RNA–Protein interactions for RNA: ENST00000592176.1

APOC1-207, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-207ENST00000592176 BTAF1O14981 1849 aa12.91□□□□□ -0.34
APOC1-207ENST00000592176 SLC24A1O60721 1099 aa12.91□□□□□ -0.34
APOC1-207ENST00000592176 COL23A1Q86Y22 540 aaPredicted RBP12.91□□□□□ -0.34
APOC1-207ENST00000592176 HMGB2P26583 209 aaKnown RBP12.9□□□□□ -0.34
APOC1-207ENST00000592176 NBPF6Q5VWK0 638 aa12.9□□□□□ -0.34
APOC1-207ENST00000592176 NBPF4Q96M43 638 aa12.9□□□□□ -0.34
APOC1-207ENST00000592176 USP47Q96K76 1375 aa12.9□□□□□ -0.34
APOC1-207ENST00000592176 MON2Q7Z3U7 1717 aa12.9□□□□□ -0.34
APOC1-207ENST00000592176 UTRNP46939 3433 aa12.89□□□□□ -0.35
APOC1-207ENST00000592176 ST20-MTHFSA0A0A6YYL1 179 aa12.89□□□□□ -0.35
APOC1-207ENST00000592176 YBX3P16989 372 aaKnown RBP eCLIP12.89□□□□□ -0.35
APOC1-207ENST00000592176 RAPGEF4Q8WZA2 1011 aa12.89□□□□□ -0.35
APOC1-207ENST00000592176 KAT6BQ8WYB5 2073 aa12.89□□□□□ -0.35
APOC1-207ENST00000592176 TATP17735 454 aaPredicted RBP12.88□□□□□ -0.35
APOC1-207ENST00000592176 MSL1Q68DK7 614 aa12.88□□□□□ -0.35
APOC1-207ENST00000592176 FLAD1Q8NFF5 587 aa12.88□□□□□ -0.35
APOC1-207ENST00000592176 NSD2O96028 1365 aa12.88□□□□□ -0.35
APOC1-207ENST00000592176 CHD4Q14839 1912 aa12.88□□□□□ -0.35
APOC1-207ENST00000592176 CGNL1Q0VF96 1302 aa12.88□□□□□ -0.35
APOC1-207ENST00000592176 RRS1Q15050 365 aaKnown RBP12.87□□□□□ -0.35
APOC1-207ENST00000592176 USHBP1Q8N6Y0 703 aa12.87□□□□□ -0.35
APOC1-207ENST00000592176 TESK2Q96S53 571 aa12.87□□□□□ -0.35
APOC1-207ENST00000592176 USP54Q70EL1 1684 aa12.86□□□□□ -0.35
APOC1-207ENST00000592176 FYB1O15117 783 aa12.86□□□□□ -0.35
APOC1-207ENST00000592176 CD2APQ9Y5K6 639 aa12.86□□□□□ -0.35
APOC1-207ENST00000592176 LTN1O94822 1766 aa12.86□□□□□ -0.35
APOC1-207ENST00000592176 TONSLQ96HA7 1378 aa12.85□□□□□ -0.35
APOC1-207ENST00000592176 MPRIPQ6WCQ1 1025 aa12.85□□□□□ -0.35
APOC1-207ENST00000592176 GGNBP2Q9H3C7 697 aa12.85□□□□□ -0.35
APOC1-207ENST00000592176 IFFO2Q5TF58 517 aa12.84□□□□□ -0.35
APOC1-207ENST00000592176 MEGF6O75095 1541 aa12.83□□□□□ -0.35
APOC1-207ENST00000592176 HSP90AB2PQ58FF8 381 aa12.83□□□□□ -0.36
APOC1-207ENST00000592176 SMARCC1Q92922 1105 aaPredicted RBP12.83□□□□□ -0.36
APOC1-207ENST00000592176 GPBP1L1Q9HC44 474 aaPredicted RBP12.83□□□□□ -0.36
APOC1-207ENST00000592176 AK7Q96M32 723 aa12.82□□□□□ -0.36
APOC1-207ENST00000592176 PCDH11XQ9BZA7 1347 aa12.82□□□□□ -0.36
APOC1-207ENST00000592176 PCDH11YQ9BZA8 1340 aa12.82□□□□□ -0.36
APOC1-207ENST00000592176 RTL1A6NKG5 1358 aa12.81□□□□□ -0.36
APOC1-207ENST00000592176 SMG6Q86US8 1419 aaKnown RBP12.81□□□□□ -0.36
APOC1-207ENST00000592176 CYP27B1O15528 508 aa12.81□□□□□ -0.36
APOC1-207ENST00000592176 TMF1P82094 1093 aa12.81□□□□□ -0.36
APOC1-207ENST00000592176 QSER1Q2KHR3 1735 aa12.81□□□□□ -0.36
APOC1-207ENST00000592176 PALLDQ8WX93 1383 aa12.81□□□□□ -0.36
APOC1-207ENST00000592176 INSRP06213 1382 aa12.8□□□□□ -0.36
APOC1-207ENST00000592176 ATP10DQ9P241 1426 aa12.79□□□□□ -0.36
APOC1-207ENST00000592176 COL24A1Q17RW2 1714 aa12.79□□□□□ -0.36
APOC1-207ENST00000592176 SMIM5Q71RC9 77 aa12.79□□□□□ -0.36
APOC1-207ENST00000592176 ZNF526Q8TF50 670 aaPredicted RBP12.79□□□□□ -0.36
APOC1-207ENST00000592176 PIGBQ92521 554 aa12.79□□□□□ -0.36
APOC1-207ENST00000592176 FAM208AQ9UK61 1670 aaKnown RBP12.79□□□□□ -0.36
APOC1-207ENST00000592176 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.78□□□□□ -0.36
APOC1-207ENST00000592176 PHF14O94880 888 aa12.78□□□□□ -0.36
APOC1-207ENST00000592176 SPG7Q9UQ90 795 aa12.78□□□□□ -0.36
APOC1-207ENST00000592176 LY75O60449 1722 aa12.78□□□□□ -0.36
APOC1-207ENST00000592176 DOT1LQ8TEK3 1739 aa12.77□□□□□ -0.36
APOC1-207ENST00000592176 NKX1-1Q15270 411 aaPredicted RBP12.77□□□□□ -0.37
APOC1-207ENST00000592176 CDCA8Q53HL2 280 aa12.77□□□□□ -0.37
APOC1-207ENST00000592176 AMIGO3Q86WK7 504 aa12.77□□□□□ -0.37
APOC1-207ENST00000592176 WWC3Q9ULE0 1092 aa12.77□□□□□ -0.37
APOC1-207ENST00000592176 SHANK3Q9BYB0 1731 aa12.76□□□□□ -0.37
APOC1-207ENST00000592176 LOC102724428A0A0B4J2F2 783 aa12.76□□□□□ -0.37
APOC1-207ENST00000592176 PPM1GO15355 546 aaPredicted RBP12.76□□□□□ -0.37
APOC1-207ENST00000592176 HSPA6P17066 643 aa12.76□□□□□ -0.37
APOC1-207ENST00000592176 SSFA2P28290 1259 aa12.76□□□□□ -0.37
APOC1-207ENST00000592176 SIK1P57059 783 aa12.76□□□□□ -0.37
APOC1-207ENST00000592176 IGSF1Q8N6C5 1336 aa12.76□□□□□ -0.37
APOC1-207ENST00000592176 FLT4P35916 1363 aa12.76□□□□□ -0.37
APOC1-207ENST00000592176 KIF24Q5T7B8 1368 aa12.76□□□□□ -0.37
APOC1-207ENST00000592176 TUBGCP6Q96RT7 1819 aa12.75□□□□□ -0.37
APOC1-207ENST00000592176 TMOD3Q9NYL9 352 aa12.75□□□□□ -0.37
APOC1-207ENST00000592176 EMILIN1Q9Y6C2 1016 aa12.75□□□□□ -0.37
APOC1-207ENST00000592176 ATP6V1AP38606 617 aa12.74□□□□□ -0.37
APOC1-207ENST00000592176 LINC00116Q8NCU8 138 aa12.74□□□□□ -0.37
APOC1-207ENST00000592176 CARD14Q9BXL6 1004 aa12.74□□□□□ -0.37
APOC1-207ENST00000592176 RGPD2P0DJD1 1756 aa12.74□□□□□ -0.37
APOC1-207ENST00000592176 NSD3Q9BZ95 1437 aa12.73□□□□□ -0.37
APOC1-207ENST00000592176 GOLGB1Q14789 3259 aaKnown RBP12.73□□□□□ -0.37
APOC1-207ENST00000592176 GNPATO15228 680 aa12.73□□□□□ -0.37
APOC1-207ENST00000592176 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.73□□□□□ -0.37
APOC1-207ENST00000592176 ASAP1Q9ULH1 1129 aa12.73□□□□□ -0.37
APOC1-207ENST00000592176 ADCY9O60503 1353 aa12.72□□□□□ -0.37
APOC1-207ENST00000592176 WASHC2AQ641Q2 1341 aa12.72□□□□□ -0.37
APOC1-207ENST00000592176 ITPK1Q13572 414 aa12.72□□□□□ -0.37
APOC1-207ENST00000592176 IFNL2Q8IZJ0 200 aa12.72□□□□□ -0.37
APOC1-207ENST00000592176 EYA1Q99502 592 aa12.72□□□□□ -0.37
APOC1-207ENST00000592176 TRAPPC3LQ5T215 181 aa12.71□□□□□ -0.37
APOC1-207ENST00000592176 NLGN1Q8N2Q7 840 aa12.71□□□□□ -0.37
APOC1-207ENST00000592176 KIF3CO14782 793 aa12.7□□□□□ -0.38
APOC1-207ENST00000592176 MMP10P09238 476 aa12.7□□□□□ -0.38
APOC1-207ENST00000592176 PHKG2P15735 406 aa12.7□□□□□ -0.38
APOC1-207ENST00000592176 TGFB2P61812 414 aa12.7□□□□□ -0.38
APOC1-207ENST00000592176 ATG3Q9NT62 314 aa12.7□□□□□ -0.38
APOC1-207ENST00000592176 RTCBQ9Y3I0 505 aaKnown RBP12.7□□□□□ -0.38
APOC1-207ENST00000592176 C5P01031 1676 aa12.7□□□□□ -0.38
APOC1-207ENST00000592176 A0A0G2JLW4 131 aa12.69□□□□□ -0.38
APOC1-207ENST00000592176 ARHGAP27Q6ZUM4 889 aa12.69□□□□□ -0.38
APOC1-207ENST00000592176 BCS1LQ9Y276 419 aa12.69□□□□□ -0.38
APOC1-207ENST00000592176 CEP350Q5VT06 3117 aa12.69□□□□□ -0.38
APOC1-207ENST00000592176 C4BP0C0L5 1744 aa12.68□□□□□ -0.38
APOC1-207ENST00000592176 RBM42Q9BTD8 480 aaKnown RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms