RNA–Protein interactions for RNA: ENST00000592573.1

RDH13-221, Transcript of retinol dehydrogenase 13, humanhuman

TSL 2

Gene RDH13, Length 1,481 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH13-221ENST00000592573 THSD7AQ9UPZ6 1657 aa23.68■■□□□ 1.38
RDH13-221ENST00000592573 DDB1Q16531 1140 aa23.68■■□□□ 1.38
RDH13-221ENST00000592573 OVOS2A0A0G2JMS6 1433 aa23.67■■□□□ 1.38
RDH13-221ENST00000592573 CCDC146Q8IYE0 955 aa23.67■■□□□ 1.38
RDH13-221ENST00000592573 WNK3Q9BYP7 1800 aa23.66■■□□□ 1.38
RDH13-221ENST00000592573 DDX54Q8TDD1 881 aaKnown RBP23.66■■□□□ 1.38
RDH13-221ENST00000592573 PNISRQ8TF01 805 aaKnown RBP23.66■■□□□ 1.38
RDH13-221ENST00000592573 CDCA7Q9BWT1 371 aaPredicted RBP23.66■■□□□ 1.38
RDH13-221ENST00000592573 EXOC5O00471 708 aa23.65■■□□□ 1.38
RDH13-221ENST00000592573 ZCRB1Q8TBF4 217 aaKnown RBP23.65■■□□□ 1.38
RDH13-221ENST00000592573 PHACTR3Q96KR7 559 aa23.65■■□□□ 1.38
RDH13-221ENST00000592573 LRRC37A3O60309 1634 aa23.64■■□□□ 1.38
RDH13-221ENST00000592573 SENP3-EIF4A1A0A087X0R7 540 aa23.64■■□□□ 1.38
RDH13-221ENST00000592573 FAM9BQ8IZU0 186 aa23.64■■□□□ 1.38
RDH13-221ENST00000592573 CCER2I3L3R5 266 aa23.63■■□□□ 1.37
RDH13-221ENST00000592573 PDE3BQ13370 1112 aa23.63■■□□□ 1.37
RDH13-221ENST00000592573 FCHSD2O94868 740 aa23.62■■□□□ 1.37
RDH13-221ENST00000592573 TNS2Q63HR2 1409 aa23.62■■□□□ 1.37
RDH13-221ENST00000592573 KRT27Q7Z3Y8 459 aa23.62■■□□□ 1.37
RDH13-221ENST00000592573 MARCH10Q8NA82 808 aaPredicted RBP23.62■■□□□ 1.37
RDH13-221ENST00000592573 PARP4Q9UKK3 1724 aaKnown RBP23.61■■□□□ 1.37
RDH13-221ENST00000592573 PLEKHO1Q53GL0 409 aaPredicted RBP23.61■■□□□ 1.37
RDH13-221ENST00000592573 MTHFSDQ2M296 383 aaKnown RBP23.6■■□□□ 1.37
RDH13-221ENST00000592573 ZNF530Q6P9A1 599 aaPredicted RBP23.6■■□□□ 1.37
RDH13-221ENST00000592573 PLEKHF1Q96S99 279 aa23.6■■□□□ 1.37
RDH13-221ENST00000592573 SPG7Q9UQ90 795 aa23.6■■□□□ 1.37
RDH13-221ENST00000592573 CYP27B1O15528 508 aa23.59■■□□□ 1.37
RDH13-221ENST00000592573 BRWD3Q6RI45 1802 aa23.59■■□□□ 1.37
RDH13-221ENST00000592573 PCDH11XQ9BZA7 1347 aa23.56■■□□□ 1.36
RDH13-221ENST00000592573 PCDH11YQ9BZA8 1340 aa23.56■■□□□ 1.36
RDH13-221ENST00000592573 AMOTQ4VCS5 1084 aa23.56■■□□□ 1.36
RDH13-221ENST00000592573 SHANK3Q9BYB0 1731 aa23.55■■□□□ 1.36
RDH13-221ENST00000592573 MAPK8IP3Q9UPT6 1336 aa23.55■■□□□ 1.36
RDH13-221ENST00000592573 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.55■■□□□ 1.36
RDH13-221ENST00000592573 RRP7AQ9Y3A4 280 aaKnown RBP23.55■■□□□ 1.36
RDH13-221ENST00000592573 PKD1L3Q7Z443 1732 aa23.54■■□□□ 1.36
RDH13-221ENST00000592573 PHKG2P15735 406 aa23.54■■□□□ 1.36
RDH13-221ENST00000592573 RUNDC1Q96C34 613 aa23.53■■□□□ 1.36
RDH13-221ENST00000592573 NEFMP07197 916 aa23.52■■□□□ 1.36
RDH13-221ENST00000592573 C1orf141Q5JVX7 400 aa23.52■■□□□ 1.36
RDH13-221ENST00000592573 IFNL2Q8IZJ0 200 aa23.52■■□□□ 1.36
RDH13-221ENST00000592573 ACSBG1Q96GR2 724 aa23.52■■□□□ 1.36
RDH13-221ENST00000592573 NEUROD2Q15784 382 aa23.51■■□□□ 1.35
RDH13-221ENST00000592573 MPRIPQ6WCQ1 1025 aa23.51■■□□□ 1.35
RDH13-221ENST00000592573 PNNQ9H307 717 aaKnown RBP23.51■■□□□ 1.35
RDH13-221ENST00000592573 GAS2L2Q8NHY3 880 aa23.5■■□□□ 1.35
RDH13-221ENST00000592573 APAF1O14727 1248 aa23.49■■□□□ 1.35
RDH13-221ENST00000592573 NFE2L2Q16236 605 aa23.49■■□□□ 1.35
RDH13-221ENST00000592573 PTF1AQ7RTS3 328 aa23.49■■□□□ 1.35
RDH13-221ENST00000592573 AKAP4Q5JQC9 854 aa23.48■■□□□ 1.35
RDH13-221ENST00000592573 LGR6Q9HBX8 967 aa23.48■■□□□ 1.35
RDH13-221ENST00000592573 KCNQ2O43526 872 aa23.47■■□□□ 1.35
RDH13-221ENST00000592573 DCTN1Q14203 1278 aa23.47■■□□□ 1.35
RDH13-221ENST00000592573 MAP3K5Q99683 1374 aa23.46■■□□□ 1.35
RDH13-221ENST00000592573 PLEKHG2Q9H7P9 1386 aa23.46■■□□□ 1.35
RDH13-221ENST00000592573 TMPOP42166 694 aaKnown RBP23.46■■□□□ 1.35
RDH13-221ENST00000592573 FAM196AQ6ZSG2 479 aa23.46■■□□□ 1.35
RDH13-221ENST00000592573 SYTL4Q96C24 671 aaPredicted RBP23.46■■□□□ 1.35
RDH13-221ENST00000592573 SALL2Q9Y467 1007 aaPredicted RBP23.46■■□□□ 1.35
RDH13-221ENST00000592573 KDM6AO15550 1401 aaPredicted RBP23.46■■□□□ 1.35
RDH13-221ENST00000592573 GNAT3A8MTJ3 354 aa23.45■■□□□ 1.34
RDH13-221ENST00000592573 RIPK4P57078 832 aa23.45■■□□□ 1.34
RDH13-221ENST00000592573 MCM10Q7L590 875 aa23.45■■□□□ 1.34
RDH13-221ENST00000592573 EP400Q96L91 3159 aa23.45■■□□□ 1.34
RDH13-221ENST00000592573 TRIM37O94972 964 aa23.44■■□□□ 1.34
RDH13-221ENST00000592573 PRIM1P49642 420 aaKnown RBP23.44■■□□□ 1.34
RDH13-221ENST00000592573 NKX1-1Q15270 411 aaPredicted RBP23.44■■□□□ 1.34
RDH13-221ENST00000592573 THUMPD2Q9BTF0 503 aaKnown RBP23.44■■□□□ 1.34
RDH13-221ENST00000592573 RNMTO43148 476 aaKnown RBP23.43■■□□□ 1.34
RDH13-221ENST00000592573 IL17REQ8NFR9 667 aa23.43■■□□□ 1.34
RDH13-221ENST00000592573 DCAF5Q96JK2 942 aa23.43■■□□□ 1.34
RDH13-221ENST00000592573 SOCS7O14512 581 aa23.41■■□□□ 1.34
RDH13-221ENST00000592573 HSP90AB1P08238 724 aaKnown RBP23.41■■□□□ 1.34
RDH13-221ENST00000592573 TOGARAM1Q9Y4F4 1720 aa23.4■■□□□ 1.34
RDH13-221ENST00000592573 RTF1Q92541 710 aaKnown RBP23.4■■□□□ 1.34
RDH13-221ENST00000592573 DOT1LQ8TEK3 1739 aa23.39■■□□□ 1.33
RDH13-221ENST00000592573 TRIM35Q9UPQ4 493 aa23.38■■□□□ 1.33
RDH13-221ENST00000592573 CABP4P57796 275 aa23.37■■□□□ 1.33
RDH13-221ENST00000592573 BCL9O00512 1426 aa23.37■■□□□ 1.33
RDH13-221ENST00000592573 NFATC2IPQ8NCF5 419 aa23.36■■□□□ 1.33
RDH13-221ENST00000592573 PIGBQ92521 554 aa23.36■■□□□ 1.33
RDH13-221ENST00000592573 TMOD3Q9NYL9 352 aa23.35■■□□□ 1.33
RDH13-221ENST00000592573 DLG5Q8TDM6 1919 aa23.34■■□□□ 1.33
RDH13-221ENST00000592573 ERVV-2B6SEH9 535 aa23.34■■□□□ 1.33
RDH13-221ENST00000592573 BCL11BQ9C0K0 894 aaPredicted RBP23.34■■□□□ 1.33
RDH13-221ENST00000592573 SLC52A2Q9HAB3 445 aa23.34■■□□□ 1.33
RDH13-221ENST00000592573 HTATSF1O43719 755 aaKnown RBP23.33■■□□□ 1.33
RDH13-221ENST00000592573 CEMIPQ8WUJ3 1361 aa23.32■■□□□ 1.32
RDH13-221ENST00000592573 TEFQ10587 303 aa23.32■■□□□ 1.32
RDH13-221ENST00000592573 MIS18AQ9NYP9 233 aa23.32■■□□□ 1.32
RDH13-221ENST00000592573 APBA3O96018 575 aa23.31■■□□□ 1.32
RDH13-221ENST00000592573 LMOD3Q0VAK6 560 aa23.31■■□□□ 1.32
RDH13-221ENST00000592573 UPF1Q92900 1129 aaKnown RBP eCLIP23.31■■□□□ 1.322e-8■■■□□ 17.5
RDH13-221ENST00000592573 NHSQ6T4R5 1651 aa23.31■■□□□ 1.32
RDH13-221ENST00000592573 SBF2Q86WG5 1849 aa23.31■■□□□ 1.32
RDH13-221ENST00000592573 KAT6BQ8WYB5 2073 aa23.31■■□□□ 1.32
RDH13-221ENST00000592573 SLC39A6Q13433 755 aa23.3■■□□□ 1.32
RDH13-221ENST00000592573 ASAP1Q9ULH1 1129 aa23.3■■□□□ 1.32
RDH13-221ENST00000592573 SCN11AQ9UI33 1791 aa23.3■■□□□ 1.32
RDH13-221ENST00000592573 ADAMTS7Q9UKP4 1686 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 158.8 ms