RNA–Protein interactions for RNA: ENST00000588009.1

TUBD1-208, Transcript of tubulin delta 1, humanhuman

TSL 3

Gene TUBD1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-208ENST00000588009 SERPINB4P48594 390 aa9.11□□□□□ -0.95
TUBD1-208ENST00000588009 CCDC102BQ68D86 513 aa9.11□□□□□ -0.95
TUBD1-208ENST00000588009 PCDHGA11Q9Y5H2 935 aa9.11□□□□□ -0.95
TUBD1-208ENST00000588009 ESPNB1AK53 854 aa9.1□□□□□ -0.95
TUBD1-208ENST00000588009 TPCN2Q8NHX9 752 aa9.1□□□□□ -0.95
TUBD1-208ENST00000588009 SIRT1Q96EB6 747 aa9.1□□□□□ -0.95
TUBD1-208ENST00000588009 SLC10A4Q96EP9 437 aa9.1□□□□□ -0.95
TUBD1-208ENST00000588009 PRMT3O60678 531 aa9.09□□□□□ -0.95
TUBD1-208ENST00000588009 USP4Q13107 963 aa9.09□□□□□ -0.95
TUBD1-208ENST00000588009 C1QTNF2Q9BXJ5 285 aa9.09□□□□□ -0.95
TUBD1-208ENST00000588009 SFI1A8K8P3 1242 aa9.08□□□□□ -0.96
TUBD1-208ENST00000588009 NRG2O14511 850 aaPredicted RBP9.08□□□□□ -0.96
TUBD1-208ENST00000588009 S1PR4O95977 384 aa9.08□□□□□ -0.96
TUBD1-208ENST00000588009 ERCC3P19447 782 aa9.08□□□□□ -0.96
TUBD1-208ENST00000588009 OCLNQ16625 522 aa9.08□□□□□ -0.96
TUBD1-208ENST00000588009 NBPF20Q3BBV1 942 aa9.08□□□□□ -0.96
TUBD1-208ENST00000588009 DNAJC14Q6Y2X3 702 aaPredicted RBP9.08□□□□□ -0.96
TUBD1-208ENST00000588009 TAS1R3Q7RTX0 852 aa9.08□□□□□ -0.96
TUBD1-208ENST00000588009 CCDC125Q86Z20 511 aa9.08□□□□□ -0.96
TUBD1-208ENST00000588009 PRIMPOLQ96LW4 560 aa9.08□□□□□ -0.96
TUBD1-208ENST00000588009 CXXC1Q9P0U4 656 aaPredicted RBP9.08□□□□□ -0.96
TUBD1-208ENST00000588009 FCF1Q9Y324 198 aaKnown RBP9.08□□□□□ -0.96
TUBD1-208ENST00000588009 PCDHB11Q9Y5F2 797 aa9.08□□□□□ -0.96
TUBD1-208ENST00000588009 RBM47A0AV96 593 aaKnown RBP9.07□□□□□ -0.96
TUBD1-208ENST00000588009 PSME1Q06323 249 aa9.07□□□□□ -0.96
TUBD1-208ENST00000588009 SEPT12Q8IYM1 358 aa9.07□□□□□ -0.96
TUBD1-208ENST00000588009 NKX2-3Q8TAU0 364 aa9.07□□□□□ -0.96
TUBD1-208ENST00000588009 CDV3Q9UKY7 258 aaKnown RBP9.07□□□□□ -0.96
TUBD1-208ENST00000588009 SH3BP2P78314 561 aa9.06□□□□□ -0.96
TUBD1-208ENST00000588009 TRMT44Q8IYL2 757 aaKnown RBP9.06□□□□□ -0.96
TUBD1-208ENST00000588009 MARSP56192 900 aaKnown RBP9.04□□□□□ -0.96
TUBD1-208ENST00000588009 NOM1Q5C9Z4 860 aaKnown RBP9.04□□□□□ -0.96
TUBD1-208ENST00000588009 HINFPQ9BQA5 517 aa9.04□□□□□ -0.96
TUBD1-208ENST00000588009 BIN2Q9UBW5 565 aaPredicted RBP9.04□□□□□ -0.96
TUBD1-208ENST00000588009 EGFL7Q9UHF1 273 aa9.04□□□□□ -0.96
TUBD1-208ENST00000588009 UNCXA6NJT0 531 aa9.03□□□□□ -0.96
TUBD1-208ENST00000588009 LGR5O75473 907 aa9.02□□□□□ -0.97
TUBD1-208ENST00000588009 ABL1P00519 1130 aa9.02□□□□□ -0.97
TUBD1-208ENST00000588009 KCTD15Q96SI1 283 aaPredicted RBP9.02□□□□□ -0.97
TUBD1-208ENST00000588009 M0R2N6 131 aa9.01□□□□□ -0.97
TUBD1-208ENST00000588009 MYCP01106 439 aaPredicted RBP9.01□□□□□ -0.97
TUBD1-208ENST00000588009 RAB15P59190 212 aa9.01□□□□□ -0.97
TUBD1-208ENST00000588009 PDZRN3Q9UPQ7 1066 aa9.01□□□□□ -0.97
TUBD1-208ENST00000588009 ICMTO60725 284 aa9□□□□□ -0.97
TUBD1-208ENST00000588009 WEE1P30291 646 aa9□□□□□ -0.97
TUBD1-208ENST00000588009 TSEN2Q8NCE0 465 aaKnown RBP9□□□□□ -0.97
TUBD1-208ENST00000588009 PPEF1O14829 653 aaPredicted RBP8.99□□□□□ -0.97
TUBD1-208ENST00000588009 ZBTB24O43167 697 aaPredicted RBP8.99□□□□□ -0.97
TUBD1-208ENST00000588009 VARSP26640 1264 aaKnown RBP8.99□□□□□ -0.97
TUBD1-208ENST00000588009 ZNF211Q13398 564 aaPredicted RBP8.99□□□□□ -0.97
TUBD1-208ENST00000588009 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.99□□□□□ -0.97
TUBD1-208ENST00000588009 GTF3C2Q8WUA4 911 aaPredicted RBP8.99□□□□□ -0.97
TUBD1-208ENST00000588009 ANO2Q9NQ90 1003 aa8.99□□□□□ -0.97
TUBD1-208ENST00000588009 SEPT3Q9UH03 358 aa8.99□□□□□ -0.97
TUBD1-208ENST00000588009 H3BRB1 525 aa8.98□□□□□ -0.97
TUBD1-208ENST00000588009 SCTRP47872 440 aa8.98□□□□□ -0.97
TUBD1-208ENST00000588009 ANKLE1Q8NAG6 615 aa8.98□□□□□ -0.97
TUBD1-208ENST00000588009 TUT1Q9H6E5 874 aaKnown RBP8.98□□□□□ -0.97
TUBD1-208ENST00000588009 ANKRD33BA6NCL7 494 aa8.97□□□□□ -0.97
TUBD1-208ENST00000588009 ERVH48-1M5A8F1 160 aa8.97□□□□□ -0.97
TUBD1-208ENST00000588009 SLC19A1P41440 591 aa8.97□□□□□ -0.97
TUBD1-208ENST00000588009 INTS6LQ5JSJ4 861 aaKnown RBP8.97□□□□□ -0.97
TUBD1-208ENST00000588009 VASH1Q7L8A9 365 aaPredicted RBP8.97□□□□□ -0.97
TUBD1-208ENST00000588009 GLYCTKQ8IVS8 523 aa8.97□□□□□ -0.97
TUBD1-208ENST00000588009 MKNK1Q9BUB5 465 aa8.97□□□□□ -0.97
TUBD1-208ENST00000588009 BCL2L13Q9BXK5 485 aa8.97□□□□□ -0.97
TUBD1-208ENST00000588009 ZNF358Q9NW07 568 aa8.97□□□□□ -0.97
TUBD1-208ENST00000588009 MAP4K5Q9Y4K4 846 aa8.97□□□□□ -0.97
TUBD1-208ENST00000588009 RNF223E7ERA6 249 aa8.96□□□□□ -0.98
TUBD1-208ENST00000588009 PTCD1O75127 700 aaKnown RBP8.96□□□□□ -0.98
TUBD1-208ENST00000588009 ZNF16P17020 682 aaPredicted RBP8.96□□□□□ -0.98
TUBD1-208ENST00000588009 SKOR1P84550 965 aa8.96□□□□□ -0.98
TUBD1-208ENST00000588009 FKBP4Q02790 459 aaKnown RBP eCLIP8.96□□□□□ -0.98
TUBD1-208ENST00000588009 TRIM32Q13049 653 aa8.96□□□□□ -0.98
TUBD1-208ENST00000588009 FKBP5Q13451 457 aaPredicted RBP8.96□□□□□ -0.98
TUBD1-208ENST00000588009 CAPN12Q6ZSI9 719 aa8.96□□□□□ -0.98
TUBD1-208ENST00000588009 PURBQ96QR8 312 aaKnown RBP8.96□□□□□ -0.98
TUBD1-208ENST00000588009 DNMT3AQ9Y6K1 912 aaPredicted RBP8.96□□□□□ -0.98
TUBD1-208ENST00000588009 TMEM229AB2RXF0 380 aa8.95□□□□□ -0.98
TUBD1-208ENST00000588009 C21orf2O43822 256 aa8.95□□□□□ -0.98
TUBD1-208ENST00000588009 WNT7BP56706 349 aa8.95□□□□□ -0.98
TUBD1-208ENST00000588009 ERVK-9P63128 1117 aa8.95□□□□□ -0.98
TUBD1-208ENST00000588009 ECM1Q16610 540 aa8.95□□□□□ -0.98
TUBD1-208ENST00000588009 NPAS4Q8IUM7 802 aa8.95□□□□□ -0.98
TUBD1-208ENST00000588009 ESF1Q9H501 851 aaKnown RBP8.95□□□□□ -0.98
TUBD1-208ENST00000588009 KIAA1522Q9P206 1035 aaPredicted RBP8.95□□□□□ -0.98
TUBD1-208ENST00000588009 IGFBP4P22692 258 aa8.94□□□□□ -0.98
TUBD1-208ENST00000588009 SF3B2Q13435 895 aaKnown RBP8.94□□□□□ -0.98
TUBD1-208ENST00000588009 CC2D2BQ6DHV5 1058 aa8.94□□□□□ -0.98
TUBD1-208ENST00000588009 COL26A1Q96A83 441 aa8.94□□□□□ -0.98
TUBD1-208ENST00000588009 PLA2G2CQ5R387 149 aa8.93□□□□□ -0.98
TUBD1-208ENST00000588009 GAS2L2Q8NHY3 880 aa8.93□□□□□ -0.98
TUBD1-208ENST00000588009 GIPC2Q8TF65 315 aa8.93□□□□□ -0.98
TUBD1-208ENST00000588009 MRRFQ96E11 262 aaKnown RBP8.93□□□□□ -0.98
TUBD1-208ENST00000588009 OSBPL3Q9H4L5 887 aa8.93□□□□□ -0.98
TUBD1-208ENST00000588009 ARHGAP4P98171 946 aa8.92□□□□□ -0.98
TUBD1-208ENST00000588009 MTMR3Q13615 1198 aa8.92□□□□□ -0.98
TUBD1-208ENST00000588009 ZNF598Q86UK7 904 aaKnown RBP8.92□□□□□ -0.98
TUBD1-208ENST00000588009 IGSF5Q9NSI5 407 aa8.92□□□□□ -0.98
TUBD1-208ENST00000588009 WASLO00401 505 aaPredicted RBP8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms