RNA–Protein interactions for RNA: ENST00000589039.5

GCDH-209, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 5

Gene GCDH, Length 523 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-209ENST00000589039 RXRBP28702 533 aa20.58■□□□□ 0.89
GCDH-209ENST00000589039 FAM98CQ17RN3 349 aaKnown RBP20.58■□□□□ 0.89
GCDH-209ENST00000589039 RAPGEF4Q8WZA2 1011 aa20.58■□□□□ 0.89
GCDH-209ENST00000589039 OVOS2A0A0G2JMS6 1433 aa20.57■□□□□ 0.88
GCDH-209ENST00000589039 FCHSD2O94868 740 aa20.57■□□□□ 0.88
GCDH-209ENST00000589039 TATP17735 454 aaPredicted RBP20.57■□□□□ 0.88
GCDH-209ENST00000589039 RSPH6AQ9H0K4 717 aa20.57■□□□□ 0.88
GCDH-209ENST00000589039 VIRMAQ69YN4 1812 aaKnown RBP20.57■□□□□ 0.88
GCDH-209ENST00000589039 DLG5Q8TDM6 1919 aa20.56■□□□□ 0.88
GCDH-209ENST00000589039 ADAMTS8Q9UP79 889 aa20.55■□□□□ 0.88
GCDH-209ENST00000589039 PNNQ9H307 717 aaKnown RBP20.54■□□□□ 0.88
GCDH-209ENST00000589039 TNS2Q63HR2 1409 aa20.53■□□□□ 0.88
GCDH-209ENST00000589039 PRKAR2BP31323 418 aa20.53■□□□□ 0.88
GCDH-209ENST00000589039 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.52■□□□□ 0.88
GCDH-209ENST00000589039 SEPT12Q8IYM1 358 aa20.51■□□□□ 0.87
GCDH-209ENST00000589039 PLEKHF1Q96S99 279 aa20.51■□□□□ 0.87
GCDH-209ENST00000589039 RGS12O14924 1447 aa20.51■□□□□ 0.87
GCDH-209ENST00000589039 A0A0G2JS52 829 aa20.5■□□□□ 0.87
GCDH-209ENST00000589039 EXOC5O00471 708 aa20.5■□□□□ 0.87
GCDH-209ENST00000589039 MYT1Q01538 1121 aa20.5■□□□□ 0.87
GCDH-209ENST00000589039 DDB1Q16531 1140 aa20.5■□□□□ 0.87
GCDH-209ENST00000589039 AMOTQ4VCS5 1084 aa20.5■□□□□ 0.87
GCDH-209ENST00000589039 PLEKHO1Q53GL0 409 aaPredicted RBP20.49■□□□□ 0.87
GCDH-209ENST00000589039 FAM9BQ8IZU0 186 aa20.49■□□□□ 0.87
GCDH-209ENST00000589039 ZCRB1Q8TBF4 217 aaKnown RBP20.49■□□□□ 0.87
GCDH-209ENST00000589039 SPG7Q9UQ90 795 aa20.49■□□□□ 0.87
GCDH-209ENST00000589039 NEFMP07197 916 aa20.48■□□□□ 0.87
GCDH-209ENST00000589039 RUNDC1Q96C34 613 aa20.48■□□□□ 0.87
GCDH-209ENST00000589039 PHACTR3Q96KR7 559 aa20.48■□□□□ 0.87
GCDH-209ENST00000589039 KAT6BQ8WYB5 2073 aa20.48■□□□□ 0.87
GCDH-209ENST00000589039 PCDH11XQ9BZA7 1347 aa20.47■□□□□ 0.87
GCDH-209ENST00000589039 PCDH11YQ9BZA8 1340 aa20.47■□□□□ 0.87
GCDH-209ENST00000589039 MAPK8IP3Q9UPT6 1336 aa20.47■□□□□ 0.87
GCDH-209ENST00000589039 SCN11AQ9UI33 1791 aa20.46■□□□□ 0.87
GCDH-209ENST00000589039 EP400Q96L91 3159 aa20.46■□□□□ 0.87
GCDH-209ENST00000589039 SBF2Q86WG5 1849 aa20.46■□□□□ 0.87
GCDH-209ENST00000589039 CCDC146Q8IYE0 955 aa20.45■□□□□ 0.86
GCDH-209ENST00000589039 GAS2L2Q8NHY3 880 aa20.45■□□□□ 0.86
GCDH-209ENST00000589039 PDE3BQ13370 1112 aa20.44■□□□□ 0.86
GCDH-209ENST00000589039 MTHFSDQ2M296 383 aaKnown RBP20.44■□□□□ 0.86
GCDH-209ENST00000589039 ZNF530Q6P9A1 599 aaPredicted RBP20.44■□□□□ 0.86
GCDH-209ENST00000589039 ADAMTS7Q9UKP4 1686 aa20.44■□□□□ 0.86
GCDH-209ENST00000589039 CYP27B1O15528 508 aa20.43■□□□□ 0.86
GCDH-209ENST00000589039 ITGB4P16144 1822 aa20.43■□□□□ 0.86
GCDH-209ENST00000589039 DOT1LQ8TEK3 1739 aa20.42■□□□□ 0.86
GCDH-209ENST00000589039 KRT27Q7Z3Y8 459 aa20.42■□□□□ 0.86
GCDH-209ENST00000589039 IFNL2Q8IZJ0 200 aa20.42■□□□□ 0.86
GCDH-209ENST00000589039 MARCH10Q8NA82 808 aaPredicted RBP20.42■□□□□ 0.86
GCDH-209ENST00000589039 DDX54Q8TDD1 881 aaKnown RBP20.42■□□□□ 0.86
GCDH-209ENST00000589039 TOGARAM1Q9Y4F4 1720 aa20.41■□□□□ 0.86
GCDH-209ENST00000589039 PHKG2P15735 406 aa20.41■□□□□ 0.86
GCDH-209ENST00000589039 NFE2L2Q16236 605 aa20.41■□□□□ 0.86
GCDH-209ENST00000589039 AKAP4Q5JQC9 854 aa20.4■□□□□ 0.86
GCDH-209ENST00000589039 C1orf141Q5JVX7 400 aa20.4■□□□□ 0.86
GCDH-209ENST00000589039 MAP3K5Q99683 1374 aa20.39■□□□□ 0.85
GCDH-209ENST00000589039 TMPOP42166 694 aaKnown RBP20.39■□□□□ 0.85
GCDH-209ENST00000589039 NKX1-1Q15270 411 aaPredicted RBP20.39■□□□□ 0.85
GCDH-209ENST00000589039 BCL9O00512 1426 aa20.38■□□□□ 0.85
GCDH-209ENST00000589039 SIPA1L3O60292 1781 aaPredicted RBP20.38■□□□□ 0.85
GCDH-209ENST00000589039 GNAT3A8MTJ3 354 aa20.37■□□□□ 0.85
GCDH-209ENST00000589039 APAF1O14727 1248 aa20.37■□□□□ 0.85
GCDH-209ENST00000589039 HSP90AB1P08238 724 aaKnown RBP20.37■□□□□ 0.85
GCDH-209ENST00000589039 NHSQ6T4R5 1651 aa20.37■□□□□ 0.85
GCDH-209ENST00000589039 KDM6AO15550 1401 aaPredicted RBP20.36■□□□□ 0.85
GCDH-209ENST00000589039 HTATSF1O43719 755 aaKnown RBP20.35■□□□□ 0.85
GCDH-209ENST00000589039 RIPK4P57078 832 aa20.35■□□□□ 0.85
GCDH-209ENST00000589039 DCAF5Q96JK2 942 aa20.35■□□□□ 0.85
GCDH-209ENST00000589039 TNS1Q9HBL0 1735 aaKnown RBP20.34■□□□□ 0.85
GCDH-209ENST00000589039 RRP7AQ9Y3A4 280 aaKnown RBP20.34■□□□□ 0.85
GCDH-209ENST00000589039 LMOD3Q0VAK6 560 aa20.33■□□□□ 0.85
GCDH-209ENST00000589039 NCBP3Q53F19 620 aaKnown RBP20.33■□□□□ 0.85
GCDH-209ENST00000589039 FAM182BQ5T319 152 aa20.33■□□□□ 0.85
GCDH-209ENST00000589039 FAM196AQ6ZSG2 479 aa20.33■□□□□ 0.85
GCDH-209ENST00000589039 MRC1P22897 1456 aa20.32■□□□□ 0.84
GCDH-209ENST00000589039 NEUROD2Q15784 382 aa20.32■□□□□ 0.84
GCDH-209ENST00000589039 MPRIPQ6WCQ1 1025 aa20.32■□□□□ 0.84
GCDH-209ENST00000589039 RTF1Q92541 710 aaKnown RBP20.32■□□□□ 0.84
GCDH-209ENST00000589039 BTAF1O14981 1849 aa20.32■□□□□ 0.84
GCDH-209ENST00000589039 RNMTO43148 476 aaKnown RBP20.31■□□□□ 0.84
GCDH-209ENST00000589039 NGEFQ8N5V2 710 aa20.31■□□□□ 0.84
GCDH-209ENST00000589039 CEMIPQ8WUJ3 1361 aa20.31■□□□□ 0.84
GCDH-209ENST00000589039 LGR6Q9HBX8 967 aa20.3■□□□□ 0.84
GCDH-209ENST00000589039 TRIM35Q9UPQ4 493 aa20.3■□□□□ 0.84
GCDH-209ENST00000589039 ERVV-2B6SEH9 535 aa20.29■□□□□ 0.84
GCDH-209ENST00000589039 CCDC27Q2M243 656 aa20.29■□□□□ 0.84
GCDH-209ENST00000589039 IL17REQ8NFR9 667 aa20.29■□□□□ 0.84
GCDH-209ENST00000589039 MCM10Q7L590 875 aa20.28■□□□□ 0.84
GCDH-209ENST00000589039 DCTN1Q14203 1278 aa20.27■□□□□ 0.84
GCDH-209ENST00000589039 ACSBG1Q96GR2 724 aa20.27■□□□□ 0.84
GCDH-209ENST00000589039 PAPPAQ13219 1627 aa20.27■□□□□ 0.83
GCDH-209ENST00000589039 SENP3-EIF4A1A0A087X0R7 540 aa20.26■□□□□ 0.83
GCDH-209ENST00000589039 KDM3BQ7LBC6 1761 aa20.26■□□□□ 0.83
GCDH-209ENST00000589039 SLC52A2Q9HAB3 445 aa20.25■□□□□ 0.83
GCDH-209ENST00000589039 RGPD3A6NKT7 1758 aaPredicted RBP20.24■□□□□ 0.83
GCDH-209ENST00000589039 RGPD4Q7Z3J3 1758 aa20.24■□□□□ 0.83
GCDH-209ENST00000589039 PRIM1P49642 420 aaKnown RBP20.24■□□□□ 0.83
GCDH-209ENST00000589039 CABP4P57796 275 aa20.24■□□□□ 0.83
GCDH-209ENST00000589039 TEFQ10587 303 aa20.24■□□□□ 0.83
GCDH-209ENST00000589039 WWC1Q8IX03 1113 aa20.24■□□□□ 0.83
GCDH-209ENST00000589039 TMOD3Q9NYL9 352 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms