RNA–Protein interactions for RNA: ENST00000590683.2

AP3D1-208, Transcript of adaptor related protein complex 3 subunit delta 1, humanhuman

TSL 5

Gene AP3D1, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1-208ENST00000590683 SOX12O15370 315 aa12.89□□□□□ -0.35
AP3D1-208ENST00000590683 KIAA1551Q9HCM1 1747 aa12.88□□□□□ -0.35
AP3D1-208ENST00000590683 TAF1LQ8IZX4 1826 aa12.88□□□□□ -0.35
AP3D1-208ENST00000590683 KIAA1210Q9ULL0 1709 aa12.88□□□□□ -0.35
AP3D1-208ENST00000590683 CCNL1Q9UK58 526 aaPredicted RBP12.87□□□□□ -0.35
AP3D1-208ENST00000590683 KCPQ6ZWJ8 1503 aa12.87□□□□□ -0.35
AP3D1-208ENST00000590683 TNRC6CQ9HCJ0 1690 aaKnown RBP12.86□□□□□ -0.35
AP3D1-208ENST00000590683 NSD2O96028 1365 aa12.86□□□□□ -0.35
AP3D1-208ENST00000590683 TOGARAM1Q9Y4F4 1720 aa12.86□□□□□ -0.35
AP3D1-208ENST00000590683 IL2RBP14784 551 aa12.86□□□□□ -0.35
AP3D1-208ENST00000590683 PPARGC1BQ86YN6 1023 aaKnown RBP12.86□□□□□ -0.35
AP3D1-208ENST00000590683 SYTL4Q96C24 671 aaPredicted RBP12.86□□□□□ -0.35
AP3D1-208ENST00000590683 MPHOSPH9Q99550 1183 aa12.85□□□□□ -0.35
AP3D1-208ENST00000590683 KIF13BQ9NQT8 1826 aa12.85□□□□□ -0.35
AP3D1-208ENST00000590683 NFAT5O94916 1531 aa12.84□□□□□ -0.35
AP3D1-208ENST00000590683 PRIM1P49642 420 aaKnown RBP12.84□□□□□ -0.35
AP3D1-208ENST00000590683 BRCA1P38398 1863 aaKnown RBP12.83□□□□□ -0.36
AP3D1-208ENST00000590683 ARHGAP27Q6ZUM4 889 aa12.83□□□□□ -0.36
AP3D1-208ENST00000590683 SMIM5Q71RC9 77 aa12.83□□□□□ -0.36
AP3D1-208ENST00000590683 DDX54Q8TDD1 881 aaKnown RBP12.83□□□□□ -0.36
AP3D1-208ENST00000590683 RRAGCQ9HB90 399 aa12.83□□□□□ -0.36
AP3D1-208ENST00000590683 NLRP2Q9NX02 1062 aa12.83□□□□□ -0.36
AP3D1-208ENST00000590683 LTN1O94822 1766 aa12.83□□□□□ -0.36
AP3D1-208ENST00000590683 UBR3Q6ZT12 1888 aa12.82□□□□□ -0.36
AP3D1-208ENST00000590683 SMC1BQ8NDV3 1235 aa12.82□□□□□ -0.36
AP3D1-208ENST00000590683 PXDNLA1KZ92 1463 aa12.82□□□□□ -0.36
AP3D1-208ENST00000590683 ERBB3P21860 1342 aa12.82□□□□□ -0.36
AP3D1-208ENST00000590683 ANKRD36BQ8N2N9 1353 aa12.81□□□□□ -0.36
AP3D1-208ENST00000590683 C10orf71Q711Q0 1435 aa12.81□□□□□ -0.36
AP3D1-208ENST00000590683 FOXN1O15353 648 aa12.81□□□□□ -0.36
AP3D1-208ENST00000590683 AMIGO3Q86WK7 504 aa12.81□□□□□ -0.36
AP3D1-208ENST00000590683 BCS1LQ9Y276 419 aa12.81□□□□□ -0.36
AP3D1-208ENST00000590683 KDM2AQ9Y2K7 1162 aa12.81□□□□□ -0.36
AP3D1-208ENST00000590683 SBF1O95248 1867 aa12.8□□□□□ -0.36
AP3D1-208ENST00000590683 SRPK2P78362 688 aaKnown RBP12.8□□□□□ -0.36
AP3D1-208ENST00000590683 C9orf131Q5VYM1 1079 aa12.8□□□□□ -0.36
AP3D1-208ENST00000590683 KCNH5Q8NCM2 988 aa12.8□□□□□ -0.36
AP3D1-208ENST00000590683 CABP2Q9NPB3 220 aa12.8□□□□□ -0.36
AP3D1-208ENST00000590683 ARFGEF1Q9Y6D6 1849 aa12.8□□□□□ -0.36
AP3D1-208ENST00000590683 PLEKHG2Q9H7P9 1386 aa12.8□□□□□ -0.36
AP3D1-208ENST00000590683 C4BP0C0L5 1744 aa12.79□□□□□ -0.36
AP3D1-208ENST00000590683 KDM2BQ8NHM5 1336 aa12.79□□□□□ -0.36
AP3D1-208ENST00000590683 MLLT1Q03111 559 aaPredicted RBP12.78□□□□□ -0.36
AP3D1-208ENST00000590683 FLAD1Q8NFF5 587 aa12.78□□□□□ -0.36
AP3D1-208ENST00000590683 CABP1Q9NZU7 370 aa12.78□□□□□ -0.36
AP3D1-208ENST00000590683 ABHD8Q96I13 439 aa12.77□□□□□ -0.37
AP3D1-208ENST00000590683 PRDM10Q9NQV6 1147 aa12.77□□□□□ -0.37
AP3D1-208ENST00000590683 USP47Q96K76 1375 aa12.77□□□□□ -0.37
AP3D1-208ENST00000590683 A0A0G2JLW4 131 aa12.76□□□□□ -0.37
AP3D1-208ENST00000590683 PHF14O94880 888 aa12.76□□□□□ -0.37
AP3D1-208ENST00000590683 DCAF11Q8TEB1 546 aa12.75□□□□□ -0.37
AP3D1-208ENST00000590683 ANKRD24Q8TF21 1146 aa12.75□□□□□ -0.37
AP3D1-208ENST00000590683 MKRN1Q9UHC7 482 aaKnown RBP12.75□□□□□ -0.37
AP3D1-208ENST00000590683 RGPD2P0DJD1 1756 aa12.74□□□□□ -0.37
AP3D1-208ENST00000590683 TTC21BQ7Z4L5 1316 aa12.74□□□□□ -0.37
AP3D1-208ENST00000590683 FCHSD2O94868 740 aa12.74□□□□□ -0.37
AP3D1-208ENST00000590683 RNF181Q9P0P0 153 aa12.73□□□□□ -0.37
AP3D1-208ENST00000590683 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.72□□□□□ -0.37
AP3D1-208ENST00000590683 TNRC18O15417 2968 aaPredicted RBP12.72□□□□□ -0.37
AP3D1-208ENST00000590683 AK7Q96M32 723 aa12.72□□□□□ -0.37
AP3D1-208ENST00000590683 FAM208AQ9UK61 1670 aaKnown RBP12.71□□□□□ -0.37
AP3D1-208ENST00000590683 DPEP1P16444 411 aa12.71□□□□□ -0.37
AP3D1-208ENST00000590683 CTCFP49711 727 aaPredicted RBP12.71□□□□□ -0.37
AP3D1-208ENST00000590683 RGS19P49795 217 aa12.71□□□□□ -0.37
AP3D1-208ENST00000590683 LBX1P52954 281 aa12.71□□□□□ -0.37
AP3D1-208ENST00000590683 TGFB2P61812 414 aa12.71□□□□□ -0.37
AP3D1-208ENST00000590683 VIRMAQ69YN4 1812 aaKnown RBP12.71□□□□□ -0.38
AP3D1-208ENST00000590683 CCDC88AQ3V6T2 1871 aa12.7□□□□□ -0.38
AP3D1-208ENST00000590683 CCDC85CA6NKD9 419 aa12.7□□□□□ -0.38
AP3D1-208ENST00000590683 MMP10P09238 476 aa12.7□□□□□ -0.38
AP3D1-208ENST00000590683 PALLDQ8WX93 1383 aa12.69□□□□□ -0.38
AP3D1-208ENST00000590683 ITGB4P16144 1822 aa12.69□□□□□ -0.38
AP3D1-208ENST00000590683 AIDAQ96BJ3 306 aa12.68□□□□□ -0.38
AP3D1-208ENST00000590683 TIAM2Q8IVF5 1701 aa12.68□□□□□ -0.38
AP3D1-208ENST00000590683 MAP2P11137 1827 aaKnown RBP12.67□□□□□ -0.38
AP3D1-208ENST00000590683 TTC21AQ8NDW8 1320 aa12.67□□□□□ -0.38
AP3D1-208ENST00000590683 C4AP0C0L4 1744 aa12.67□□□□□ -0.38
AP3D1-208ENST00000590683 MON2Q7Z3U7 1717 aa12.67□□□□□ -0.38
AP3D1-208ENST00000590683 MEGF6O75095 1541 aa12.67□□□□□ -0.38
AP3D1-208ENST00000590683 PDE4DIPQ5VU43 2346 aa12.66□□□□□ -0.38
AP3D1-208ENST00000590683 VEGFAP15692 232 aaPredicted RBP12.66□□□□□ -0.38
AP3D1-208ENST00000590683 KCNA3P22001 575 aa12.66□□□□□ -0.38
AP3D1-208ENST00000590683 ZCRB1Q8TBF4 217 aaKnown RBP12.66□□□□□ -0.38
AP3D1-208ENST00000590683 LTV1Q96GA3 475 aaPredicted RBP12.66□□□□□ -0.38
AP3D1-208ENST00000590683 DCAF5Q96JK2 942 aa12.66□□□□□ -0.38
AP3D1-208ENST00000590683 CREBZFQ9NS37 354 aa12.66□□□□□ -0.38
AP3D1-208ENST00000590683 NSD3Q9BZ95 1437 aa12.65□□□□□ -0.38
AP3D1-208ENST00000590683 SSFA2P28290 1259 aa12.65□□□□□ -0.38
AP3D1-208ENST00000590683 CNTNAP1P78357 1384 aa12.65□□□□□ -0.38
AP3D1-208ENST00000590683 CENPJQ9HC77 1338 aaPredicted RBP12.64□□□□□ -0.39
AP3D1-208ENST00000590683 HSPA8P11142 646 aaKnown RBP12.64□□□□□ -0.39
AP3D1-208ENST00000590683 NBPF1Q3BBV0 1214 aa12.63□□□□□ -0.39
AP3D1-208ENST00000590683 LINC00116Q8NCU8 138 aa12.63□□□□□ -0.39
AP3D1-208ENST00000590683 ZNF692Q9BU19 519 aaPredicted RBP12.63□□□□□ -0.39
AP3D1-208ENST00000590683 WBP1LQ9NX94 342 aa12.63□□□□□ -0.39
AP3D1-208ENST00000590683 KTN1Q86UP2 1357 aaKnown RBP12.62□□□□□ -0.39
AP3D1-208ENST00000590683 GLTPD2A6NH11 291 aa12.62□□□□□ -0.39
AP3D1-208ENST00000590683 POTECB2RU33 542 aa12.62□□□□□ -0.39
AP3D1-208ENST00000590683 VEGFBP49765 207 aa12.62□□□□□ -0.39
AP3D1-208ENST00000590683 RASSF7Q02833 373 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms