RNA–Protein interactions for RNA: ENST00000593504.5

SYMPK-202, Transcript of symplekin, humanhuman

TSL 2

Gene SYMPK, Length 5,107 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-202ENST00000593504 SPINK5Q9NQ38 1064 aaPredicted RBP18.35■□□□□ 0.53
SYMPK-202ENST00000593504 KDM5DQ9BY66 1539 aa18.34■□□□□ 0.53
SYMPK-202ENST00000593504 FAM177BA6PVY3 158 aa18.34■□□□□ 0.53
SYMPK-202ENST00000593504 FLIIQ13045 1269 aa18.34■□□□□ 0.53
SYMPK-202ENST00000593504 AACSQ86V21 672 aa18.34■□□□□ 0.53
SYMPK-202ENST00000593504 PCDHB15Q9Y5E8 787 aa18.34■□□□□ 0.53
SYMPK-202ENST00000593504 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.34■□□□□ 0.53
SYMPK-202ENST00000593504 PTPRTO14522 1441 aa18.33■□□□□ 0.53
SYMPK-202ENST00000593504 YEATS2Q9ULM3 1422 aa18.33■□□□□ 0.52
SYMPK-202ENST00000593504 TRAK2O60296 914 aa18.33■□□□□ 0.52
SYMPK-202ENST00000593504 NUTM1Q86Y26 1132 aa18.33■□□□□ 0.52
SYMPK-202ENST00000593504 ARHGAP45Q92619 1136 aa18.33■□□□□ 0.52
SYMPK-202ENST00000593504 TRPM2O94759 1503 aa18.32■□□□□ 0.52
SYMPK-202ENST00000593504 AKAP17AQ02040 695 aaKnown RBP18.32■□□□□ 0.52
SYMPK-202ENST00000593504 TNNQ9UQP3 1299 aa18.32■□□□□ 0.52
SYMPK-202ENST00000593504 PHACTR3Q96KR7 559 aa18.31■□□□□ 0.52
SYMPK-202ENST00000593504 ZMYM4Q5VZL5 1548 aa18.31■□□□□ 0.52
SYMPK-202ENST00000593504 C8orf58Q8NAV2 365 aa18.31■□□□□ 0.52
SYMPK-202ENST00000593504 MX1P20591 662 aa18.31■□□□□ 0.52
SYMPK-202ENST00000593504 RALYLQ86SE5 291 aaKnown RBP18.31■□□□□ 0.52
SYMPK-202ENST00000593504 LRRFIP2Q9Y608 721 aaKnown RBP18.31■□□□□ 0.52
SYMPK-202ENST00000593504 DNAAF4Q8WXU2 420 aa18.3■□□□□ 0.52
SYMPK-202ENST00000593504 ZFYVE16Q7Z3T8 1539 aa18.3■□□□□ 0.52
SYMPK-202ENST00000593504 ANKRD24Q8TF21 1146 aa18.3■□□□□ 0.52
SYMPK-202ENST00000593504 KIF1BPQ96EK5 621 aa18.3■□□□□ 0.52
SYMPK-202ENST00000593504 FOSBP53539 338 aa18.29■□□□□ 0.52
SYMPK-202ENST00000593504 HDAC1Q13547 482 aaPredicted RBP18.29■□□□□ 0.52
SYMPK-202ENST00000593504 NFXL1Q6ZNB6 911 aa18.29■□□□□ 0.52
SYMPK-202ENST00000593504 MRPL50Q8N5N7 158 aaKnown RBP18.29■□□□□ 0.52
SYMPK-202ENST00000593504 UGGT1Q9NYU2 1555 aa18.29■□□□□ 0.52
SYMPK-202ENST00000593504 RASSF8Q8NHQ8 419 aa18.29■□□□□ 0.52
SYMPK-202ENST00000593504 DBF4Q9UBU7 674 aaPredicted RBP18.29■□□□□ 0.52
SYMPK-202ENST00000593504 BLMP54132 1417 aaPredicted RBP18.29■□□□□ 0.52
SYMPK-202ENST00000593504 TRIM29Q14134 588 aa18.29■□□□□ 0.52
SYMPK-202ENST00000593504 KDM5AP29375 1690 aaKnown RBP18.29■□□□□ 0.52
SYMPK-202ENST00000593504 BICD2Q8TD16 824 aa18.29■□□□□ 0.52
SYMPK-202ENST00000593504 NUTM2BA6NNL0 878 aaPredicted RBP18.28■□□□□ 0.52
SYMPK-202ENST00000593504 NUTM2EB1AL46 878 aaPredicted RBP18.28■□□□□ 0.52
SYMPK-202ENST00000593504 RAB11FIP3O75154 756 aa18.28■□□□□ 0.52
SYMPK-202ENST00000593504 RLBP1P12271 317 aa18.28■□□□□ 0.52
SYMPK-202ENST00000593504 LARP1Q6PKG0 1096 aaKnown RBP18.28■□□□□ 0.52
SYMPK-202ENST00000593504 NUTM2AQ8IVF1 878 aaPredicted RBP18.28■□□□□ 0.52
SYMPK-202ENST00000593504 NOL10Q9BSC4 688 aaKnown RBP18.28■□□□□ 0.52
SYMPK-202ENST00000593504 CNNM1Q9NRU3 951 aa18.28■□□□□ 0.52
SYMPK-202ENST00000593504 TBX22Q9Y458 520 aa18.28■□□□□ 0.52
SYMPK-202ENST00000593504 CCDC158Q5M9N0 1113 aa18.28■□□□□ 0.52
SYMPK-202ENST00000593504 FLT4P35916 1363 aa18.28■□□□□ 0.52
SYMPK-202ENST00000593504 CWC27Q6UX04 472 aaKnown RBP18.27■□□□□ 0.52
SYMPK-202ENST00000593504 KCNA6P17658 529 aa18.27■□□□□ 0.52
SYMPK-202ENST00000593504 PLA2R1Q13018 1463 aa18.27■□□□□ 0.52
SYMPK-202ENST00000593504 INSRP06213 1382 aa18.27■□□□□ 0.51
SYMPK-202ENST00000593504 PTCD1O75127 700 aaKnown RBP18.27■□□□□ 0.51
SYMPK-202ENST00000593504 TTC39AQ5SRH9 613 aa18.27■□□□□ 0.51
SYMPK-202ENST00000593504 CWC22Q9HCG8 908 aaKnown RBP18.27■□□□□ 0.51
SYMPK-202ENST00000593504 MAGI2Q86UL8 1455 aa18.26■□□□□ 0.51
SYMPK-202ENST00000593504 MTHFSDQ2M296 383 aaKnown RBP18.26■□□□□ 0.51
SYMPK-202ENST00000593504 CCDC57Q2TAC2 916 aa18.26■□□□□ 0.51
SYMPK-202ENST00000593504 TBC1D2BQ9UPU7 963 aa18.26■□□□□ 0.51
SYMPK-202ENST00000593504 TSPYL6Q8N831 410 aa18.26■□□□□ 0.51
SYMPK-202ENST00000593504 CYP46A1Q9Y6A2 500 aa18.26■□□□□ 0.51
SYMPK-202ENST00000593504 MLH3Q9UHC1 1453 aa18.26■□□□□ 0.51
SYMPK-202ENST00000593504 EDC4Q6P2E9 1401 aaKnown RBP18.26■□□□□ 0.51
SYMPK-202ENST00000593504 MYD88Q99836 296 aa18.26■□□□□ 0.51
SYMPK-202ENST00000593504 HYPKQ9NX55 129 aa18.25■□□□□ 0.51
SYMPK-202ENST00000593504 VAMP4O75379 141 aa18.25■□□□□ 0.51
SYMPK-202ENST00000593504 AMOTL1Q8IY63 956 aa18.25■□□□□ 0.51
SYMPK-202ENST00000593504 GOLGA6L19H0YKK7 550 aa18.25■□□□□ 0.51
SYMPK-202ENST00000593504 SBNO2Q9Y2G9 1366 aa18.25■□□□□ 0.51
SYMPK-202ENST00000593504 ERICH2A1L162 156 aa18.24■□□□□ 0.51
SYMPK-202ENST00000593504 PRPF40AO75400 957 aaKnown RBP18.24■□□□□ 0.51
SYMPK-202ENST00000593504 DMRT2Q9Y5R5 561 aa18.24■□□□□ 0.51
SYMPK-202ENST00000593504 PIK3R4Q99570 1358 aa18.24■□□□□ 0.51
SYMPK-202ENST00000593504 HSP90AA2PQ14568 343 aaPredicted RBP18.24■□□□□ 0.51
SYMPK-202ENST00000593504 BMP2KLQ5H9B9 411 aa18.24■□□□□ 0.51
SYMPK-202ENST00000593504 CADPS2Q86UW7 1296 aa18.24■□□□□ 0.51
SYMPK-202ENST00000593504 PLXNC1O60486 1568 aa18.24■□□□□ 0.51
SYMPK-202ENST00000593504 BECN2A8MW95 431 aa18.24■□□□□ 0.51
SYMPK-202ENST00000593504 NUCB1Q02818 461 aa18.24■□□□□ 0.51
SYMPK-202ENST00000593504 MYOM2P54296 1465 aa18.23■□□□□ 0.51
SYMPK-202ENST00000593504 CAVIN1Q6NZI2 390 aaKnown RBP18.23■□□□□ 0.51
SYMPK-202ENST00000593504 CIZ1Q9ULV3 898 aaPredicted RBP18.23■□□□□ 0.51
SYMPK-202ENST00000593504 GLRX3O76003 335 aaKnown RBP18.22■□□□□ 0.51
SYMPK-202ENST00000593504 MRE11P49959 708 aa18.22■□□□□ 0.51
SYMPK-202ENST00000593504 CHRNA2Q15822 529 aa18.22■□□□□ 0.51
SYMPK-202ENST00000593504 MEIS3Q99687 375 aa18.22■□□□□ 0.51
SYMPK-202ENST00000593504 MAP3K19Q56UN5 1328 aa18.22■□□□□ 0.51
SYMPK-202ENST00000593504 IFNL2Q8IZJ0 200 aa18.22■□□□□ 0.51
SYMPK-202ENST00000593504 TMOD3Q9NYL9 352 aa18.22■□□□□ 0.51
SYMPK-202ENST00000593504 IL13P35225 146 aa18.22■□□□□ 0.51
SYMPK-202ENST00000593504 EYA1Q99502 592 aa18.22■□□□□ 0.51
SYMPK-202ENST00000593504 ERVK-7P63135 1459 aa18.22■□□□□ 0.51
SYMPK-202ENST00000593504 PI4KAP2A4QPH2 592 aa18.22■□□□□ 0.51
SYMPK-202ENST00000593504 PI4KAP1Q8N8J0 262 aa18.22■□□□□ 0.51
SYMPK-202ENST00000593504 MAP3K2Q9Y2U5 619 aa18.22■□□□□ 0.51
SYMPK-202ENST00000593504 CEP126Q9P2H0 1117 aa18.21■□□□□ 0.51
SYMPK-202ENST00000593504 FMNL2Q96PY5 1086 aa18.21■□□□□ 0.51
SYMPK-202ENST00000593504 STARD3NLO95772 234 aa18.21■□□□□ 0.51
SYMPK-202ENST00000593504 ANXA1P04083 346 aa18.21■□□□□ 0.51
SYMPK-202ENST00000593504 TBC1D9Q6ZT07 1266 aa18.21■□□□□ 0.51
SYMPK-202ENST00000593504 SHROOM2Q13796 1616 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms