RNA–Protein interactions for RNA: ENST00000588961.1

KDM4B-207, Transcript of lysine demethylase 4B, humanhuman

TSL 4

Gene KDM4B, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-207ENST00000588961 CRB1P82279 1406 aa11.54□□□□□ -0.56
KDM4B-207ENST00000588961 TCP11L2Q8N4U5 519 aa11.54□□□□□ -0.56
KDM4B-207ENST00000588961 NLRP2Q9NX02 1062 aa11.54□□□□□ -0.56
KDM4B-207ENST00000588961 PEAK1Q9H792 1746 aa11.54□□□□□ -0.56
KDM4B-207ENST00000588961 ERBB3P21860 1342 aa11.54□□□□□ -0.56
KDM4B-207ENST00000588961 CDK12Q9NYV4 1490 aaPredicted RBP11.53□□□□□ -0.56
KDM4B-207ENST00000588961 ONECUT3O60422 494 aaPredicted RBP11.53□□□□□ -0.56
KDM4B-207ENST00000588961 ABCC6O95255 1503 aa11.53□□□□□ -0.56
KDM4B-207ENST00000588961 MAP2P11137 1827 aaKnown RBP11.53□□□□□ -0.56
KDM4B-207ENST00000588961 BLMP54132 1417 aaPredicted RBP11.52□□□□□ -0.56
KDM4B-207ENST00000588961 CARD10Q9BWT7 1032 aa11.52□□□□□ -0.57
KDM4B-207ENST00000588961 RTL1A6NKG5 1358 aa11.52□□□□□ -0.57
KDM4B-207ENST00000588961 FLT4P35916 1363 aa11.52□□□□□ -0.57
KDM4B-207ENST00000588961 SPDYE2BA6NHP3 402 aa11.51□□□□□ -0.57
KDM4B-207ENST00000588961 SPDYE6P0CI01 402 aa11.51□□□□□ -0.57
KDM4B-207ENST00000588961 SPDYE2Q495Y8 402 aa11.51□□□□□ -0.57
KDM4B-207ENST00000588961 BARGINQ6ZT62 677 aa11.51□□□□□ -0.57
KDM4B-207ENST00000588961 THRAP3Q9Y2W1 955 aaKnown RBP11.51□□□□□ -0.57
KDM4B-207ENST00000588961 FAM182BQ5T319 152 aa11.5□□□□□ -0.57
KDM4B-207ENST00000588961 NBPF6Q5VWK0 638 aa11.5□□□□□ -0.57
KDM4B-207ENST00000588961 USHBP1Q8N6Y0 703 aa11.5□□□□□ -0.57
KDM4B-207ENST00000588961 NBPF4Q96M43 638 aa11.5□□□□□ -0.57
KDM4B-207ENST00000588961 PPP4R2Q9NY27 417 aa11.5□□□□□ -0.57
KDM4B-207ENST00000588961 KIF24Q5T7B8 1368 aa11.5□□□□□ -0.57
KDM4B-207ENST00000588961 MTHFSP49914 203 aa11.49□□□□□ -0.57
KDM4B-207ENST00000588961 KRT27Q7Z3Y8 459 aa11.49□□□□□ -0.57
KDM4B-207ENST00000588961 RGPD2P0DJD1 1756 aa11.49□□□□□ -0.57
KDM4B-207ENST00000588961 BRWD3Q6RI45 1802 aa11.49□□□□□ -0.57
KDM4B-207ENST00000588961 PPP2R1AP30153 589 aa11.48□□□□□ -0.57
KDM4B-207ENST00000588961 EIF4A2Q14240 407 aaKnown RBP11.48□□□□□ -0.57
KDM4B-207ENST00000588961 THSD7AQ9UPZ6 1657 aa11.48□□□□□ -0.57
KDM4B-207ENST00000588961 SOCS7O14512 581 aa11.47□□□□□ -0.57
KDM4B-207ENST00000588961 IL2RBP14784 551 aa11.46□□□□□ -0.57
KDM4B-207ENST00000588961 DDB1Q16531 1140 aa11.46□□□□□ -0.57
KDM4B-207ENST00000588961 AKT1S1Q96B36 256 aa11.46□□□□□ -0.57
KDM4B-207ENST00000588961 EYA1Q99502 592 aa11.46□□□□□ -0.57
KDM4B-207ENST00000588961 DISP2A7MBM2 1401 aa11.45□□□□□ -0.58
KDM4B-207ENST00000588961 EXOC5O00471 708 aa11.45□□□□□ -0.58
KDM4B-207ENST00000588961 CDCA7Q9BWT1 371 aaPredicted RBP11.45□□□□□ -0.58
KDM4B-207ENST00000588961 FAM208AQ9UK61 1670 aaKnown RBP11.45□□□□□ -0.58
KDM4B-207ENST00000588961 IL13P35225 146 aa11.44□□□□□ -0.58
KDM4B-207ENST00000588961 UPF1Q92900 1129 aaKnown RBP eCLIP11.44□□□□□ -0.58
KDM4B-207ENST00000588961 WNK3Q9BYP7 1800 aa11.44□□□□□ -0.58
KDM4B-207ENST00000588961 PARP4Q9UKK3 1724 aaKnown RBP11.43□□□□□ -0.58
KDM4B-207ENST00000588961 WDR43Q15061 677 aaKnown RBP eCLIP11.43□□□□□ -0.584e-6■■□□□ 14
KDM4B-207ENST00000588961 MARCH10Q8NA82 808 aaPredicted RBP11.43□□□□□ -0.58
KDM4B-207ENST00000588961 RAPGEF4Q8WZA2 1011 aa11.43□□□□□ -0.58
KDM4B-207ENST00000588961 LRRC37A3O60309 1634 aa11.42□□□□□ -0.58
KDM4B-207ENST00000588961 MEGF6O75095 1541 aa11.42□□□□□ -0.58
KDM4B-207ENST00000588961 DIAPH1O60610 1272 aaKnown RBP11.42□□□□□ -0.58
KDM4B-207ENST00000588961 TATP17735 454 aaPredicted RBP11.42□□□□□ -0.58
KDM4B-207ENST00000588961 DDX54Q8TDD1 881 aaKnown RBP11.42□□□□□ -0.58
KDM4B-207ENST00000588961 AEBP1Q8IUX7 1158 aa11.41□□□□□ -0.58
KDM4B-207ENST00000588961 IGSF1Q8N6C5 1336 aa11.4□□□□□ -0.58
KDM4B-207ENST00000588961 U2SURPO15042 1029 aaKnown RBP11.4□□□□□ -0.58
KDM4B-207ENST00000588961 HMOX1P09601 288 aa11.4□□□□□ -0.58
KDM4B-207ENST00000588961 SULT6B1Q6IMI4 303 aa11.4□□□□□ -0.58
KDM4B-207ENST00000588961 FAM196AQ6ZSG2 479 aa11.4□□□□□ -0.58
KDM4B-207ENST00000588961 ZCRB1Q8TBF4 217 aaKnown RBP11.4□□□□□ -0.58
KDM4B-207ENST00000588961 CFAP53Q96M91 514 aa11.4□□□□□ -0.58
KDM4B-207ENST00000588961 ADAMTS8Q9UP79 889 aa11.4□□□□□ -0.58
KDM4B-207ENST00000588961 SSUH2Q9Y2M2 353 aa11.4□□□□□ -0.58
KDM4B-207ENST00000588961 TNS2Q63HR2 1409 aa11.4□□□□□ -0.58
KDM4B-207ENST00000588961 OVOS2A0A0G2JMS6 1433 aa11.39□□□□□ -0.59
KDM4B-207ENST00000588961 TRIM37O94972 964 aa11.39□□□□□ -0.59
KDM4B-207ENST00000588961 NCAPD2Q15021 1401 aa11.39□□□□□ -0.59
KDM4B-207ENST00000588961 COL3A1P02461 1466 aaPredicted RBP11.38□□□□□ -0.59
KDM4B-207ENST00000588961 ACSBG1Q96GR2 724 aa11.38□□□□□ -0.59
KDM4B-207ENST00000588961 RCAN3Q9UKA8 241 aa11.38□□□□□ -0.59
KDM4B-207ENST00000588961 ZNF521Q96K83 1311 aa11.37□□□□□ -0.59
KDM4B-207ENST00000588961 SPDYE4A6NLX3 237 aa11.37□□□□□ -0.59
KDM4B-207ENST00000588961 PTF1AQ7RTS3 328 aa11.37□□□□□ -0.59
KDM4B-207ENST00000588961 TRMT2AQ8IZ69 625 aaKnown RBP11.37□□□□□ -0.59
KDM4B-207ENST00000588961 RGPD1P0DJD0 1748 aa11.37□□□□□ -0.59
KDM4B-207ENST00000588961 CYP27B1O15528 508 aa11.36□□□□□ -0.59
KDM4B-207ENST00000588961 KCNQ2O43526 872 aa11.36□□□□□ -0.59
KDM4B-207ENST00000588961 GOLGA2Q08379 1002 aa11.36□□□□□ -0.59
KDM4B-207ENST00000588961 SF3B2Q13435 895 aaKnown RBP11.36□□□□□ -0.59
KDM4B-207ENST00000588961 CCDC27Q2M243 656 aa11.36□□□□□ -0.59
KDM4B-207ENST00000588961 CCDC125Q86Z20 511 aa11.36□□□□□ -0.59
KDM4B-207ENST00000588961 PNNQ9H307 717 aaKnown RBP11.36□□□□□ -0.59
KDM4B-207ENST00000588961 SPG7Q9UQ90 795 aa11.36□□□□□ -0.59
KDM4B-207ENST00000588961 SHANK3Q9BYB0 1731 aa11.35□□□□□ -0.59
KDM4B-207ENST00000588961 U2AF1L5P0DN76 240 aaPredicted RBP11.35□□□□□ -0.59
KDM4B-207ENST00000588961 U2AF1Q01081 240 aaKnown RBP eCLIP11.35□□□□□ -0.59
KDM4B-207ENST00000588961 DEFB132Q7Z7B7 95 aa11.35□□□□□ -0.59
KDM4B-207ENST00000588961 PCDH11XQ9BZA7 1347 aa11.35□□□□□ -0.59
KDM4B-207ENST00000588961 PCDH11YQ9BZA8 1340 aa11.35□□□□□ -0.59
KDM4B-207ENST00000588961 KDRP35968 1356 aa11.34□□□□□ -0.59
KDM4B-207ENST00000588961 APBA3O96018 575 aa11.34□□□□□ -0.59
KDM4B-207ENST00000588961 PLEKHO1Q53GL0 409 aaPredicted RBP11.34□□□□□ -0.59
KDM4B-207ENST00000588961 REM2Q8IYK8 340 aaPredicted RBP11.34□□□□□ -0.59
KDM4B-207ENST00000588961 TSHZ2Q9NRE2 1034 aa11.34□□□□□ -0.59
KDM4B-207ENST00000588961 E9PSI1 815 aa11.33□□□□□ -0.6
KDM4B-207ENST00000588961 EN1Q05925 392 aaPredicted RBP11.33□□□□□ -0.6
KDM4B-207ENST00000588961 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.33□□□□□ -0.6
KDM4B-207ENST00000588961 SYTL4Q96C24 671 aaPredicted RBP11.33□□□□□ -0.6
KDM4B-207ENST00000588961 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.33□□□□□ -0.6
KDM4B-207ENST00000588961 PKD1L3Q7Z443 1732 aa11.32□□□□□ -0.6
KDM4B-207ENST00000588961 PHKG2P15735 406 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms