UNS1 1208 aa31.48■■■□□ 2.63
SSBP4-203ENST00000593641 COL24A1Q17RW2 1714 aa31.47■■■□□ 2.63
SSBP4-203ENST00000593641 CARD14Q9BXL6 1004 aa31.45■■■□□ 2.63
SSBP4-203ENST00000593641 KLHL34Q8N239 644 aa31.43■■■□□ 2.62
SSBP4-203ENST00000593641 EMILIN1Q9Y6C2 1016 aa31.42■■■□□ 2.62
SSBP4-203ENST00000593641 ANKRD26Q9UPS8 1709 aa31.41■■■□□ 2.62
SSBP4-203ENST00000593641 MAP2P11137 1827 aaKnown RBP31.41■■■□□ 2.62
SSBP4-203ENST00000593641 C5P01031 1676 aa31.41■■■□□ 2.62
SSBP4-203ENST00000593641 PKD1L3Q7Z443 1732 aa31.4■■■□□ 2.62
SSBP4-203ENST00000593641 PPM1GO15355 546 aaPredicted RBP31.39■■■□□ 2.62
SSBP4-203ENST00000593641 CLSPNQ9HAW4 1339 aa31.39■■■□□ 2.62
SSBP4-203ENST00000593641 ITGB4P16144 1822 aa31.38■■■□□ 2.61
SSBP4-203ENST00000593641 MSH5O43196 834 aa31.38■■■□□ 2.61
SSBP4-203ENST00000593641 HMGB2P26583 209 aaKnown RBP31.38■■■□□ 2.61
SSBP4-203ENST00000593641 TAF1LQ8IZX4 1826 aa31.37■■■□□ 2.61
SSBP4-203ENST00000593641 GPR162Q16538 588 aa31.36■■■□□ 2.61
SSBP4-203ENST00000593641 TOGARAM1Q9Y4F4 1720 aa31.35■■■□□ 2.61
SSBP4-203ENST00000593641 PALLDQ8WX93 1383 aa31.35■■■□□ 2.61
SSBP4-203ENST00000593641 CYP27B1O15528 508 aa31.35■■■□□ 2.61
SSBP4-203ENST00000593641 MPRIPQ6WCQ1 1025 aa31.35■■■□□ 2.61
SSBP4-203ENST00000593641 ZNF784Q8NCA9 323 aaPredicted RBP31.35■■■□□ 2.61
SSBP4-203ENST00000593641 GOLGB1Q14789 3259 aaKnown RBP31.34■■■□□ 2.61
SSBP4-203ENST00000593641 NCAPD2Q15021 1401 aa31.33■■■□□ 2.61
SSBP4-203ENST00000593641 POLR3GLQ9BT43 218 aa31.33■■■□□ 2.61
SSBP4-203ENST00000593641 PCGF6Q9BYE7 350 aa31.33■■■□□ 2.61
SSBP4-203ENST00000593641 COL23A1Q86Y22 540 aaPredicted RBP31.32■■■□□ 2.6
SSBP4-203ENST00000593641 WASHC2AQ641Q2 1341 aa31.31■■■□□ 2.6
SSBP4-203ENST00000593641 SMARCC1Q92922 1105 aaPredicted RBP31.3■■■□□ 2.6
SSBP4-203ENST00000593641 SPG7Q9UQ90 795 aa31.3■■■□□ 2.6
SSBP4-203ENST00000593641 PELP1Q8IZL8 1130 aaKnown RBP31.29■■■□□ 2.6
SSBP4-203ENST00000593641 FLAD1Q8NFF5 587 aa31.27■■■□□ 2.6
SSBP4-203ENST00000593641 EYA1Q99502 592 aa31.26■■■□□ 2.59
SSBP4-203ENST00000593641 C4BP0C0L5 1744 aa31.26■■■□□ 2.59
SSBP4-203ENST00000593641 MSL1Q68DK7 614 aa31.25■■■□□ 2.59
SSBP4-203ENST00000593641 NLGN2Q8NFZ4 835 aa31.25■■■□□ 2.59
SSBP4-203ENST00000593641 NKX1-1Q15270 411 aaPredicted RBP31.24■■■□□ 2.59
SSBP4-203ENST00000593641 POLKQ9UBT6 870 aa31.24■■■□□ 2.59
SSBP4-203ENST00000593641 AK7Q96M32 723 aa31.23■■■□□ 2.59
SSBP4-203ENST00000593641 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP31.23■■■□□ 2.593e-6■■□□□ 13.5
SSBP4-203ENST00000593641 PIGBQ92521 554 aa31.22■■■□□ 2.59
SSBP4-203ENST00000593641 TNNT2P45379 298 aaPredicted RBP31.21■■■□□ 2.59
SSBP4-203ENST00000593641 UBR3Q6ZT12 1888 aa31.21■■■□□ 2.59
SSBP4-203ENST00000593641 EIF4G2P78344 907 aaKnown RBP eCLIP31.2■■■□□ 2.59
SSBP4-203ENST00000593641 IFNL2Q8IZJ0 200 aa31.19■■■□□ 2.58
SSBP4-203ENST00000593641 TMOD3Q9NYL9 352 aa31.19■■■□□ 2.58
SSBP4-203ENST00000593641 EIF4A2Q14240 407 aaKnown RBP31.16■■■□□ 2.58
SSBP4-203ENST00000593641 LOC102724428A0A0B4J2F2 783 aa31.15■■■□□ 2.58
SSBP4-203ENST00000593641 GRIN3BO60391 1043 aa31.15■■■□□ 2.58
SSBP4-203ENST00000593641 PHKG2P15735 406 aa31.15■■■□□ 2.58
SSBP4-203ENST00000593641 SIK1P57059 783 aa31.15■■■□□ 2.58
SSBP4-203ENST00000593641 PLEKHG2Q9H7P9 1386 aa31.15■■■□□ 2.58
SSBP4-203ENST00000593641 PHF14O94880 888 aa31.14■■■□□ 2.58
SSBP4-203ENST00000593641 HSPA5P11021 654 aaKnown RBP31.14■■■□□ 2.58
SSBP4-203ENST00000593641 PANK3Q9H999 370 aa31.12■■■□□ 2.57
SSBP4-203ENST00000593641 CD2APQ9Y5K6 639 aa31.12■■■□□ 2.57
SSBP4-203ENST00000593641 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP31.11■■■□□ 2.57
SSBP4-203ENST00000593641 YBX3P16989 372 aaKnown RBP eCLIP31.1■■■□□ 2.573e-6■■□□□ 12.9
SSBP4-203ENST00000593641 SSFA2P28290 1259 aa31.1■■■□□ 2.57
SSBP4-203ENST00000593641 ASAP1Q9ULH1 1129 aa31.1■■■□□ 2.57
SSBP4-203ENST00000593641 IGSF1Q8N6C5 1336 aa31.09■■■□□ 2.57
SSBP4-203ENST00000593641 AMIGO3Q86WK7 504 aa31.09■■■□□ 2.57
SSBP4-203ENST00000593641 LINC00116Q8NCU8 138 aa31.09■■■□□ 2.57
SSBP4-203ENST00000593641 ATP6V1AP38606 617 aa31.07■■■□□ 2.56
SSBP4-203ENST00000593641 SMIM5Q71RC9 77 aa31.05■■■□□ 2.56
SSBP4-203ENST00000593641 GNPATO15228 680 aa31.04■■■□□ 2.56
SSBP4-203ENST00000593641 HSP90AB1P08238 724 aaKnown RBP31.04■■■□□ 2.56
SSBP4-203ENST00000593641 C1QTNF8P60827 252 aa31.04■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms