RNA–Protein interactions for RNA: ENST00000589294.1

DNMT1-218, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-218ENST00000589294 DISP2A7MBM2 1401 aa16.15■□□□□ 0.18
DNMT1-218ENST00000589294 NEFMP07197 916 aa16.15■□□□□ 0.18
DNMT1-218ENST00000589294 PRKAR2BP31323 418 aa16.15■□□□□ 0.18
DNMT1-218ENST00000589294 ZCRB1Q8TBF4 217 aaKnown RBP16.15■□□□□ 0.18
DNMT1-218ENST00000589294 PLEKHF1Q96S99 279 aa16.15■□□□□ 0.18
DNMT1-218ENST00000589294 SPG7Q9UQ90 795 aa16.15■□□□□ 0.18
DNMT1-218ENST00000589294 SEPT12Q8IYM1 358 aa16.14■□□□□ 0.17
DNMT1-218ENST00000589294 FAM9BQ8IZU0 186 aa16.14■□□□□ 0.17
DNMT1-218ENST00000589294 RUNDC1Q96C34 613 aa16.14■□□□□ 0.17
DNMT1-218ENST00000589294 GLI3P10071 1580 aa16.13■□□□□ 0.17
DNMT1-218ENST00000589294 DDB1Q16531 1140 aa16.13■□□□□ 0.17
DNMT1-218ENST00000589294 OVOS2A0A0G2JMS6 1433 aa16.12■□□□□ 0.17
DNMT1-218ENST00000589294 PHACTR3Q96KR7 559 aa16.12■□□□□ 0.17
DNMT1-218ENST00000589294 MEGF6O75095 1541 aa16.11■□□□□ 0.17
DNMT1-218ENST00000589294 MAPK8IP3Q9UPT6 1336 aa16.11■□□□□ 0.17
DNMT1-218ENST00000589294 A0A0G2JS52 829 aa16.1■□□□□ 0.17
DNMT1-218ENST00000589294 MYT1Q01538 1121 aa16.1■□□□□ 0.17
DNMT1-218ENST00000589294 PDE3BQ13370 1112 aa16.1■□□□□ 0.17
DNMT1-218ENST00000589294 GAS2L2Q8NHY3 880 aa16.1■□□□□ 0.17
DNMT1-218ENST00000589294 MTHFSDQ2M296 383 aaKnown RBP16.09■□□□□ 0.17
DNMT1-218ENST00000589294 CCDC146Q8IYE0 955 aa16.08■□□□□ 0.16
DNMT1-218ENST00000589294 IFNL2Q8IZJ0 200 aa16.08■□□□□ 0.16
DNMT1-218ENST00000589294 DDX54Q8TDD1 881 aaKnown RBP16.08■□□□□ 0.16
DNMT1-218ENST00000589294 PCDH11XQ9BZA7 1347 aa16.08■□□□□ 0.16
DNMT1-218ENST00000589294 PCDH11YQ9BZA8 1340 aa16.08■□□□□ 0.16
DNMT1-218ENST00000589294 NFE2L2Q16236 605 aa16.07■□□□□ 0.16
DNMT1-218ENST00000589294 NCBP3Q53F19 620 aaKnown RBP16.07■□□□□ 0.16
DNMT1-218ENST00000589294 AKAP4Q5JQC9 854 aa16.07■□□□□ 0.16
DNMT1-218ENST00000589294 C1orf141Q5JVX7 400 aa16.07■□□□□ 0.16
DNMT1-218ENST00000589294 ZNF530Q6P9A1 599 aaPredicted RBP16.07■□□□□ 0.16
DNMT1-218ENST00000589294 PARP4Q9UKK3 1724 aaKnown RBP16.07■□□□□ 0.16
DNMT1-218ENST00000589294 THSD7AQ9UPZ6 1657 aa16.06■□□□□ 0.16
DNMT1-218ENST00000589294 CYP27B1O15528 508 aa16.06■□□□□ 0.16
DNMT1-218ENST00000589294 HTATSF1O43719 755 aaKnown RBP16.06■□□□□ 0.16
DNMT1-218ENST00000589294 HSP90AB1P08238 724 aaKnown RBP16.06■□□□□ 0.16
DNMT1-218ENST00000589294 PHKG2P15735 406 aa16.06■□□□□ 0.16
DNMT1-218ENST00000589294 TMPOP42166 694 aaKnown RBP16.06■□□□□ 0.16
DNMT1-218ENST00000589294 NKX1-1Q15270 411 aaPredicted RBP16.06■□□□□ 0.16
DNMT1-218ENST00000589294 KRT27Q7Z3Y8 459 aa16.06■□□□□ 0.16
DNMT1-218ENST00000589294 NGEFQ8N5V2 710 aa16.06■□□□□ 0.16
DNMT1-218ENST00000589294 MARCH10Q8NA82 808 aaPredicted RBP16.06■□□□□ 0.16
DNMT1-218ENST00000589294 TNS2Q63HR2 1409 aa16.05■□□□□ 0.16
DNMT1-218ENST00000589294 APAF1O14727 1248 aa16.05■□□□□ 0.16
DNMT1-218ENST00000589294 GNAT3A8MTJ3 354 aa16.04■□□□□ 0.16
DNMT1-218ENST00000589294 RIPK4P57078 832 aa16.04■□□□□ 0.16
DNMT1-218ENST00000589294 WNK3Q9BYP7 1800 aa16.03■□□□□ 0.16
DNMT1-218ENST00000589294 DCAF5Q96JK2 942 aa16.03■□□□□ 0.16
DNMT1-218ENST00000589294 RGS12O14924 1447 aa16.02■□□□□ 0.16
DNMT1-218ENST00000589294 PKD1L3Q7Z443 1732 aa16.02■□□□□ 0.16
DNMT1-218ENST00000589294 LMOD3Q0VAK6 560 aa16.02■□□□□ 0.16
DNMT1-218ENST00000589294 FAM196AQ6ZSG2 479 aa16.02■□□□□ 0.16
DNMT1-218ENST00000589294 RTF1Q92541 710 aaKnown RBP16.02■□□□□ 0.16
DNMT1-218ENST00000589294 BCL9O00512 1426 aa16.01■□□□□ 0.15
DNMT1-218ENST00000589294 LRRC37A3O60309 1634 aa16.01■□□□□ 0.15
DNMT1-218ENST00000589294 MAP3K5Q99683 1374 aa16■□□□□ 0.15
DNMT1-218ENST00000589294 ERVV-2B6SEH9 535 aa16■□□□□ 0.15
DNMT1-218ENST00000589294 NEUROD2Q15784 382 aa16■□□□□ 0.15
DNMT1-218ENST00000589294 CCDC27Q2M243 656 aa16■□□□□ 0.15
DNMT1-218ENST00000589294 RNMTO43148 476 aaKnown RBP15.99■□□□□ 0.15
DNMT1-218ENST00000589294 MPRIPQ6WCQ1 1025 aa15.99■□□□□ 0.15
DNMT1-218ENST00000589294 IL17REQ8NFR9 667 aa15.99■□□□□ 0.15
DNMT1-218ENST00000589294 RRP7AQ9Y3A4 280 aaKnown RBP15.99■□□□□ 0.15
DNMT1-218ENST00000589294 LGR6Q9HBX8 967 aa15.98■□□□□ 0.15
DNMT1-218ENST00000589294 TRIM35Q9UPQ4 493 aa15.98■□□□□ 0.15
DNMT1-218ENST00000589294 FAM182BQ5T319 152 aa15.96■□□□□ 0.15
DNMT1-218ENST00000589294 MCM10Q7L590 875 aa15.96■□□□□ 0.15
DNMT1-218ENST00000589294 CEMIPQ8WUJ3 1361 aa15.96■□□□□ 0.15
DNMT1-218ENST00000589294 SHANK3Q9BYB0 1731 aa15.96■□□□□ 0.15
DNMT1-218ENST00000589294 BRWD3Q6RI45 1802 aa15.96■□□□□ 0.14
DNMT1-218ENST00000589294 PRIM1P49642 420 aaKnown RBP15.95■□□□□ 0.14
DNMT1-218ENST00000589294 CALD1Q05682 793 aaKnown RBP15.95■□□□□ 0.14
DNMT1-218ENST00000589294 WWC1Q8IX03 1113 aa15.95■□□□□ 0.14
DNMT1-218ENST00000589294 CABP4P57796 275 aa15.94■□□□□ 0.14
DNMT1-218ENST00000589294 TEFQ10587 303 aa15.94■□□□□ 0.14
DNMT1-218ENST00000589294 DCTN1Q14203 1278 aa15.94■□□□□ 0.14
DNMT1-218ENST00000589294 NFATC2IPQ8NCF5 419 aa15.94■□□□□ 0.14
DNMT1-218ENST00000589294 SLC52A2Q9HAB3 445 aa15.94■□□□□ 0.14
DNMT1-218ENST00000589294 KDM6AO15550 1401 aaPredicted RBP15.94■□□□□ 0.14
DNMT1-218ENST00000589294 TAF7Q15545 349 aaPredicted RBP15.93■□□□□ 0.14
DNMT1-218ENST00000589294 WDR63Q8IWG1 891 aa15.93■□□□□ 0.14
DNMT1-218ENST00000589294 BCL11BQ9C0K0 894 aaPredicted RBP15.93■□□□□ 0.14
DNMT1-218ENST00000589294 BABAM1Q9NWV8 329 aa15.93■□□□□ 0.14
DNMT1-218ENST00000589294 TMOD3Q9NYL9 352 aa15.93■□□□□ 0.14
DNMT1-218ENST00000589294 HNRNPUQ00839 825 aaKnown RBP eCLIP15.92■□□□□ 0.14
DNMT1-218ENST00000589294 ACSBG1Q96GR2 724 aa15.92■□□□□ 0.14
DNMT1-218ENST00000589294 SALL2Q9Y467 1007 aaPredicted RBP15.92■□□□□ 0.14
DNMT1-218ENST00000589294 SENP3-EIF4A1A0A087X0R7 540 aa15.91■□□□□ 0.14
DNMT1-218ENST00000589294 KCNQ2O43526 872 aa15.91■□□□□ 0.14
DNMT1-218ENST00000589294 PIGBQ92521 554 aa15.91■□□□□ 0.14
DNMT1-218ENST00000589294 SYTL4Q96C24 671 aaPredicted RBP15.91■□□□□ 0.14
DNMT1-218ENST00000589294 ADAMTS7Q9UKP4 1686 aa15.91■□□□□ 0.14
DNMT1-218ENST00000589294 IL16Q14005 1332 aa15.91■□□□□ 0.14
DNMT1-218ENST00000589294 DLG5Q8TDM6 1919 aa15.9■□□□□ 0.14
DNMT1-218ENST00000589294 THUMPD2Q9BTF0 503 aaKnown RBP15.9■□□□□ 0.14
DNMT1-218ENST00000589294 ZNF521Q96K83 1311 aa15.9■□□□□ 0.14
DNMT1-218ENST00000589294 TRIM37O94972 964 aa15.89■□□□□ 0.13
DNMT1-218ENST00000589294 CCDC125Q86Z20 511 aa15.89■□□□□ 0.13
DNMT1-218ENST00000589294 CFAP44Q96MT7 982 aa15.89■□□□□ 0.13
DNMT1-218ENST00000589294 SCN11AQ9UI33 1791 aa15.89■□□□□ 0.13
DNMT1-218ENST00000589294 BTBD11A6QL63 1104 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms