RNA–Protein interactions for RNA: ENST00000591974.5

LINC01539-205, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 2 BASIC

Gene LINC01539, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-205ENST00000591974 RARSP54136 660 aaKnown RBP13.64□□□□□ -0.23
LINC01539-205ENST00000591974 HAP1P54257 671 aaPredicted RBP13.64□□□□□ -0.23
LINC01539-205ENST00000591974 EXOSC9Q06265 439 aaKnown RBP13.64□□□□□ -0.23
LINC01539-205ENST00000591974 DCTN1Q14203 1278 aa13.64□□□□□ -0.23
LINC01539-205ENST00000591974 CHRNA2Q15822 529 aa13.64□□□□□ -0.23
LINC01539-205ENST00000591974 PRDM11Q9NQV5 511 aa13.64□□□□□ -0.23
LINC01539-205ENST00000591974 CRB1P82279 1406 aa13.63□□□□□ -0.23
LINC01539-205ENST00000591974 GNAT3A8MTJ3 354 aa13.63□□□□□ -0.23
LINC01539-205ENST00000591974 LAS1LQ9Y4W2 734 aaKnown RBP13.63□□□□□ -0.23
LINC01539-205ENST00000591974 PLIN1O60240 522 aa13.63□□□□□ -0.23
LINC01539-205ENST00000591974 AMOTQ4VCS5 1084 aa13.63□□□□□ -0.23
LINC01539-205ENST00000591974 MCM10Q7L590 875 aa13.63□□□□□ -0.23
LINC01539-205ENST00000591974 MBIPQ9NS73 344 aa13.63□□□□□ -0.23
LINC01539-205ENST00000591974 BCAR3O75815 825 aa13.62□□□□□ -0.23
LINC01539-205ENST00000591974 PLEKHO1Q53GL0 409 aaPredicted RBP13.62□□□□□ -0.23
LINC01539-205ENST00000591974 ZNF428Q96B54 188 aa13.62□□□□□ -0.23
LINC01539-205ENST00000591974 COL5A2P05997 1499 aaPredicted RBP13.62□□□□□ -0.23
LINC01539-205ENST00000591974 COL14A1Q05707 1796 aaKnown RBP13.62□□□□□ -0.23
LINC01539-205ENST00000591974 PKD1L3Q7Z443 1732 aa13.62□□□□□ -0.23
LINC01539-205ENST00000591974 PARP4Q9UKK3 1724 aaKnown RBP13.61□□□□□ -0.23
LINC01539-205ENST00000591974 CHL1O00533 1208 aa13.61□□□□□ -0.23
LINC01539-205ENST00000591974 CSB-PGBD3P0DP91 1061 aa13.61□□□□□ -0.23
LINC01539-205ENST00000591974 NLRP2Q9NX02 1062 aa13.61□□□□□ -0.23
LINC01539-205ENST00000591974 ADAMTS7Q9UKP4 1686 aa13.6□□□□□ -0.23
LINC01539-205ENST00000591974 OVOS2A0A0G2JMS6 1433 aa13.6□□□□□ -0.23
LINC01539-205ENST00000591974 WDR17Q8IZU2 1322 aa13.6□□□□□ -0.23
LINC01539-205ENST00000591974 CEMIPQ8WUJ3 1361 aa13.59□□□□□ -0.23
LINC01539-205ENST00000591974 AKAP4Q5JQC9 854 aa13.59□□□□□ -0.23
LINC01539-205ENST00000591974 ALDH1L2Q3SY69 923 aa13.59□□□□□ -0.23
LINC01539-205ENST00000591974 ZNF530Q6P9A1 599 aaPredicted RBP13.59□□□□□ -0.23
LINC01539-205ENST00000591974 RAPGEF4Q8WZA2 1011 aa13.59□□□□□ -0.23
LINC01539-205ENST00000591974 SCN11AQ9UI33 1791 aa13.58□□□□□ -0.23
LINC01539-205ENST00000591974 MEGF6O75095 1541 aa13.58□□□□□ -0.24
LINC01539-205ENST00000591974 PDE3AQ14432 1141 aa13.58□□□□□ -0.24
LINC01539-205ENST00000591974 BABAM1Q9NWV8 329 aa13.58□□□□□ -0.24
LINC01539-205ENST00000591974 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.58□□□□□ -0.24
LINC01539-205ENST00000591974 CACNA1FO60840 1977 aa13.58□□□□□ -0.24
LINC01539-205ENST00000591974 SIPA1L3O60292 1781 aaPredicted RBP13.57□□□□□ -0.24
LINC01539-205ENST00000591974 KDM3BQ7LBC6 1761 aa13.57□□□□□ -0.24
LINC01539-205ENST00000591974 TATP17735 454 aaPredicted RBP13.57□□□□□ -0.24
LINC01539-205ENST00000591974 C1orf141Q5JVX7 400 aa13.57□□□□□ -0.24
LINC01539-205ENST00000591974 C20orf194Q5TEA3 1177 aa13.57□□□□□ -0.24
LINC01539-205ENST00000591974 IL17REQ8NFR9 667 aa13.57□□□□□ -0.24
LINC01539-205ENST00000591974 EXOC6Q8TAG9 804 aa13.57□□□□□ -0.24
LINC01539-205ENST00000591974 VAMP4O75379 141 aa13.57□□□□□ -0.24
LINC01539-205ENST00000591974 CANXP27824 592 aaKnown RBP13.57□□□□□ -0.24
LINC01539-205ENST00000591974 BRPF1P55201 1214 aaPredicted RBP13.57□□□□□ -0.24
LINC01539-205ENST00000591974 SSH1Q8WYL5 1049 aa13.57□□□□□ -0.24
LINC01539-205ENST00000591974 SMC4Q9NTJ3 1288 aa13.57□□□□□ -0.24
LINC01539-205ENST00000591974 TWISTNBQ3B726 338 aaPredicted RBP13.56□□□□□ -0.24
LINC01539-205ENST00000591974 CRBNQ96SW2 442 aa13.56□□□□□ -0.24
LINC01539-205ENST00000591974 BCL2L13Q9BXK5 485 aa13.56□□□□□ -0.24
LINC01539-205ENST00000591974 TSPYL4Q9UJ04 414 aa13.56□□□□□ -0.24
LINC01539-205ENST00000591974 KIF16BQ96L93 1317 aa13.56□□□□□ -0.24
LINC01539-205ENST00000591974 UBAP1LF5GYI3 381 aa13.55□□□□□ -0.24
LINC01539-205ENST00000591974 PIP4K2BP78356 416 aa13.55□□□□□ -0.24
LINC01539-205ENST00000591974 TSPYL6Q8N831 410 aa13.55□□□□□ -0.24
LINC01539-205ENST00000591974 PLCH1Q4KWH8 1693 aa13.55□□□□□ -0.24
LINC01539-205ENST00000591974 TAF7Q15545 349 aaPredicted RBP13.55□□□□□ -0.24
LINC01539-205ENST00000591974 TOM1L2Q6ZVM7 507 aa13.55□□□□□ -0.24
LINC01539-205ENST00000591974 C8orf58Q8NAV2 365 aa13.55□□□□□ -0.24
LINC01539-205ENST00000591974 FRAT1Q92837 279 aaPredicted RBP13.55□□□□□ -0.24
LINC01539-205ENST00000591974 CARD10Q9BWT7 1032 aa13.55□□□□□ -0.24
LINC01539-205ENST00000591974 SPG7Q9UQ90 795 aa13.55□□□□□ -0.24
LINC01539-205ENST00000591974 MS4A1P11836 297 aa13.53□□□□□ -0.24
LINC01539-205ENST00000591974 ZKSCAN2Q63HK3 967 aa13.53□□□□□ -0.24
LINC01539-205ENST00000591974 B4GALNT3Q6L9W6 998 aa13.53□□□□□ -0.24
LINC01539-205ENST00000591974 CCDC136Q96JN2 1154 aa13.53□□□□□ -0.24
LINC01539-205ENST00000591974 RNMTO43148 476 aaKnown RBP13.53□□□□□ -0.24
LINC01539-205ENST00000591974 EVA1CP58658 441 aa13.53□□□□□ -0.24
LINC01539-205ENST00000591974 SOS1Q07889 1333 aaPredicted RBP13.53□□□□□ -0.24
LINC01539-205ENST00000591974 PELP1Q8IZL8 1130 aaKnown RBP13.53□□□□□ -0.24
LINC01539-205ENST00000591974 SHANK3Q9BYB0 1731 aa13.53□□□□□ -0.24
LINC01539-205ENST00000591974 NWD2Q9ULI1 1742 aa13.53□□□□□ -0.24
LINC01539-205ENST00000591974 WNK3Q9BYP7 1800 aa13.52□□□□□ -0.25
LINC01539-205ENST00000591974 NRAPQ86VF7 1730 aa13.52□□□□□ -0.25
LINC01539-205ENST00000591974 IPO8O15397 1037 aaKnown RBP13.52□□□□□ -0.25
LINC01539-205ENST00000591974 LGR6Q9HBX8 967 aa13.52□□□□□ -0.25
LINC01539-205ENST00000591974 ELL2O00472 640 aaPredicted RBP13.51□□□□□ -0.25
LINC01539-205ENST00000591974 TEFQ10587 303 aa13.51□□□□□ -0.25
LINC01539-205ENST00000591974 LARP1Q6PKG0 1096 aaKnown RBP13.51□□□□□ -0.25
LINC01539-205ENST00000591974 CERKQ8TCT0 537 aa13.51□□□□□ -0.25
LINC01539-205ENST00000591974 STRN4Q9NRL3 753 aa13.51□□□□□ -0.25
LINC01539-205ENST00000591974 BTG4Q9NY30 223 aa13.51□□□□□ -0.25
LINC01539-205ENST00000591974 MIS18AQ9NYP9 233 aa13.51□□□□□ -0.25
LINC01539-205ENST00000591974 PHKG2P15735 406 aa13.5□□□□□ -0.25
LINC01539-205ENST00000591974 ATF7IPQ6VMQ6 1270 aa13.5□□□□□ -0.25
LINC01539-205ENST00000591974 MPRIPQ6WCQ1 1025 aa13.5□□□□□ -0.25
LINC01539-205ENST00000591974 IFNL2Q8IZJ0 200 aa13.5□□□□□ -0.25
LINC01539-205ENST00000591974 MRC1P22897 1456 aa13.5□□□□□ -0.25
LINC01539-205ENST00000591974 AAMPQ13685 434 aa13.5□□□□□ -0.25
LINC01539-205ENST00000591974 MRPL50Q8N5N7 158 aaKnown RBP13.5□□□□□ -0.25
LINC01539-205ENST00000591974 ARHGAP45Q92619 1136 aa13.5□□□□□ -0.25
LINC01539-205ENST00000591974 NOB1Q9ULX3 412 aaKnown RBP13.5□□□□□ -0.25
LINC01539-205ENST00000591974 KDM6AO15550 1401 aaPredicted RBP13.49□□□□□ -0.25
LINC01539-205ENST00000591974 HSP90AB1P08238 724 aaKnown RBP13.49□□□□□ -0.25
LINC01539-205ENST00000591974 TRIM27P14373 513 aa13.49□□□□□ -0.25
LINC01539-205ENST00000591974 IL2RBP14784 551 aa13.49□□□□□ -0.25
LINC01539-205ENST00000591974 KRT24Q2M2I5 525 aa13.49□□□□□ -0.25
LINC01539-205ENST00000591974 FTSJ3Q8IY81 847 aaKnown RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms