RNA–Protein interactions for RNA: ENST00000591600.1

APOC4-201, Transcript of apolipoprotein C4, humanhuman

TSL 3 BASIC

Gene APOC4, Length 348 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4-201ENST00000591600 GGNBP2Q9H3C7 697 aa21.46■■□□□ 1.03
APOC4-201ENST00000591600 KIF24Q5T7B8 1368 aa21.46■■□□□ 1.03
APOC4-201ENST00000591600 COL24A1Q17RW2 1714 aa21.46■■□□□ 1.03
APOC4-201ENST00000591600 MEGF6O75095 1541 aa21.45■■□□□ 1.02
APOC4-201ENST00000591600 RRS1Q15050 365 aaKnown RBP21.44■■□□□ 1.02
APOC4-201ENST00000591600 PRIM1P49642 420 aaKnown RBP21.43■■□□□ 1.02
APOC4-201ENST00000591600 ZNF827Q17R98 1081 aa21.43■■□□□ 1.02
APOC4-201ENST00000591600 NBPF6Q5VWK0 638 aa21.43■■□□□ 1.02
APOC4-201ENST00000591600 AKT1S1Q96B36 256 aa21.43■■□□□ 1.02
APOC4-201ENST00000591600 NBPF4Q96M43 638 aa21.43■■□□□ 1.02
APOC4-201ENST00000591600 INSRP06213 1382 aa21.43■■□□□ 1.02
APOC4-201ENST00000591600 SMG6Q86US8 1419 aaKnown RBP21.43■■□□□ 1.02
APOC4-201ENST00000591600 TUBGCP6Q96RT7 1819 aa21.42■■□□□ 1.02
APOC4-201ENST00000591600 SYT17Q9BSW7 474 aa21.42■■□□□ 1.02
APOC4-201ENST00000591600 NSD2O96028 1365 aa21.41■■□□□ 1.02
APOC4-201ENST00000591600 SLC16A10Q8TF71 515 aa21.41■■□□□ 1.02
APOC4-201ENST00000591600 FHDC1Q9C0D6 1143 aaPredicted RBP21.41■■□□□ 1.02
APOC4-201ENST00000591600 FLT4P35916 1363 aa21.4■■□□□ 1.02
APOC4-201ENST00000591600 MAP3K5Q99683 1374 aa21.4■■□□□ 1.02
APOC4-201ENST00000591600 CLSPNQ9HAW4 1339 aa21.4■■□□□ 1.02
APOC4-201ENST00000591600 CHD4Q14839 1912 aa21.39■■□□□ 1.02
APOC4-201ENST00000591600 ANKRD26Q9UPS8 1709 aa21.39■■□□□ 1.01
APOC4-201ENST00000591600 SYTL4Q96C24 671 aaPredicted RBP21.39■■□□□ 1.01
APOC4-201ENST00000591600 ARXQ96QS3 562 aa21.39■■□□□ 1.01
APOC4-201ENST00000591600 CARD14Q9BXL6 1004 aa21.39■■□□□ 1.01
APOC4-201ENST00000591600 HSP90AB2PQ58FF8 381 aa21.38■■□□□ 1.01
APOC4-201ENST00000591600 RAPGEF4Q8WZA2 1011 aa21.38■■□□□ 1.01
APOC4-201ENST00000591600 MAP2P11137 1827 aaKnown RBP21.38■■□□□ 1.01
APOC4-201ENST00000591600 PNPLA7Q6ZV29 1317 aa21.35■■□□□ 1.01
APOC4-201ENST00000591600 TATP17735 454 aaPredicted RBP21.35■■□□□ 1.01
APOC4-201ENST00000591600 USHBP1Q8N6Y0 703 aa21.35■■□□□ 1.01
APOC4-201ENST00000591600 PKD1L3Q7Z443 1732 aa21.35■■□□□ 1.01
APOC4-201ENST00000591600 ITGB4P16144 1822 aa21.34■■□□□ 1.01
APOC4-201ENST00000591600 TFCP2L1Q9NZI6 479 aa21.34■■□□□ 1.01
APOC4-201ENST00000591600 NSD3Q9BZ95 1437 aa21.34■■□□□ 1.01
APOC4-201ENST00000591600 TAF1LQ8IZX4 1826 aa21.34■■□□□ 1.01
APOC4-201ENST00000591600 UTRNP46939 3433 aa21.33■■□□□ 1.01
APOC4-201ENST00000591600 PCDH11XQ9BZA7 1347 aa21.33■■□□□ 1.01
APOC4-201ENST00000591600 PCDH11YQ9BZA8 1340 aa21.33■■□□□ 1.01
APOC4-201ENST00000591600 NCAPD2Q15021 1401 aa21.33■■□□□ 1.01
APOC4-201ENST00000591600 C5P01031 1676 aa21.32■■□□□ 1
APOC4-201ENST00000591600 HMGB2P26583 209 aaKnown RBP21.32■■□□□ 1
APOC4-201ENST00000591600 CCNL1Q9UK58 526 aaPredicted RBP21.32■■□□□ 1
APOC4-201ENST00000591600 KCNQ4P56696 695 aa21.31■■□□□ 1
APOC4-201ENST00000591600 EMILIN1Q9Y6C2 1016 aa21.3■■□□□ 1
APOC4-201ENST00000591600 TOGARAM1Q9Y4F4 1720 aa21.29■■□□□ 1
APOC4-201ENST00000591600 POLD1P28340 1107 aa21.29■■□□□ 1
APOC4-201ENST00000591600 WASHC2AQ641Q2 1341 aa21.29■■□□□ 1
APOC4-201ENST00000591600 CYP27B1O15528 508 aa21.27■■□□□ 1
APOC4-201ENST00000591600 NKX1-1Q15270 411 aaPredicted RBP21.25■□□□□ 0.99
APOC4-201ENST00000591600 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.24■□□□□ 0.99
APOC4-201ENST00000591600 PALLDQ8WX93 1383 aa21.23■□□□□ 0.99
APOC4-201ENST00000591600 PPM1GO15355 546 aaPredicted RBP21.23■□□□□ 0.99
APOC4-201ENST00000591600 MPRIPQ6WCQ1 1025 aa21.23■□□□□ 0.99
APOC4-201ENST00000591600 COL23A1Q86Y22 540 aaPredicted RBP21.23■□□□□ 0.99
APOC4-201ENST00000591600 POLKQ9UBT6 870 aa21.23■□□□□ 0.99
APOC4-201ENST00000591600 SPG7Q9UQ90 795 aa21.23■□□□□ 0.99
APOC4-201ENST00000591600 FLAD1Q8NFF5 587 aa21.22■□□□□ 0.99
APOC4-201ENST00000591600 SMARCC1Q92922 1105 aaPredicted RBP21.22■□□□□ 0.99
APOC4-201ENST00000591600 PCGF6Q9BYE7 350 aa21.22■□□□□ 0.99
APOC4-201ENST00000591600 PLEKHG2Q9H7P9 1386 aa21.22■□□□□ 0.99
APOC4-201ENST00000591600 C4BP0C0L5 1744 aa21.21■□□□□ 0.99
APOC4-201ENST00000591600 ZNF784Q8NCA9 323 aaPredicted RBP21.21■□□□□ 0.99
APOC4-201ENST00000591600 EYA1Q99502 592 aa21.21■□□□□ 0.99
APOC4-201ENST00000591600 UBR3Q6ZT12 1888 aa21.21■□□□□ 0.99
APOC4-201ENST00000591600 GPR162Q16538 588 aa21.19■□□□□ 0.98
APOC4-201ENST00000591600 EIF4G2P78344 907 aaKnown RBP eCLIP21.18■□□□□ 0.98
APOC4-201ENST00000591600 PIGBQ92521 554 aa21.18■□□□□ 0.98
APOC4-201ENST00000591600 MSH5O43196 834 aa21.17■□□□□ 0.98
APOC4-201ENST00000591600 KLHL34Q8N239 644 aa21.16■□□□□ 0.98
APOC4-201ENST00000591600 GOLGB1Q14789 3259 aaKnown RBP21.16■□□□□ 0.98
APOC4-201ENST00000591600 IFNL2Q8IZJ0 200 aa21.15■□□□□ 0.98
APOC4-201ENST00000591600 NLGN2Q8NFZ4 835 aa21.15■□□□□ 0.98
APOC4-201ENST00000591600 PHKG2P15735 406 aa21.14■□□□□ 0.97
APOC4-201ENST00000591600 EIF4A2Q14240 407 aaKnown RBP21.14■□□□□ 0.97
APOC4-201ENST00000591600 ZNF831Q5JPB2 1677 aa21.13■□□□□ 0.97
APOC4-201ENST00000591600 POLR3GLQ9BT43 218 aa21.13■□□□□ 0.97
APOC4-201ENST00000591600 LOC102724428A0A0B4J2F2 783 aa21.12■□□□□ 0.97
APOC4-201ENST00000591600 HSPA5P11021 654 aaKnown RBP21.12■□□□□ 0.97
APOC4-201ENST00000591600 SIK1P57059 783 aa21.12■□□□□ 0.97
APOC4-201ENST00000591600 AK7Q96M32 723 aa21.12■□□□□ 0.97
APOC4-201ENST00000591600 PANK3Q9H999 370 aa21.12■□□□□ 0.97
APOC4-201ENST00000591600 TMOD3Q9NYL9 352 aa21.12■□□□□ 0.97
APOC4-201ENST00000591600 CD2APQ9Y5K6 639 aa21.12■□□□□ 0.97
APOC4-201ENST00000591600 IGSF1Q8N6C5 1336 aa21.11■□□□□ 0.97
APOC4-201ENST00000591600 TNNT2P45379 298 aaPredicted RBP21.11■□□□□ 0.97
APOC4-201ENST00000591600 GRIN3BO60391 1043 aa21.1■□□□□ 0.97
APOC4-201ENST00000591600 MSL1Q68DK7 614 aa21.1■□□□□ 0.97
APOC4-201ENST00000591600 SSFA2P28290 1259 aa21.09■□□□□ 0.97
APOC4-201ENST00000591600 AMIGO3Q86WK7 504 aa21.08■□□□□ 0.97
APOC4-201ENST00000591600 ASAP1Q9ULH1 1129 aa21.08■□□□□ 0.97
APOC4-201ENST00000591600 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.07■□□□□ 0.96
APOC4-201ENST00000591600 ERVV-2B6SEH9 535 aa21.07■□□□□ 0.96
APOC4-201ENST00000591600 YBX3P16989 372 aaKnown RBP eCLIP21.07■□□□□ 0.96
APOC4-201ENST00000591600 PELP1Q8IZL8 1130 aaKnown RBP21.07■□□□□ 0.96
APOC4-201ENST00000591600 LINC00116Q8NCU8 138 aa21.07■□□□□ 0.96
APOC4-201ENST00000591600 ATG3Q9NT62 314 aa21.06■□□□□ 0.96
APOC4-201ENST00000591600 HSP90AB1P08238 724 aaKnown RBP21.05■□□□□ 0.96
APOC4-201ENST00000591600 ATP6V1AP38606 617 aa21.05■□□□□ 0.96
APOC4-201ENST00000591600 ITPK1Q13572 414 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms