RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 CDCA7Q9BWT1 371 aaPredicted RBP20.14■□□□□ 0.81
ATG4D-211ENST00000589753 PLEKHG2Q9H7P9 1386 aa20.13■□□□□ 0.81
ATG4D-211ENST00000589753 FAM98CQ17RN3 349 aaKnown RBP20.13■□□□□ 0.81
ATG4D-211ENST00000589753 RUNDC1Q96C34 613 aa20.13■□□□□ 0.81
ATG4D-211ENST00000589753 OVOS2A0A0G2JMS6 1433 aa20.12■□□□□ 0.81
ATG4D-211ENST00000589753 MAPK8IP3Q9UPT6 1336 aa20.12■□□□□ 0.81
ATG4D-211ENST00000589753 SOCS7O14512 581 aa20.12■□□□□ 0.81
ATG4D-211ENST00000589753 RBM6P78332 1123 aaKnown RBP20.12■□□□□ 0.81
ATG4D-211ENST00000589753 PHACTR3Q96KR7 559 aa20.11■□□□□ 0.81
ATG4D-211ENST00000589753 AMOTQ4VCS5 1084 aa20.1■□□□□ 0.81
ATG4D-211ENST00000589753 PLEKHO1Q53GL0 409 aaPredicted RBP20.1■□□□□ 0.81
ATG4D-211ENST00000589753 POTEAQ6S8J7 498 aa20.1■□□□□ 0.81
ATG4D-211ENST00000589753 RXRBP28702 533 aa20.09■□□□□ 0.81
ATG4D-211ENST00000589753 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.09■□□□□ 0.81
ATG4D-211ENST00000589753 SPG7Q9UQ90 795 aa20.09■□□□□ 0.81
ATG4D-211ENST00000589753 THSD7AQ9UPZ6 1657 aa20.09■□□□□ 0.81
ATG4D-211ENST00000589753 PKD1L3Q7Z443 1732 aa20.08■□□□□ 0.81
ATG4D-211ENST00000589753 A0A0G2JS52 829 aa20.08■□□□□ 0.81
ATG4D-211ENST00000589753 ONECUT3O60422 494 aaPredicted RBP20.08■□□□□ 0.81
ATG4D-211ENST00000589753 MYT1Q01538 1121 aa20.08■□□□□ 0.81
ATG4D-211ENST00000589753 ZCRB1Q8TBF4 217 aaKnown RBP20.08■□□□□ 0.81
ATG4D-211ENST00000589753 EXOC5O00471 708 aa20.07■□□□□ 0.8
ATG4D-211ENST00000589753 DDB1Q16531 1140 aa20.07■□□□□ 0.8
ATG4D-211ENST00000589753 MTHFSDQ2M296 383 aaKnown RBP20.07■□□□□ 0.8
ATG4D-211ENST00000589753 LRRC37A3O60309 1634 aa20.06■□□□□ 0.8
ATG4D-211ENST00000589753 TNS2Q63HR2 1409 aa20.06■□□□□ 0.8
ATG4D-211ENST00000589753 GAS2L2Q8NHY3 880 aa20.06■□□□□ 0.8
ATG4D-211ENST00000589753 APAF1O14727 1248 aa20.05■□□□□ 0.8
ATG4D-211ENST00000589753 SEPT12Q8IYM1 358 aa20.05■□□□□ 0.8
ATG4D-211ENST00000589753 PCDH11XQ9BZA7 1347 aa20.04■□□□□ 0.8
ATG4D-211ENST00000589753 PCDH11YQ9BZA8 1340 aa20.04■□□□□ 0.8
ATG4D-211ENST00000589753 NFE2L2Q16236 605 aa20.04■□□□□ 0.8
ATG4D-211ENST00000589753 ZNF530Q6P9A1 599 aaPredicted RBP20.04■□□□□ 0.8
ATG4D-211ENST00000589753 SHANK3Q9BYB0 1731 aa20.03■□□□□ 0.8
ATG4D-211ENST00000589753 TMPOP42166 694 aaKnown RBP20.03■□□□□ 0.8
ATG4D-211ENST00000589753 C1orf141Q5JVX7 400 aa20.02■□□□□ 0.8
ATG4D-211ENST00000589753 DDX54Q8TDD1 881 aaKnown RBP20.02■□□□□ 0.8
ATG4D-211ENST00000589753 RRP7AQ9Y3A4 280 aaKnown RBP20.02■□□□□ 0.8
ATG4D-211ENST00000589753 CYP27B1O15528 508 aa20.01■□□□□ 0.79
ATG4D-211ENST00000589753 NEUROD2Q15784 382 aa20.01■□□□□ 0.79
ATG4D-211ENST00000589753 AKAP4Q5JQC9 854 aa20.01■□□□□ 0.79
ATG4D-211ENST00000589753 IFNL2Q8IZJ0 200 aa20.01■□□□□ 0.79
ATG4D-211ENST00000589753 SENP3-EIF4A1A0A087X0R7 540 aa20■□□□□ 0.79
ATG4D-211ENST00000589753 PHKG2P15735 406 aa20■□□□□ 0.79
ATG4D-211ENST00000589753 RIPK4P57078 832 aa20■□□□□ 0.79
ATG4D-211ENST00000589753 PDE3BQ13370 1112 aa20■□□□□ 0.79
ATG4D-211ENST00000589753 MAP3K5Q99683 1374 aa19.99■□□□□ 0.79
ATG4D-211ENST00000589753 GNAT3A8MTJ3 354 aa19.99■□□□□ 0.79
ATG4D-211ENST00000589753 RGS12O14924 1447 aa19.99■□□□□ 0.79
ATG4D-211ENST00000589753 DLG5Q8TDM6 1919 aa19.98■□□□□ 0.79
ATG4D-211ENST00000589753 HSP90AB1P08238 724 aaKnown RBP19.97■□□□□ 0.79
ATG4D-211ENST00000589753 LMOD3Q0VAK6 560 aa19.97■□□□□ 0.79
ATG4D-211ENST00000589753 MARCH10Q8NA82 808 aaPredicted RBP19.97■□□□□ 0.79
ATG4D-211ENST00000589753 HTATSF1O43719 755 aaKnown RBP19.96■□□□□ 0.79
ATG4D-211ENST00000589753 HNRNPUQ00839 825 aaKnown RBP eCLIP19.96■□□□□ 0.79
ATG4D-211ENST00000589753 NCBP3Q53F19 620 aaKnown RBP19.96■□□□□ 0.79
ATG4D-211ENST00000589753 NGEFQ8N5V2 710 aa19.96■□□□□ 0.79
ATG4D-211ENST00000589753 RTF1Q92541 710 aaKnown RBP19.96■□□□□ 0.79
ATG4D-211ENST00000589753 SALL2Q9Y467 1007 aaPredicted RBP19.96■□□□□ 0.79
ATG4D-211ENST00000589753 BRWD3Q6RI45 1802 aa19.95■□□□□ 0.78
ATG4D-211ENST00000589753 NKX1-1Q15270 411 aaPredicted RBP19.95■□□□□ 0.78
ATG4D-211ENST00000589753 MPRIPQ6WCQ1 1025 aa19.95■□□□□ 0.78
ATG4D-211ENST00000589753 KRT27Q7Z3Y8 459 aa19.95■□□□□ 0.78
ATG4D-211ENST00000589753 CCDC27Q2M243 656 aa19.94■□□□□ 0.78
ATG4D-211ENST00000589753 DCAF5Q96JK2 942 aa19.94■□□□□ 0.78
ATG4D-211ENST00000589753 TRIM35Q9UPQ4 493 aa19.94■□□□□ 0.78
ATG4D-211ENST00000589753 KDM6AO15550 1401 aaPredicted RBP19.93■□□□□ 0.78
ATG4D-211ENST00000589753 RNMTO43148 476 aaKnown RBP19.92■□□□□ 0.78
ATG4D-211ENST00000589753 DCTN1Q14203 1278 aa19.92■□□□□ 0.78
ATG4D-211ENST00000589753 MCM10Q7L590 875 aa19.92■□□□□ 0.78
ATG4D-211ENST00000589753 LGR6Q9HBX8 967 aa19.92■□□□□ 0.78
ATG4D-211ENST00000589753 ADAMTS7Q9UKP4 1686 aa19.91■□□□□ 0.78
ATG4D-211ENST00000589753 IL17REQ8NFR9 667 aa19.91■□□□□ 0.78
ATG4D-211ENST00000589753 SCN11AQ9UI33 1791 aa19.9■□□□□ 0.78
ATG4D-211ENST00000589753 FAM182BQ5T319 152 aa19.9■□□□□ 0.78
ATG4D-211ENST00000589753 WWC1Q8IX03 1113 aa19.9■□□□□ 0.78
ATG4D-211ENST00000589753 YTHDC1Q96MU7 727 aaKnown RBP19.9■□□□□ 0.78
ATG4D-211ENST00000589753 CEMIPQ8WUJ3 1361 aa19.9■□□□□ 0.78
ATG4D-211ENST00000589753 VIRMAQ69YN4 1812 aaKnown RBP19.89■□□□□ 0.77
ATG4D-211ENST00000589753 THUMPD2Q9BTF0 503 aaKnown RBP19.89■□□□□ 0.77
ATG4D-211ENST00000589753 BCL9O00512 1426 aa19.88■□□□□ 0.77
ATG4D-211ENST00000589753 ERVV-2B6SEH9 535 aa19.88■□□□□ 0.77
ATG4D-211ENST00000589753 TOGARAM1Q9Y4F4 1720 aa19.88■□□□□ 0.77
ATG4D-211ENST00000589753 CALD1Q05682 793 aaKnown RBP19.87■□□□□ 0.77
ATG4D-211ENST00000589753 TEFQ10587 303 aa19.87■□□□□ 0.77
ATG4D-211ENST00000589753 FAM196AQ6ZSG2 479 aa19.87■□□□□ 0.77
ATG4D-211ENST00000589753 DOT1LQ8TEK3 1739 aa19.87■□□□□ 0.77
ATG4D-211ENST00000589753 ZNF521Q96K83 1311 aa19.86■□□□□ 0.77
ATG4D-211ENST00000589753 CABP4P57796 275 aa19.86■□□□□ 0.77
ATG4D-211ENST00000589753 MRC1P22897 1456 aa19.86■□□□□ 0.77
ATG4D-211ENST00000589753 ZBED9Q6R2W3 1325 aa19.85■□□□□ 0.77
ATG4D-211ENST00000589753 WDR63Q8IWG1 891 aa19.85■□□□□ 0.77
ATG4D-211ENST00000589753 ACSBG1Q96GR2 724 aa19.85■□□□□ 0.77
ATG4D-211ENST00000589753 SLC52A2Q9HAB3 445 aa19.85■□□□□ 0.77
ATG4D-211ENST00000589753 PRIM1P49642 420 aaKnown RBP19.84■□□□□ 0.77
ATG4D-211ENST00000589753 SYTL4Q96C24 671 aaPredicted RBP19.84■□□□□ 0.77
ATG4D-211ENST00000589753 NFATC2IPQ8NCF5 419 aa19.83■□□□□ 0.77
ATG4D-211ENST00000589753 TMOD3Q9NYL9 352 aa19.83■□□□□ 0.77
ATG4D-211ENST00000589753 ITGB4P16144 1822 aa19.82■□□□□ 0.76
ATG4D-211ENST00000589753 TAF7Q15545 349 aaPredicted RBP19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms