RNA–Protein interactions for RNA: ENST00000588289.1

TMED1-204, Transcript of transmembrane p24 trafficking protein 1, humanhuman

TSL 2 BASIC

Gene TMED1, Length 541 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED1-204ENST00000588289 VIRMAQ69YN4 1812 aaKnown RBP16.4■□□□□ 0.22
TMED1-204ENST00000588289 MAP3K5Q99683 1374 aa16.4■□□□□ 0.22
TMED1-204ENST00000588289 GNAT3A8MTJ3 354 aa16.4■□□□□ 0.22
TMED1-204ENST00000588289 TATP17735 454 aaPredicted RBP16.4■□□□□ 0.22
TMED1-204ENST00000588289 EVA1CP58658 441 aa16.4■□□□□ 0.22
TMED1-204ENST00000588289 ZNF428Q96B54 188 aa16.4■□□□□ 0.22
TMED1-204ENST00000588289 CHMP4AQ9BY43 222 aa16.39■□□□□ 0.21
TMED1-204ENST00000588289 NBPF6Q5VWK0 638 aa16.38■□□□□ 0.21
TMED1-204ENST00000588289 PELP1Q8IZL8 1130 aaKnown RBP16.38■□□□□ 0.21
TMED1-204ENST00000588289 NBPF4Q96M43 638 aa16.38■□□□□ 0.21
TMED1-204ENST00000588289 SPG7Q9UQ90 795 aa16.38■□□□□ 0.21
TMED1-204ENST00000588289 WDR17Q8IZU2 1322 aa16.38■□□□□ 0.21
TMED1-204ENST00000588289 CANXP27824 592 aaKnown RBP16.37■□□□□ 0.21
TMED1-204ENST00000588289 FKBP8Q14318 412 aa16.37■□□□□ 0.21
TMED1-204ENST00000588289 CFAP44Q96MT7 982 aa16.37■□□□□ 0.21
TMED1-204ENST00000588289 BABAM1Q9NWV8 329 aa16.37■□□□□ 0.21
TMED1-204ENST00000588289 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.37■□□□□ 0.21
TMED1-204ENST00000588289 LAS1LQ9Y4W2 734 aaKnown RBP16.37■□□□□ 0.21
TMED1-204ENST00000588289 OVOS2A0A0G2JMS6 1433 aa16.36■□□□□ 0.21
TMED1-204ENST00000588289 MS4A1P11836 297 aa16.36■□□□□ 0.21
TMED1-204ENST00000588289 CHRNA2Q15822 529 aa16.36■□□□□ 0.21
TMED1-204ENST00000588289 MTHFSDQ2M296 383 aaKnown RBP16.36■□□□□ 0.21
TMED1-204ENST00000588289 TOM1L2Q6ZVM7 507 aa16.36■□□□□ 0.21
TMED1-204ENST00000588289 FANCIQ9NVI1 1328 aa16.36■□□□□ 0.21
TMED1-204ENST00000588289 NWD2Q9ULI1 1742 aa16.36■□□□□ 0.21
TMED1-204ENST00000588289 COL5A2P05997 1499 aaPredicted RBP16.35■□□□□ 0.21
TMED1-204ENST00000588289 HSP90AB1P08238 724 aaKnown RBP16.35■□□□□ 0.21
TMED1-204ENST00000588289 RRP1P56182 461 aaKnown RBP16.35■□□□□ 0.21
TMED1-204ENST00000588289 AKAP4Q5JQC9 854 aa16.35■□□□□ 0.21
TMED1-204ENST00000588289 AXIN2Q9Y2T1 843 aa16.35■□□□□ 0.21
TMED1-204ENST00000588289 RNF123Q5XPI4 1314 aa16.35■□□□□ 0.21
TMED1-204ENST00000588289 LRRC37A3O60309 1634 aa16.34■□□□□ 0.21
TMED1-204ENST00000588289 ZNF530Q6P9A1 599 aaPredicted RBP16.34■□□□□ 0.21
TMED1-204ENST00000588289 USHBP1Q8N6Y0 703 aa16.34■□□□□ 0.21
TMED1-204ENST00000588289 CACNA1FO60840 1977 aa16.34■□□□□ 0.21
TMED1-204ENST00000588289 JCADQ9P266 1359 aa16.34■□□□□ 0.21
TMED1-204ENST00000588289 PLCH1Q4KWH8 1693 aa16.34■□□□□ 0.21
TMED1-204ENST00000588289 PKD1L3Q7Z443 1732 aa16.33■□□□□ 0.21
TMED1-204ENST00000588289 SOS1Q07889 1333 aaPredicted RBP16.33■□□□□ 0.2
TMED1-204ENST00000588289 CRB1P82279 1406 aa16.32■□□□□ 0.2
TMED1-204ENST00000588289 CARD10Q9BWT7 1032 aa16.32■□□□□ 0.2
TMED1-204ENST00000588289 TEFQ10587 303 aa16.31■□□□□ 0.2
TMED1-204ENST00000588289 SPATA31A6Q5VVP1 1343 aa16.3■□□□□ 0.2
TMED1-204ENST00000588289 KIF16BQ96L93 1317 aa16.3■□□□□ 0.2
TMED1-204ENST00000588289 ALDH1L2Q3SY69 923 aa16.3■□□□□ 0.2
TMED1-204ENST00000588289 SPINK5Q9NQ38 1064 aaPredicted RBP16.3■□□□□ 0.2
TMED1-204ENST00000588289 STRN4Q9NRL3 753 aa16.3■□□□□ 0.2
TMED1-204ENST00000588289 SCN11AQ9UI33 1791 aa16.3■□□□□ 0.2
TMED1-204ENST00000588289 IPO8O15397 1037 aaKnown RBP16.29■□□□□ 0.2
TMED1-204ENST00000588289 ZNF853P0CG23 659 aa16.29■□□□□ 0.2
TMED1-204ENST00000588289 MCM10Q7L590 875 aa16.29■□□□□ 0.2
TMED1-204ENST00000588289 TSR2Q969E8 191 aaKnown RBP16.29■□□□□ 0.2
TMED1-204ENST00000588289 CDCA7Q9BWT1 371 aaPredicted RBP16.29■□□□□ 0.2
TMED1-204ENST00000588289 TSPYL4Q9UJ04 414 aa16.29■□□□□ 0.2
TMED1-204ENST00000588289 PCDH11XQ9BZA7 1347 aa16.28■□□□□ 0.2
TMED1-204ENST00000588289 PCDH11YQ9BZA8 1340 aa16.28■□□□□ 0.2
TMED1-204ENST00000588289 IL2RBP14784 551 aa16.28■□□□□ 0.2
TMED1-204ENST00000588289 EXOSC9Q06265 439 aaKnown RBP16.28■□□□□ 0.2
TMED1-204ENST00000588289 IFNL2Q8IZJ0 200 aa16.28■□□□□ 0.2
TMED1-204ENST00000588289 MBIPQ9NS73 344 aa16.28■□□□□ 0.2
TMED1-204ENST00000588289 BTG4Q9NY30 223 aa16.28■□□□□ 0.2
TMED1-204ENST00000588289 WNK3Q9BYP7 1800 aa16.27■□□□□ 0.2
TMED1-204ENST00000588289 FAM83GA6ND36 823 aa16.27■□□□□ 0.2
TMED1-204ENST00000588289 CHL1O00533 1208 aa16.27■□□□□ 0.2
TMED1-204ENST00000588289 TAF7Q15545 349 aaPredicted RBP16.27■□□□□ 0.2
TMED1-204ENST00000588289 AAMPQ13685 434 aa16.26■□□□□ 0.19
TMED1-204ENST00000588289 THUMPD2Q9BTF0 503 aaKnown RBP16.26■□□□□ 0.19
TMED1-204ENST00000588289 SMC4Q9NTJ3 1288 aa16.26■□□□□ 0.19
TMED1-204ENST00000588289 PPP4R2Q9NY27 417 aa16.26■□□□□ 0.19
TMED1-204ENST00000588289 ADAMTS7Q9UKP4 1686 aa16.25■□□□□ 0.19
TMED1-204ENST00000588289 RARSP54136 660 aaKnown RBP16.25■□□□□ 0.19
TMED1-204ENST00000588289 DCTN1Q14203 1278 aa16.25■□□□□ 0.19
TMED1-204ENST00000588289 PDE3AQ14432 1141 aa16.25■□□□□ 0.19
TMED1-204ENST00000588289 TWISTNBQ3B726 338 aaPredicted RBP16.25■□□□□ 0.19
TMED1-204ENST00000588289 CHMP4BQ9H444 224 aaKnown RBP16.25■□□□□ 0.19
TMED1-204ENST00000588289 THRAP3Q9Y2W1 955 aaKnown RBP16.25■□□□□ 0.19
TMED1-204ENST00000588289 NRAPQ86VF7 1730 aa16.25■□□□□ 0.19
TMED1-204ENST00000588289 CEMIPQ8WUJ3 1361 aa16.25■□□□□ 0.19
TMED1-204ENST00000588289 KDM3BQ7LBC6 1761 aa16.24■□□□□ 0.19
TMED1-204ENST00000588289 DCAF5Q96JK2 942 aa16.24■□□□□ 0.19
TMED1-204ENST00000588289 MEGF6O75095 1541 aa16.24■□□□□ 0.19
TMED1-204ENST00000588289 SIPA1L3O60292 1781 aaPredicted RBP16.23■□□□□ 0.19
TMED1-204ENST00000588289 NUTM2BA6NNL0 878 aaPredicted RBP16.23■□□□□ 0.19
TMED1-204ENST00000588289 NUTM2EB1AL46 878 aaPredicted RBP16.23■□□□□ 0.19
TMED1-204ENST00000588289 ZKSCAN2Q63HK3 967 aa16.23■□□□□ 0.19
TMED1-204ENST00000588289 NUTM2AQ8IVF1 878 aaPredicted RBP16.23■□□□□ 0.19
TMED1-204ENST00000588289 FTSJ3Q8IY81 847 aaKnown RBP16.23■□□□□ 0.19
TMED1-204ENST00000588289 ZCRB1Q8TBF4 217 aaKnown RBP16.23■□□□□ 0.19
TMED1-204ENST00000588289 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.22■□□□□ 0.19
TMED1-204ENST00000588289 ADAMTS2O95450 1211 aa16.22■□□□□ 0.19
TMED1-204ENST00000588289 RNMTO43148 476 aaKnown RBP16.21■□□□□ 0.19
TMED1-204ENST00000588289 HOXB7P09629 217 aa16.21■□□□□ 0.19
TMED1-204ENST00000588289 PHKG2P15735 406 aa16.21■□□□□ 0.19
TMED1-204ENST00000588289 IRX6P78412 446 aaPredicted RBP16.21■□□□□ 0.19
TMED1-204ENST00000588289 MEX3CQ5U5Q3 659 aaKnown RBP16.21■□□□□ 0.19
TMED1-204ENST00000588289 LARP1Q6PKG0 1096 aaKnown RBP16.21■□□□□ 0.19
TMED1-204ENST00000588289 FRAT1Q92837 279 aaPredicted RBP16.21■□□□□ 0.19
TMED1-204ENST00000588289 STK31Q9BXU1 1019 aa16.21■□□□□ 0.19
TMED1-204ENST00000588289 BTBD11A6QL63 1104 aa16.2■□□□□ 0.18
TMED1-204ENST00000588289 IL17REQ8NFR9 667 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms