RNA–Protein interactions for RNA: ENST00000592965.2

MBD3-211, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 4

Gene MBD3, Length 568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-211ENST00000592965 PAPPAQ13219 1627 aa32.23■■■□□ 2.75
MBD3-211ENST00000592965 ZCRB1Q8TBF4 217 aaKnown RBP32.22■■■□□ 2.75
MBD3-211ENST00000592965 SPON1Q9HCB6 807 aa32.22■■■□□ 2.75
MBD3-211ENST00000592965 MAP2P11137 1827 aaKnown RBP32.21■■■□□ 2.75
MBD3-211ENST00000592965 STK32BQ9NY57 414 aa32.2■■■□□ 2.75
MBD3-211ENST00000592965 POLR3GLQ9BT43 218 aa32.19■■■□□ 2.74
MBD3-211ENST00000592965 EMILIN1Q9Y6C2 1016 aa32.19■■■□□ 2.74
MBD3-211ENST00000592965 USHBP1Q8N6Y0 703 aa32.18■■■□□ 2.74
MBD3-211ENST00000592965 SLC15A2Q16348 729 aa32.17■■■□□ 2.74
MBD3-211ENST00000592965 RAPGEF4Q8WZA2 1011 aa32.17■■■□□ 2.74
MBD3-211ENST00000592965 NCAPD2Q15021 1401 aa32.14■■■□□ 2.74
MBD3-211ENST00000592965 TATP17735 454 aaPredicted RBP32.13■■■□□ 2.73
MBD3-211ENST00000592965 PDGFDQ9GZP0 370 aaPredicted RBP32.13■■■□□ 2.73
MBD3-211ENST00000592965 NSD2O96028 1365 aa32.12■■■□□ 2.73
MBD3-211ENST00000592965 LY75O60449 1722 aa32.12■■■□□ 2.73
MBD3-211ENST00000592965 PKD1L3Q7Z443 1732 aa32.12■■■□□ 2.73
MBD3-211ENST00000592965 WASHC2AQ641Q2 1341 aa32.11■■■□□ 2.73
MBD3-211ENST00000592965 PRIM1P49642 420 aaKnown RBP32.11■■■□□ 2.73
MBD3-211ENST00000592965 PPM1GO15355 546 aaPredicted RBP32.09■■■□□ 2.73
MBD3-211ENST00000592965 SYTL4Q96C24 671 aaPredicted RBP32.09■■■□□ 2.73
MBD3-211ENST00000592965 LRRC4BQ9NT99 713 aa32.09■■■□□ 2.73
MBD3-211ENST00000592965 PPP1R1BQ9UD71 204 aaPredicted RBP32.09■■■□□ 2.73
MBD3-211ENST00000592965 PCDH11XQ9BZA7 1347 aa32.08■■■□□ 2.73
MBD3-211ENST00000592965 PCDH11YQ9BZA8 1340 aa32.08■■■□□ 2.73
MBD3-211ENST00000592965 SLC27A3Q5K4L6 730 aa32.08■■■□□ 2.73
MBD3-211ENST00000592965 QSER1Q2KHR3 1735 aa32.07■■■□□ 2.72
MBD3-211ENST00000592965 PANK3Q9H999 370 aa32.07■■■□□ 2.72
MBD3-211ENST00000592965 POLKQ9UBT6 870 aa32.07■■■□□ 2.72
MBD3-211ENST00000592965 ZBTB7AO95365 584 aa32.06■■■□□ 2.72
MBD3-211ENST00000592965 ZNF827Q17R98 1081 aa32.03■■■□□ 2.72
MBD3-211ENST00000592965 PTGER2P43116 358 aa32.01■■■□□ 2.71
MBD3-211ENST00000592965 MTFR1LQ9H019 292 aa32.01■■■□□ 2.71
MBD3-211ENST00000592965 TOGARAM1Q9Y4F4 1720 aa32■■■□□ 2.71
MBD3-211ENST00000592965 AKT1S1Q96B36 256 aa32■■■□□ 2.71
MBD3-211ENST00000592965 TUBGCP6Q96RT7 1819 aa31.99■■■□□ 2.71
MBD3-211ENST00000592965 CYP27B1O15528 508 aa31.99■■■□□ 2.71
MBD3-211ENST00000592965 ITGB4P16144 1822 aa31.98■■■□□ 2.71
MBD3-211ENST00000592965 TNNT2P45379 298 aaPredicted RBP31.98■■■□□ 2.71
MBD3-211ENST00000592965 EYA1Q99502 592 aa31.98■■■□□ 2.71
MBD3-211ENST00000592965 ATF5Q9Y2D1 282 aaPredicted RBP31.98■■■□□ 2.71
MBD3-211ENST00000592965 PLEKHG2Q9H7P9 1386 aa31.94■■■□□ 2.7
MBD3-211ENST00000592965 EIF4A2Q14240 407 aaKnown RBP31.94■■■□□ 2.7
MBD3-211ENST00000592965 SGIP1Q9BQI5 828 aa31.94■■■□□ 2.7
MBD3-211ENST00000592965 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP31.94■■■□□ 2.7
MBD3-211ENST00000592965 SPG7Q9UQ90 795 aa31.94■■■□□ 2.7
MBD3-211ENST00000592965 CCNL1Q9UK58 526 aaPredicted RBP31.93■■■□□ 2.7
MBD3-211ENST00000592965 KCNQ4P56696 695 aa31.92■■■□□ 2.7
MBD3-211ENST00000592965 NKX1-1Q15270 411 aaPredicted RBP31.91■■■□□ 2.7
MBD3-211ENST00000592965 KIF7Q2M1P5 1343 aa31.91■■■□□ 2.7
MBD3-211ENST00000592965 COL24A1Q17RW2 1714 aa31.91■■■□□ 2.7
MBD3-211ENST00000592965 C5P01031 1676 aa31.9■■■□□ 2.7
MBD3-211ENST00000592965 KNSTRNQ9Y448 316 aa31.89■■■□□ 2.7
MBD3-211ENST00000592965 PNPLA7Q6ZV29 1317 aa31.89■■■□□ 2.7
MBD3-211ENST00000592965 IGSF1Q8N6C5 1336 aa31.89■■■□□ 2.7
MBD3-211ENST00000592965 TAF1LQ8IZX4 1826 aa31.89■■■□□ 2.69
MBD3-211ENST00000592965 MORC1Q86VD1 984 aa31.88■■■□□ 2.69
MBD3-211ENST00000592965 SLC16A10Q8TF71 515 aa31.88■■■□□ 2.69
MBD3-211ENST00000592965 PALLDQ8WX93 1383 aa31.87■■■□□ 2.69
MBD3-211ENST00000592965 MPRIPQ6WCQ1 1025 aa31.87■■■□□ 2.69
MBD3-211ENST00000592965 TFCP2L1Q9NZI6 479 aa31.87■■■□□ 2.69
MBD3-211ENST00000592965 HMGB2P26583 209 aaKnown RBP31.83■■■□□ 2.69
MBD3-211ENST00000592965 AMER1Q5JTC6 1135 aaPredicted RBP31.83■■■□□ 2.69
MBD3-211ENST00000592965 SMARCC1Q92922 1105 aaPredicted RBP31.82■■■□□ 2.68
MBD3-211ENST00000592965 ARXQ96QS3 562 aa31.82■■■□□ 2.68
MBD3-211ENST00000592965 FHDC1Q9C0D6 1143 aaPredicted RBP31.82■■■□□ 2.68
MBD3-211ENST00000592965 DCAF8L1A6NGE4 600 aa31.81■■■□□ 2.68
MBD3-211ENST00000592965 PHKG2P15735 406 aa31.81■■■□□ 2.68
MBD3-211ENST00000592965 IFNL2Q8IZJ0 200 aa31.81■■■□□ 2.68
MBD3-211ENST00000592965 MAP3K5Q99683 1374 aa31.81■■■□□ 2.68
MBD3-211ENST00000592965 PIGBQ92521 554 aa31.8■■■□□ 2.68
MBD3-211ENST00000592965 SYT17Q9BSW7 474 aa31.79■■■□□ 2.68
MBD3-211ENST00000592965 C4BP0C0L5 1744 aa31.78■■■□□ 2.68
MBD3-211ENST00000592965 TMOD3Q9NYL9 352 aa31.75■■■□□ 2.67
MBD3-211ENST00000592965 POLD1P28340 1107 aa31.74■■■□□ 2.67
MBD3-211ENST00000592965 PER1O15534 1290 aaPredicted RBP31.72■■■□□ 2.67
MBD3-211ENST00000592965 COL23A1Q86Y22 540 aaPredicted RBP31.72■■■□□ 2.67
MBD3-211ENST00000592965 UBR3Q6ZT12 1888 aa31.72■■■□□ 2.67
MBD3-211ENST00000592965 KDRP35968 1356 aa31.71■■■□□ 2.67
MBD3-211ENST00000592965 PLEKHO1Q53GL0 409 aaPredicted RBP31.71■■■□□ 2.67
MBD3-211ENST00000592965 AMOTQ4VCS5 1084 aa31.7■■■□□ 2.67
MBD3-211ENST00000592965 AEBP1Q8IUX7 1158 aa31.7■■■□□ 2.67
MBD3-211ENST00000592965 HSP90AB1P08238 724 aaKnown RBP31.69■■■□□ 2.66
MBD3-211ENST00000592965 IL13P35225 146 aa31.69■■■□□ 2.66
MBD3-211ENST00000592965 FLAD1Q8NFF5 587 aa31.69■■■□□ 2.66
MBD3-211ENST00000592965 LOC102724428A0A0B4J2F2 783 aa31.68■■■□□ 2.66
MBD3-211ENST00000592965 SIK1P57059 783 aa31.68■■■□□ 2.66
MBD3-211ENST00000592965 UTRNP46939 3433 aa31.68■■■□□ 2.66
MBD3-211ENST00000592965 MSH5O43196 834 aa31.67■■■□□ 2.66
MBD3-211ENST00000592965 DCAF5Q96JK2 942 aa31.67■■■□□ 2.66
MBD3-211ENST00000592965 ASAP1Q9ULH1 1129 aa31.67■■■□□ 2.66
MBD3-211ENST00000592965 ERVV-2B6SEH9 535 aa31.66■■■□□ 2.66
MBD3-211ENST00000592965 YY1P25490 414 aa31.66■■■□□ 2.66
MBD3-211ENST00000592965 ZNF530Q6P9A1 599 aaPredicted RBP31.66■■■□□ 2.66
MBD3-211ENST00000592965 KDM6AO15550 1401 aaPredicted RBP31.66■■■□□ 2.66
MBD3-211ENST00000592965 ZNF831Q5JPB2 1677 aa31.65■■■□□ 2.66
MBD3-211ENST00000592965 SULT6B1Q6IMI4 303 aa31.65■■■□□ 2.66
MBD3-211ENST00000592965 AK7Q96M32 723 aa31.65■■■□□ 2.66
MBD3-211ENST00000592965 NPC1L1Q9UHC9 1359 aa31.65■■■□□ 2.66
MBD3-211ENST00000592965 ATG3Q9NT62 314 aa31.64■■■□□ 2.66
MBD3-211ENST00000592965 MTHFSP49914 203 aa31.63■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms