RNA–Protein interactions for RNA: ENST00000589877.5

SMAD2-211, Transcript of SMAD family member 2, humanhuman

TSL 3

Gene SMAD2, Length 527 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD2-211ENST00000589877 NSD3Q9BZ95 1437 aa23.27■■□□□ 1.32
SMAD2-211ENST00000589877 SYTL4Q96C24 671 aaPredicted RBP23.27■■□□□ 1.32
SMAD2-211ENST00000589877 MYOM1P52179 1685 aa23.27■■□□□ 1.32
SMAD2-211ENST00000589877 CGNL1Q0VF96 1302 aa23.27■■□□□ 1.32
SMAD2-211ENST00000589877 KIF24Q5T7B8 1368 aa23.27■■□□□ 1.31
SMAD2-211ENST00000589877 SMG6Q86US8 1419 aaKnown RBP23.26■■□□□ 1.31
SMAD2-211ENST00000589877 FLT4P35916 1363 aa23.26■■□□□ 1.31
SMAD2-211ENST00000589877 SLC27A3Q5K4L6 730 aa23.25■■□□□ 1.31
SMAD2-211ENST00000589877 RAPGEF4Q8WZA2 1011 aa23.25■■□□□ 1.31
SMAD2-211ENST00000589877 MTFR1LQ9H019 292 aa23.25■■□□□ 1.31
SMAD2-211ENST00000589877 PAPPAQ13219 1627 aa23.24■■□□□ 1.31
SMAD2-211ENST00000589877 ZNF827Q17R98 1081 aa23.24■■□□□ 1.31
SMAD2-211ENST00000589877 EMILIN1Q9Y6C2 1016 aa23.24■■□□□ 1.31
SMAD2-211ENST00000589877 SHANK3Q9BYB0 1731 aa23.24■■□□□ 1.31
SMAD2-211ENST00000589877 TATP17735 454 aaPredicted RBP23.23■■□□□ 1.31
SMAD2-211ENST00000589877 AKT1S1Q96B36 256 aa23.22■■□□□ 1.31
SMAD2-211ENST00000589877 DCAF8L1A6NGE4 600 aa23.21■■□□□ 1.31
SMAD2-211ENST00000589877 SGIP1Q9BQI5 828 aa23.21■■□□□ 1.31
SMAD2-211ENST00000589877 POLR3GLQ9BT43 218 aa23.21■■□□□ 1.31
SMAD2-211ENST00000589877 NSD2O96028 1365 aa23.21■■□□□ 1.31
SMAD2-211ENST00000589877 DOT1LQ8TEK3 1739 aa23.2■■□□□ 1.3
SMAD2-211ENST00000589877 PPM1GO15355 546 aaPredicted RBP23.19■■□□□ 1.3
SMAD2-211ENST00000589877 KCNQ4P56696 695 aa23.19■■□□□ 1.3
SMAD2-211ENST00000589877 EIF4G2P78344 907 aaKnown RBP eCLIP23.19■■□□□ 1.3
SMAD2-211ENST00000589877 WASHC2AQ641Q2 1341 aa23.17■■□□□ 1.3
SMAD2-211ENST00000589877 CCER1Q8TC90 406 aaPredicted RBP23.17■■□□□ 1.3
SMAD2-211ENST00000589877 SYT17Q9BSW7 474 aa23.17■■□□□ 1.3
SMAD2-211ENST00000589877 PCDH11XQ9BZA7 1347 aa23.16■■□□□ 1.3
SMAD2-211ENST00000589877 PCDH11YQ9BZA8 1340 aa23.16■■□□□ 1.3
SMAD2-211ENST00000589877 HSPA5P11021 654 aaKnown RBP23.16■■□□□ 1.3
SMAD2-211ENST00000589877 FHDC1Q9C0D6 1143 aaPredicted RBP23.16■■□□□ 1.3
SMAD2-211ENST00000589877 CYP27B1O15528 508 aa23.15■■□□□ 1.3
SMAD2-211ENST00000589877 SLC16A10Q8TF71 515 aa23.15■■□□□ 1.3
SMAD2-211ENST00000589877 POLKQ9UBT6 870 aa23.15■■□□□ 1.3
SMAD2-211ENST00000589877 LY75O60449 1722 aa23.15■■□□□ 1.3
SMAD2-211ENST00000589877 MAP2P11137 1827 aaKnown RBP23.15■■□□□ 1.3
SMAD2-211ENST00000589877 YY1P25490 414 aa23.14■■□□□ 1.29
SMAD2-211ENST00000589877 ARXQ96QS3 562 aa23.14■■□□□ 1.29
SMAD2-211ENST00000589877 TFCP2L1Q9NZI6 479 aa23.14■■□□□ 1.29
SMAD2-211ENST00000589877 CCNL1Q9UK58 526 aaPredicted RBP23.14■■□□□ 1.29
SMAD2-211ENST00000589877 PNPLA7Q6ZV29 1317 aa23.13■■□□□ 1.29
SMAD2-211ENST00000589877 EYA1Q99502 592 aa23.12■■□□□ 1.29
SMAD2-211ENST00000589877 QSER1Q2KHR3 1735 aa23.11■■□□□ 1.29
SMAD2-211ENST00000589877 NCAPD2Q15021 1401 aa23.11■■□□□ 1.29
SMAD2-211ENST00000589877 PANK3Q9H999 370 aa23.11■■□□□ 1.29
SMAD2-211ENST00000589877 ANKRD26Q9UPS8 1709 aa23.11■■□□□ 1.29
SMAD2-211ENST00000589877 MPRIPQ6WCQ1 1025 aa23.1■■□□□ 1.29
SMAD2-211ENST00000589877 TNNT2P45379 298 aaPredicted RBP23.09■■□□□ 1.29
SMAD2-211ENST00000589877 NKX1-1Q15270 411 aaPredicted RBP23.08■■□□□ 1.29
SMAD2-211ENST00000589877 SPG7Q9UQ90 795 aa23.08■■□□□ 1.29
SMAD2-211ENST00000589877 PKD1L3Q7Z443 1732 aa23.06■■□□□ 1.28
SMAD2-211ENST00000589877 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.06■■□□□ 1.281e-7■■■□□ 19
SMAD2-211ENST00000589877 TUBGCP6Q96RT7 1819 aa23.05■■□□□ 1.28
SMAD2-211ENST00000589877 MAP3K5Q99683 1374 aa23.05■■□□□ 1.28
SMAD2-211ENST00000589877 POLD1P28340 1107 aa23.05■■□□□ 1.28
SMAD2-211ENST00000589877 EIF4A2Q14240 407 aaKnown RBP23.05■■□□□ 1.28
SMAD2-211ENST00000589877 PALLDQ8WX93 1383 aa23.04■■□□□ 1.28
SMAD2-211ENST00000589877 HMGB2P26583 209 aaKnown RBP23.04■■□□□ 1.28
SMAD2-211ENST00000589877 COL23A1Q86Y22 540 aaPredicted RBP23.04■■□□□ 1.28
SMAD2-211ENST00000589877 PIGBQ92521 554 aa23.04■■□□□ 1.28
SMAD2-211ENST00000589877 SMARCC1Q92922 1105 aaPredicted RBP23.03■■□□□ 1.28
SMAD2-211ENST00000589877 ITGB4P16144 1822 aa23.03■■□□□ 1.28
SMAD2-211ENST00000589877 COL24A1Q17RW2 1714 aa23.02■■□□□ 1.28
SMAD2-211ENST00000589877 TOGARAM1Q9Y4F4 1720 aa23.02■■□□□ 1.28
SMAD2-211ENST00000589877 MSH5O43196 834 aa23.01■■□□□ 1.27
SMAD2-211ENST00000589877 IFNL2Q8IZJ0 200 aa23.01■■□□□ 1.27
SMAD2-211ENST00000589877 UTRNP46939 3433 aa23.01■■□□□ 1.27
SMAD2-211ENST00000589877 PHKG2P15735 406 aa23■■□□□ 1.27
SMAD2-211ENST00000589877 C5P01031 1676 aa22.99■■□□□ 1.27
SMAD2-211ENST00000589877 MORC1Q86VD1 984 aa22.98■■□□□ 1.27
SMAD2-211ENST00000589877 KLHL34Q8N239 644 aa22.98■■□□□ 1.27
SMAD2-211ENST00000589877 TAF1LQ8IZX4 1826 aa22.97■■□□□ 1.27
SMAD2-211ENST00000589877 FLAD1Q8NFF5 587 aa22.97■■□□□ 1.27
SMAD2-211ENST00000589877 IGSF1Q8N6C5 1336 aa22.97■■□□□ 1.27
SMAD2-211ENST00000589877 TMOD3Q9NYL9 352 aa22.96■■□□□ 1.27
SMAD2-211ENST00000589877 KNSTRNQ9Y448 316 aa22.96■■□□□ 1.27
SMAD2-211ENST00000589877 PLEKHG2Q9H7P9 1386 aa22.94■■□□□ 1.26
SMAD2-211ENST00000589877 GPR162Q16538 588 aa22.94■■□□□ 1.26
SMAD2-211ENST00000589877 ASAP1Q9ULH1 1129 aa22.94■■□□□ 1.26
SMAD2-211ENST00000589877 LOC102724428A0A0B4J2F2 783 aa22.93■■□□□ 1.26
SMAD2-211ENST00000589877 SIK1P57059 783 aa22.93■■□□□ 1.26
SMAD2-211ENST00000589877 MSL1Q68DK7 614 aa22.93■■□□□ 1.26
SMAD2-211ENST00000589877 AK7Q96M32 723 aa22.93■■□□□ 1.26
SMAD2-211ENST00000589877 C4BP0C0L5 1744 aa22.92■■□□□ 1.26
SMAD2-211ENST00000589877 PLEKHO1Q53GL0 409 aaPredicted RBP22.92■■□□□ 1.26
SMAD2-211ENST00000589877 NLGN2Q8NFZ4 835 aa22.92■■□□□ 1.26
SMAD2-211ENST00000589877 AMIGO3Q86WK7 504 aa22.91■■□□□ 1.26
SMAD2-211ENST00000589877 ATG3Q9NT62 314 aa22.91■■□□□ 1.26
SMAD2-211ENST00000589877 ERVV-2B6SEH9 535 aa22.9■■□□□ 1.26
SMAD2-211ENST00000589877 LINC00116Q8NCU8 138 aa22.9■■□□□ 1.26
SMAD2-211ENST00000589877 KIF7Q2M1P5 1343 aa22.89■■□□□ 1.26
SMAD2-211ENST00000589877 HSP90AB1P08238 724 aaKnown RBP22.89■■□□□ 1.25
SMAD2-211ENST00000589877 ATP6V1AP38606 617 aa22.89■■□□□ 1.25
SMAD2-211ENST00000589877 AMOTQ4VCS5 1084 aa22.89■■□□□ 1.25
SMAD2-211ENST00000589877 AMER1Q5JTC6 1135 aaPredicted RBP22.89■■□□□ 1.25
SMAD2-211ENST00000589877 CHD4Q14839 1912 aa22.88■■□□□ 1.25
SMAD2-211ENST00000589877 ITPK1Q13572 414 aa22.88■■□□□ 1.25
SMAD2-211ENST00000589877 SMIM5Q71RC9 77 aa22.88■■□□□ 1.25
SMAD2-211ENST00000589877 AEBP1Q8IUX7 1158 aa22.88■■□□□ 1.25
SMAD2-211ENST00000589877 ZNF784Q8NCA9 323 aaPredicted RBP22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms