RNA–Protein interactions for RNA: ENST00000592540.5

SPC24-206, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPC24, Length 2,315 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-206ENST00000592540 LMOD3Q0VAK6 560 aa22.07■■□□□ 1.12
SPC24-206ENST00000592540 R3HCC1Q9Y3T6 440 aaKnown RBP22.07■■□□□ 1.12
SPC24-206ENST00000592540 EMILIN1Q9Y6C2 1016 aa22.06■■□□□ 1.12
SPC24-206ENST00000592540 RIMS2Q9UQ26 1411 aa22.06■■□□□ 1.12
SPC24-206ENST00000592540 LRSAM1Q6UWE0 723 aa22.05■■□□□ 1.12
SPC24-206ENST00000592540 RPAP2Q8IXW5 612 aaPredicted RBP22.05■■□□□ 1.12
SPC24-206ENST00000592540 ATP7BP35670 1465 aa22.04■■□□□ 1.12
SPC24-206ENST00000592540 REC8O95072 547 aa22.03■■□□□ 1.12
SPC24-206ENST00000592540 RBM10P98175 930 aaKnown RBP22.03■■□□□ 1.12
SPC24-206ENST00000592540 XPCQ01831 940 aaPredicted RBP22.03■■□□□ 1.12
SPC24-206ENST00000592540 TMEM63CQ9P1W3 806 aa22.03■■□□□ 1.12
SPC24-206ENST00000592540 ZKSCAN5Q9Y2L8 839 aa22.03■■□□□ 1.12
SPC24-206ENST00000592540 FAM83GA6ND36 823 aa22.03■■□□□ 1.12
SPC24-206ENST00000592540 SMARCA5O60264 1052 aaPredicted RBP22.03■■□□□ 1.12
SPC24-206ENST00000592540 CEP85Q6P2H3 762 aa22.03■■□□□ 1.12
SPC24-206ENST00000592540 CDK12Q9NYV4 1490 aaPredicted RBP22.03■■□□□ 1.12
SPC24-206ENST00000592540 ALKQ9UM73 1620 aa22.03■■□□□ 1.12
SPC24-206ENST00000592540 RGS12O14924 1447 aa22.01■■□□□ 1.11
SPC24-206ENST00000592540 PREX1Q8TCU6 1659 aa22.01■■□□□ 1.11
SPC24-206ENST00000592540 SYCE3A1L190 88 aa22.01■■□□□ 1.11
SPC24-206ENST00000592540 MCM5P33992 734 aa22.01■■□□□ 1.11
SPC24-206ENST00000592540 CHAMP1Q96JM3 812 aa22.01■■□□□ 1.11
SPC24-206ENST00000592540 NSFL1CQ9UNZ2 370 aaKnown RBP22.01■■□□□ 1.11
SPC24-206ENST00000592540 ERC2O15083 957 aa22■■□□□ 1.11
SPC24-206ENST00000592540 CPSF1Q10570 1443 aaKnown RBP22■■□□□ 1.11
SPC24-206ENST00000592540 DCTN1Q14203 1278 aa22■■□□□ 1.11
SPC24-206ENST00000592540 APBB1O00213 710 aa22■■□□□ 1.11
SPC24-206ENST00000592540 DIP2CQ9Y2E4 1556 aa21.99■■□□□ 1.11
SPC24-206ENST00000592540 RTL1A6NKG5 1358 aa21.99■■□□□ 1.11
SPC24-206ENST00000592540 CSPP1Q1MSJ5 1256 aa21.98■■□□□ 1.11
SPC24-206ENST00000592540 MAP7D2Q96T17 732 aa21.98■■□□□ 1.11
SPC24-206ENST00000592540 FAM13BQ9NYF5 915 aa21.98■■□□□ 1.11
SPC24-206ENST00000592540 CCDC39Q9UFE4 941 aa21.98■■□□□ 1.11
SPC24-206ENST00000592540 MSH6P52701 1360 aa21.98■■□□□ 1.11
SPC24-206ENST00000592540 UQCRHLA0A096LP55 91 aa21.97■■□□□ 1.11
SPC24-206ENST00000592540 MBD3O95983 291 aa21.97■■□□□ 1.11
SPC24-206ENST00000592540 UQCRHP07919 91 aa21.97■■□□□ 1.11
SPC24-206ENST00000592540 RAPGEF3O95398 923 aa21.96■■□□□ 1.11
SPC24-206ENST00000592540 FOXD4L5Q5VV16 416 aaPredicted RBP21.96■■□□□ 1.11
SPC24-206ENST00000592540 NME9Q86XW9 330 aa21.96■■□□□ 1.11
SPC24-206ENST00000592540 FOXD4L4Q8WXT5 416 aaPredicted RBP21.96■■□□□ 1.11
SPC24-206ENST00000592540 AATKQ6ZMQ8 1374 aa21.96■■□□□ 1.11
SPC24-206ENST00000592540 EDC4Q6P2E9 1401 aaKnown RBP21.95■■□□□ 1.1
SPC24-206ENST00000592540 TMX3Q96JJ7 454 aa21.95■■□□□ 1.1
SPC24-206ENST00000592540 MEIS3Q99687 375 aa21.95■■□□□ 1.1
SPC24-206ENST00000592540 KRT24Q2M2I5 525 aa21.95■■□□□ 1.1
SPC24-206ENST00000592540 ZRANB1Q9UGI0 708 aa21.95■■□□□ 1.1
SPC24-206ENST00000592540 NEK4P51957 841 aa21.94■■□□□ 1.1
SPC24-206ENST00000592540 HAP1P54257 671 aaPredicted RBP21.94■■□□□ 1.1
SPC24-206ENST00000592540 WAPLQ7Z5K2 1190 aa21.93■■□□□ 1.1
SPC24-206ENST00000592540 OSBPL3Q9H4L5 887 aa21.93■■□□□ 1.1
SPC24-206ENST00000592540 PTPRCP08575 1304 aa21.93■■□□□ 1.1
SPC24-206ENST00000592540 BRD1O95696 1058 aa21.92■■□□□ 1.1
SPC24-206ENST00000592540 NPM1P06748 294 aaKnown RBP eCLIP21.92■■□□□ 1.1
SPC24-206ENST00000592540 RNF214Q8ND24 703 aa21.92■■□□□ 1.1
SPC24-206ENST00000592540 DLC1Q96QB1 1528 aa21.92■■□□□ 1.1
SPC24-206ENST00000592540 MCM2P49736 904 aa21.91■■□□□ 1.1
SPC24-206ENST00000592540 PDE1AP54750 535 aa21.91■■□□□ 1.1
SPC24-206ENST00000592540 RRS1Q15050 365 aaKnown RBP21.91■■□□□ 1.1
SPC24-206ENST00000592540 DYNC1I1O14576 645 aa21.91■■□□□ 1.1
SPC24-206ENST00000592540 TUBGCP6Q96RT7 1819 aa21.91■■□□□ 1.1
SPC24-206ENST00000592540 HMMRO75330 724 aa21.9■■□□□ 1.1
SPC24-206ENST00000592540 CHL1O00533 1208 aa21.9■■□□□ 1.1
SPC24-206ENST00000592540 CUL4AQ13619 759 aa21.9■■□□□ 1.1
SPC24-206ENST00000592540 SASS6Q6UVJ0 657 aa21.9■■□□□ 1.1
SPC24-206ENST00000592540 TSPY26PQ9H489 355 aa21.89■■□□□ 1.1
SPC24-206ENST00000592540 KIAA0232Q92628 1395 aa21.89■■□□□ 1.09
SPC24-206ENST00000592540 COG3Q96JB2 828 aa21.88■■□□□ 1.09
SPC24-206ENST00000592540 NEO1Q92859 1461 aa21.87■■□□□ 1.09
SPC24-206ENST00000592540 MTERF4Q7Z6M4 381 aaKnown RBP21.86■■□□□ 1.09
SPC24-206ENST00000592540 SYAP1Q96A49 352 aaPredicted RBP21.86■■□□□ 1.09
SPC24-206ENST00000592540 INTS4Q96HW7 963 aaKnown RBP21.86■■□□□ 1.09
SPC24-206ENST00000592540 ESYT1Q9BSJ8 1104 aa21.86■■□□□ 1.09
SPC24-206ENST00000592540 RIMBP3CA6NJZ7 1639 aa21.86■■□□□ 1.09
SPC24-206ENST00000592540 RIMBP3BA6NNM3 1639 aa21.86■■□□□ 1.09
SPC24-206ENST00000592540 RIMBP3Q9UFD9 1639 aa21.86■■□□□ 1.09
SPC24-206ENST00000592540 MON2Q7Z3U7 1717 aa21.86■■□□□ 1.09
SPC24-206ENST00000592540 CPS1P31327 1500 aa21.86■■□□□ 1.09
SPC24-206ENST00000592540 TCHHQ07283 1943 aa21.85■■□□□ 1.09
SPC24-206ENST00000592540 AEBP1Q8IUX7 1158 aa21.85■■□□□ 1.09
SPC24-206ENST00000592540 PTMAP06454 111 aaKnown RBP21.85■■□□□ 1.09
SPC24-206ENST00000592540 FBXO31Q5XUX0 539 aaPredicted RBP21.85■■□□□ 1.09
SPC24-206ENST00000592540 PALD1Q9ULE6 856 aa21.85■■□□□ 1.09
SPC24-206ENST00000592540 NRKQ7Z2Y5 1582 aa21.85■■□□□ 1.09
SPC24-206ENST00000592540 SETD1AO15047 1707 aaKnown RBP21.84■■□□□ 1.09
SPC24-206ENST00000592540 RICTORQ6R327 1708 aa21.84■■□□□ 1.09
SPC24-206ENST00000592540 SLC4A2P04920 1241 aa21.84■■□□□ 1.09
SPC24-206ENST00000592540 MCCP23508 829 aa21.84■■□□□ 1.09
SPC24-206ENST00000592540 MCM10Q7L590 875 aa21.84■■□□□ 1.09
SPC24-206ENST00000592540 KIAA2012Q0VF49 1180 aa21.84■■□□□ 1.09
SPC24-206ENST00000592540 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.84■■□□□ 1.09
SPC24-206ENST00000592540 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.84■■□□□ 1.09
SPC24-206ENST00000592540 ANAPC15P60006 121 aa21.83■■□□□ 1.09
SPC24-206ENST00000592540 WASLO00401 505 aaPredicted RBP21.83■■□□□ 1.08
SPC24-206ENST00000592540 TSHZ3Q63HK5 1081 aa21.83■■□□□ 1.08
SPC24-206ENST00000592540 SULT6B1Q6IMI4 303 aa21.83■■□□□ 1.08
SPC24-206ENST00000592540 STAG3Q9UJ98 1225 aa21.83■■□□□ 1.08
SPC24-206ENST00000592540 SALL3Q9BXA9 1300 aa21.83■■□□□ 1.08
SPC24-206ENST00000592540 NOL8Q76FK4 1167 aaKnown RBP21.82■■□□□ 1.08
SPC24-206ENST00000592540 C3P01024 1663 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms