RNA–Protein interactions for RNA: ENST00000589937.5

RFX1-207, Transcript of regulatory factor X1, humanhuman

TSL 4

Gene RFX1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-207ENST00000589937 NBPF6Q5VWK0 638 aa17.64■□□□□ 0.41
RFX1-207ENST00000589937 NBPF4Q96M43 638 aa17.64■□□□□ 0.41
RFX1-207ENST00000589937 EMILIN1Q9Y6C2 1016 aa17.64■□□□□ 0.41
RFX1-207ENST00000589937 NSD2O96028 1365 aa17.64■□□□□ 0.41
RFX1-207ENST00000589937 ITGB4P16144 1822 aa17.63■□□□□ 0.41
RFX1-207ENST00000589937 HSPA5P11021 654 aaKnown RBP17.63■□□□□ 0.41
RFX1-207ENST00000589937 INSRP06213 1382 aa17.63■□□□□ 0.41
RFX1-207ENST00000589937 FLT4P35916 1363 aa17.63■□□□□ 0.41
RFX1-207ENST00000589937 SMG6Q86US8 1419 aaKnown RBP17.63■□□□□ 0.41
RFX1-207ENST00000589937 QSER1Q2KHR3 1735 aa17.62■□□□□ 0.41
RFX1-207ENST00000589937 ZBTB7AO95365 584 aa17.59■□□□□ 0.41
RFX1-207ENST00000589937 LRRC4BQ9NT99 713 aa17.59■□□□□ 0.41
RFX1-207ENST00000589937 KCNQ4P56696 695 aa17.58■□□□□ 0.4
RFX1-207ENST00000589937 ZNF827Q17R98 1081 aa17.58■□□□□ 0.4
RFX1-207ENST00000589937 SPON1Q9HCB6 807 aa17.58■□□□□ 0.4
RFX1-207ENST00000589937 TAF1LQ8IZX4 1826 aa17.58■□□□□ 0.4
RFX1-207ENST00000589937 C5P01031 1676 aa17.58■□□□□ 0.4
RFX1-207ENST00000589937 NCAPD2Q15021 1401 aa17.57■□□□□ 0.4
RFX1-207ENST00000589937 EIF4G2P78344 907 aaKnown RBP eCLIP17.57■□□□□ 0.4
RFX1-207ENST00000589937 SLC15A2Q16348 729 aa17.57■□□□□ 0.4
RFX1-207ENST00000589937 ZCRB1Q8TBF4 217 aaKnown RBP17.57■□□□□ 0.4
RFX1-207ENST00000589937 SYTL4Q96C24 671 aaPredicted RBP17.57■□□□□ 0.4
RFX1-207ENST00000589937 STK32BQ9NY57 414 aa17.57■□□□□ 0.4
RFX1-207ENST00000589937 CGNL1Q0VF96 1302 aa17.56■□□□□ 0.4
RFX1-207ENST00000589937 PPM1GO15355 546 aaPredicted RBP17.56■□□□□ 0.4
RFX1-207ENST00000589937 TNNT2P45379 298 aaPredicted RBP17.56■□□□□ 0.4
RFX1-207ENST00000589937 PRIM1P49642 420 aaKnown RBP17.56■□□□□ 0.4
RFX1-207ENST00000589937 KIF24Q5T7B8 1368 aa17.55■□□□□ 0.4
RFX1-207ENST00000589937 RAPGEF4Q8WZA2 1011 aa17.54■□□□□ 0.4
RFX1-207ENST00000589937 PPP1R1BQ9UD71 204 aaPredicted RBP17.54■□□□□ 0.4
RFX1-207ENST00000589937 ATF5Q9Y2D1 282 aaPredicted RBP17.54■□□□□ 0.4
RFX1-207ENST00000589937 COL24A1Q17RW2 1714 aa17.54■□□□□ 0.4
RFX1-207ENST00000589937 PTGER2P43116 358 aa17.53■□□□□ 0.4
RFX1-207ENST00000589937 TATP17735 454 aaPredicted RBP17.52■□□□□ 0.4
RFX1-207ENST00000589937 POLKQ9UBT6 870 aa17.52■□□□□ 0.4
RFX1-207ENST00000589937 PANK3Q9H999 370 aa17.51■□□□□ 0.39
RFX1-207ENST00000589937 PCDH11XQ9BZA7 1347 aa17.5■□□□□ 0.39
RFX1-207ENST00000589937 PCDH11YQ9BZA8 1340 aa17.5■□□□□ 0.39
RFX1-207ENST00000589937 CYP27B1O15528 508 aa17.5■□□□□ 0.39
RFX1-207ENST00000589937 WASHC2AQ641Q2 1341 aa17.49■□□□□ 0.39
RFX1-207ENST00000589937 AKT1S1Q96B36 256 aa17.49■□□□□ 0.39
RFX1-207ENST00000589937 EYA1Q99502 592 aa17.49■□□□□ 0.39
RFX1-207ENST00000589937 PNPLA7Q6ZV29 1317 aa17.47■□□□□ 0.39
RFX1-207ENST00000589937 EIF4A2Q14240 407 aaKnown RBP17.47■□□□□ 0.39
RFX1-207ENST00000589937 SGIP1Q9BQI5 828 aa17.47■□□□□ 0.39
RFX1-207ENST00000589937 UBR3Q6ZT12 1888 aa17.47■□□□□ 0.39
RFX1-207ENST00000589937 C4BP0C0L5 1744 aa17.47■□□□□ 0.39
RFX1-207ENST00000589937 UTRNP46939 3433 aa17.46■□□□□ 0.39
RFX1-207ENST00000589937 MTFR1LQ9H019 292 aa17.46■□□□□ 0.39
RFX1-207ENST00000589937 VIRMAQ69YN4 1812 aaKnown RBP17.46■□□□□ 0.39
RFX1-207ENST00000589937 KIF7Q2M1P5 1343 aa17.46■□□□□ 0.38
RFX1-207ENST00000589937 SLC27A3Q5K4L6 730 aa17.45■□□□□ 0.38
RFX1-207ENST00000589937 CCNL1Q9UK58 526 aaPredicted RBP17.45■□□□□ 0.38
RFX1-207ENST00000589937 PALLDQ8WX93 1383 aa17.44■□□□□ 0.38
RFX1-207ENST00000589937 MPRIPQ6WCQ1 1025 aa17.43■□□□□ 0.38
RFX1-207ENST00000589937 FHDC1Q9C0D6 1143 aaPredicted RBP17.43■□□□□ 0.38
RFX1-207ENST00000589937 TFCP2L1Q9NZI6 479 aa17.41■□□□□ 0.38
RFX1-207ENST00000589937 IGSF1Q8N6C5 1336 aa17.41■□□□□ 0.38
RFX1-207ENST00000589937 GOLGB1Q14789 3259 aaKnown RBP17.4■□□□□ 0.38
RFX1-207ENST00000589937 MORC1Q86VD1 984 aa17.39■□□□□ 0.37
RFX1-207ENST00000589937 AMIGO3Q86WK7 504 aa17.39■□□□□ 0.37
RFX1-207ENST00000589937 AEBP1Q8IUX7 1158 aa17.39■□□□□ 0.37
RFX1-207ENST00000589937 PIGBQ92521 554 aa17.39■□□□□ 0.37
RFX1-207ENST00000589937 CHD4Q14839 1912 aa17.39■□□□□ 0.37
RFX1-207ENST00000589937 COL5A3P25940 1745 aaPredicted RBP17.38■□□□□ 0.37
RFX1-207ENST00000589937 PHKG2P15735 406 aa17.38■□□□□ 0.37
RFX1-207ENST00000589937 AMER1Q5JTC6 1135 aaPredicted RBP17.38■□□□□ 0.37
RFX1-207ENST00000589937 SMIM5Q71RC9 77 aa17.38■□□□□ 0.37
RFX1-207ENST00000589937 ARXQ96QS3 562 aa17.38■□□□□ 0.37
RFX1-207ENST00000589937 SYT17Q9BSW7 474 aa17.38■□□□□ 0.37
RFX1-207ENST00000589937 SPG7Q9UQ90 795 aa17.38■□□□□ 0.37
RFX1-207ENST00000589937 SCN11AQ9UI33 1791 aa17.38■□□□□ 0.37
RFX1-207ENST00000589937 KDM6AO15550 1401 aaPredicted RBP17.38■□□□□ 0.37
RFX1-207ENST00000589937 NKX1-1Q15270 411 aaPredicted RBP17.37■□□□□ 0.37
RFX1-207ENST00000589937 MSL1Q68DK7 614 aa17.37■□□□□ 0.37
RFX1-207ENST00000589937 COL23A1Q86Y22 540 aaPredicted RBP17.36■□□□□ 0.37
RFX1-207ENST00000589937 KNSTRNQ9Y448 316 aa17.36■□□□□ 0.37
RFX1-207ENST00000589937 KLHL34Q8N239 644 aa17.35■□□□□ 0.37
RFX1-207ENST00000589937 ASAP1Q9ULH1 1129 aa17.35■□□□□ 0.37
RFX1-207ENST00000589937 MSH5O43196 834 aa17.34■□□□□ 0.37
RFX1-207ENST00000589937 MAP3K5Q99683 1374 aa17.34■□□□□ 0.37
RFX1-207ENST00000589937 C4AP0C0L4 1744 aa17.33■□□□□ 0.37
RFX1-207ENST00000589937 TJP1Q07157 1748 aa17.33■□□□□ 0.37
RFX1-207ENST00000589937 YY1P25490 414 aa17.33■□□□□ 0.36
RFX1-207ENST00000589937 IFNL2Q8IZJ0 200 aa17.33■□□□□ 0.36
RFX1-207ENST00000589937 LINC00116Q8NCU8 138 aa17.33■□□□□ 0.36
RFX1-207ENST00000589937 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.33■□□□□ 0.36
RFX1-207ENST00000589937 TMOD3Q9NYL9 352 aa17.33■□□□□ 0.36
RFX1-207ENST00000589937 MYH14Q7Z406 1995 aaKnown RBP17.33■□□□□ 0.36
RFX1-207ENST00000589937 ZNF831Q5JPB2 1677 aa17.32■□□□□ 0.36
RFX1-207ENST00000589937 KDRP35968 1356 aa17.32■□□□□ 0.36
RFX1-207ENST00000589937 CNGB1Q14028 1251 aaPredicted RBP17.32■□□□□ 0.36
RFX1-207ENST00000589937 ITPK1Q13572 414 aa17.31■□□□□ 0.36
RFX1-207ENST00000589937 CC2D1BQ5T0F9 858 aaKnown RBP17.31■□□□□ 0.36
RFX1-207ENST00000589937 ZNF530Q6P9A1 599 aaPredicted RBP17.31■□□□□ 0.36
RFX1-207ENST00000589937 NLGN2Q8NFZ4 835 aa17.31■□□□□ 0.36
RFX1-207ENST00000589937 SLC16A10Q8TF71 515 aa17.31■□□□□ 0.36
RFX1-207ENST00000589937 COL3A1P02461 1466 aaPredicted RBP17.31■□□□□ 0.36
RFX1-207ENST00000589937 PLEKHG2Q9H7P9 1386 aa17.3■□□□□ 0.36
RFX1-207ENST00000589937 LOC102724428A0A0B4J2F2 783 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms