RNA–Protein interactions for RNA: ENST00000590334.5

APOC1-206, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 508 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-206ENST00000590334 DLG5Q8TDM6 1919 aa16.08■□□□□ 0.16
APOC1-206ENST00000590334 HMOX1P09601 288 aa16.08■□□□□ 0.16
APOC1-206ENST00000590334 RXRBP28702 533 aa16.08■□□□□ 0.16
APOC1-206ENST00000590334 WDR43Q15061 677 aaKnown RBP eCLIP16.08■□□□□ 0.16
APOC1-206ENST00000590334 FAM98CQ17RN3 349 aaKnown RBP16.08■□□□□ 0.16
APOC1-206ENST00000590334 RAPGEF4Q8WZA2 1011 aa16.07■□□□□ 0.16
APOC1-206ENST00000590334 ADAMTS8Q9UP79 889 aa16.07■□□□□ 0.16
APOC1-206ENST00000590334 TNS2Q63HR2 1409 aa16.07■□□□□ 0.16
APOC1-206ENST00000590334 TATP17735 454 aaPredicted RBP16.06■□□□□ 0.16
APOC1-206ENST00000590334 PNNQ9H307 717 aaKnown RBP16.06■□□□□ 0.16
APOC1-206ENST00000590334 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.06■□□□□ 0.16
APOC1-206ENST00000590334 PLEKHF1Q96S99 279 aa16.05■□□□□ 0.16
APOC1-206ENST00000590334 RGS12O14924 1447 aa16.04■□□□□ 0.16
APOC1-206ENST00000590334 PRKAR2BP31323 418 aa16.04■□□□□ 0.16
APOC1-206ENST00000590334 ADAMTS7Q9UKP4 1686 aa16.04■□□□□ 0.16
APOC1-206ENST00000590334 AMOTQ4VCS5 1084 aa16.03■□□□□ 0.16
APOC1-206ENST00000590334 SCN11AQ9UI33 1791 aa16.03■□□□□ 0.16
APOC1-206ENST00000590334 SEPT12Q8IYM1 358 aa16.02■□□□□ 0.16
APOC1-206ENST00000590334 ZCRB1Q8TBF4 217 aaKnown RBP16.02■□□□□ 0.16
APOC1-206ENST00000590334 SBF2Q86WG5 1849 aa16.02■□□□□ 0.16
APOC1-206ENST00000590334 EXOC5O00471 708 aa16.01■□□□□ 0.15
APOC1-206ENST00000590334 DDB1Q16531 1140 aa16.01■□□□□ 0.15
APOC1-206ENST00000590334 PLEKHO1Q53GL0 409 aaPredicted RBP16.01■□□□□ 0.15
APOC1-206ENST00000590334 RUNDC1Q96C34 613 aa16.01■□□□□ 0.15
APOC1-206ENST00000590334 PHACTR3Q96KR7 559 aa16.01■□□□□ 0.15
APOC1-206ENST00000590334 SPG7Q9UQ90 795 aa16.01■□□□□ 0.15
APOC1-206ENST00000590334 EP400Q96L91 3159 aa16■□□□□ 0.15
APOC1-206ENST00000590334 TOGARAM1Q9Y4F4 1720 aa15.99■□□□□ 0.15
APOC1-206ENST00000590334 PCDH11XQ9BZA7 1347 aa15.99■□□□□ 0.15
APOC1-206ENST00000590334 PCDH11YQ9BZA8 1340 aa15.99■□□□□ 0.15
APOC1-206ENST00000590334 FAM9BQ8IZU0 186 aa15.99■□□□□ 0.15
APOC1-206ENST00000590334 DOT1LQ8TEK3 1739 aa15.99■□□□□ 0.15
APOC1-206ENST00000590334 ITGB4P16144 1822 aa15.98■□□□□ 0.15
APOC1-206ENST00000590334 NEFMP07197 916 aa15.98■□□□□ 0.15
APOC1-206ENST00000590334 MTHFSDQ2M296 383 aaKnown RBP15.98■□□□□ 0.15
APOC1-206ENST00000590334 SIPA1L3O60292 1781 aaPredicted RBP15.98■□□□□ 0.15
APOC1-206ENST00000590334 MAPK8IP3Q9UPT6 1336 aa15.97■□□□□ 0.15
APOC1-206ENST00000590334 BCL9O00512 1426 aa15.97■□□□□ 0.15
APOC1-206ENST00000590334 A0A0G2JS52 829 aa15.97■□□□□ 0.15
APOC1-206ENST00000590334 CYP27B1O15528 508 aa15.97■□□□□ 0.15
APOC1-206ENST00000590334 MYT1Q01538 1121 aa15.97■□□□□ 0.15
APOC1-206ENST00000590334 CCDC146Q8IYE0 955 aa15.97■□□□□ 0.15
APOC1-206ENST00000590334 GAS2L2Q8NHY3 880 aa15.97■□□□□ 0.15
APOC1-206ENST00000590334 NHSQ6T4R5 1651 aa15.96■□□□□ 0.15
APOC1-206ENST00000590334 PHKG2P15735 406 aa15.96■□□□□ 0.15
APOC1-206ENST00000590334 PDE3BQ13370 1112 aa15.96■□□□□ 0.15
APOC1-206ENST00000590334 NKX1-1Q15270 411 aaPredicted RBP15.96■□□□□ 0.15
APOC1-206ENST00000590334 ZNF530Q6P9A1 599 aaPredicted RBP15.96■□□□□ 0.15
APOC1-206ENST00000590334 IFNL2Q8IZJ0 200 aa15.96■□□□□ 0.15
APOC1-206ENST00000590334 MARCH10Q8NA82 808 aaPredicted RBP15.96■□□□□ 0.15
APOC1-206ENST00000590334 NFE2L2Q16236 605 aa15.95■□□□□ 0.14
APOC1-206ENST00000590334 AKAP4Q5JQC9 854 aa15.95■□□□□ 0.14
APOC1-206ENST00000590334 KRT27Q7Z3Y8 459 aa15.95■□□□□ 0.14
APOC1-206ENST00000590334 TMPOP42166 694 aaKnown RBP15.94■□□□□ 0.14
APOC1-206ENST00000590334 NCBP3Q53F19 620 aaKnown RBP15.94■□□□□ 0.14
APOC1-206ENST00000590334 DDX54Q8TDD1 881 aaKnown RBP15.94■□□□□ 0.14
APOC1-206ENST00000590334 MAP3K5Q99683 1374 aa15.94■□□□□ 0.14
APOC1-206ENST00000590334 HSP90AB1P08238 724 aaKnown RBP15.93■□□□□ 0.14
APOC1-206ENST00000590334 C1orf141Q5JVX7 400 aa15.93■□□□□ 0.14
APOC1-206ENST00000590334 KDM6AO15550 1401 aaPredicted RBP15.93■□□□□ 0.14
APOC1-206ENST00000590334 MRC1P22897 1456 aa15.92■□□□□ 0.14
APOC1-206ENST00000590334 GNAT3A8MTJ3 354 aa15.92■□□□□ 0.14
APOC1-206ENST00000590334 APAF1O14727 1248 aa15.92■□□□□ 0.14
APOC1-206ENST00000590334 HTATSF1O43719 755 aaKnown RBP15.92■□□□□ 0.14
APOC1-206ENST00000590334 DCAF5Q96JK2 942 aa15.91■□□□□ 0.14
APOC1-206ENST00000590334 TNS1Q9HBL0 1735 aaKnown RBP15.91■□□□□ 0.14
APOC1-206ENST00000590334 CEMIPQ8WUJ3 1361 aa15.9■□□□□ 0.14
APOC1-206ENST00000590334 BTAF1O14981 1849 aa15.9■□□□□ 0.14
APOC1-206ENST00000590334 RIPK4P57078 832 aa15.9■□□□□ 0.14
APOC1-206ENST00000590334 NGEFQ8N5V2 710 aa15.9■□□□□ 0.14
APOC1-206ENST00000590334 PAPPAQ13219 1627 aa15.9■□□□□ 0.14
APOC1-206ENST00000590334 FAM196AQ6ZSG2 479 aa15.89■□□□□ 0.13
APOC1-206ENST00000590334 RNMTO43148 476 aaKnown RBP15.88■□□□□ 0.13
APOC1-206ENST00000590334 LMOD3Q0VAK6 560 aa15.88■□□□□ 0.13
APOC1-206ENST00000590334 CCDC27Q2M243 656 aa15.88■□□□□ 0.13
APOC1-206ENST00000590334 FAM182BQ5T319 152 aa15.88■□□□□ 0.13
APOC1-206ENST00000590334 IL17REQ8NFR9 667 aa15.88■□□□□ 0.13
APOC1-206ENST00000590334 TRIM35Q9UPQ4 493 aa15.88■□□□□ 0.13
APOC1-206ENST00000590334 KAT6BQ8WYB5 2073 aa15.87■□□□□ 0.13
APOC1-206ENST00000590334 ERVV-2B6SEH9 535 aa15.87■□□□□ 0.13
APOC1-206ENST00000590334 MPRIPQ6WCQ1 1025 aa15.87■□□□□ 0.13
APOC1-206ENST00000590334 LGR6Q9HBX8 967 aa15.87■□□□□ 0.13
APOC1-206ENST00000590334 RRP7AQ9Y3A4 280 aaKnown RBP15.87■□□□□ 0.13
APOC1-206ENST00000590334 KDM3BQ7LBC6 1761 aa15.87■□□□□ 0.13
APOC1-206ENST00000590334 RGPD3A6NKT7 1758 aaPredicted RBP15.86■□□□□ 0.13
APOC1-206ENST00000590334 RGPD4Q7Z3J3 1758 aa15.86■□□□□ 0.13
APOC1-206ENST00000590334 UBR2Q8IWV8 1755 aa15.86■□□□□ 0.13
APOC1-206ENST00000590334 NEUROD2Q15784 382 aa15.86■□□□□ 0.13
APOC1-206ENST00000590334 RTF1Q92541 710 aaKnown RBP15.86■□□□□ 0.13
APOC1-206ENST00000590334 MCM10Q7L590 875 aa15.85■□□□□ 0.13
APOC1-206ENST00000590334 LY75O60449 1722 aa15.85■□□□□ 0.13
APOC1-206ENST00000590334 ZNF831Q5JPB2 1677 aa15.83■□□□□ 0.13
APOC1-206ENST00000590334 DCTN1Q14203 1278 aa15.83■□□□□ 0.12
APOC1-206ENST00000590334 WWC1Q8IX03 1113 aa15.83■□□□□ 0.12
APOC1-206ENST00000590334 SLC52A2Q9HAB3 445 aa15.83■□□□□ 0.12
APOC1-206ENST00000590334 PRIM1P49642 420 aaKnown RBP15.82■□□□□ 0.12
APOC1-206ENST00000590334 ACSBG1Q96GR2 724 aa15.82■□□□□ 0.12
APOC1-206ENST00000590334 BCL11BQ9C0K0 894 aaPredicted RBP15.82■□□□□ 0.12
APOC1-206ENST00000590334 ZNF521Q96K83 1311 aa15.82■□□□□ 0.12
APOC1-206ENST00000590334 KCNQ2O43526 872 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms