RNA–Protein interactions for RNA: ENST00000587470.1

VMP1-205, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-205ENST00000587470 ERVK-9P63128 1117 aa9.4□□□□□ -0.9
VMP1-205ENST00000587470 CC2D2BQ6DHV5 1058 aa9.4□□□□□ -0.9
VMP1-205ENST00000587470 POLMQ9NP87 494 aaPredicted RBP9.4□□□□□ -0.9
VMP1-205ENST00000587470 SENP3-EIF4A1A0A087X0R7 540 aa9.39□□□□□ -0.91
VMP1-205ENST00000587470 ATP5J2-PTCD1G3V325 749 aa9.39□□□□□ -0.91
VMP1-205ENST00000587470 RNFT1Q5M7Z0 435 aa9.39□□□□□ -0.91
VMP1-205ENST00000587470 PCDHB11Q9Y5F2 797 aa9.39□□□□□ -0.91
VMP1-205ENST00000587470 ABL2P42684 1182 aa9.38□□□□□ -0.91
VMP1-205ENST00000587470 WASHC4Q2M389 1173 aa9.38□□□□□ -0.91
VMP1-205ENST00000587470 RNF217Q8TC41 542 aa9.38□□□□□ -0.91
VMP1-205ENST00000587470 VAC14Q08AM6 782 aa9.37□□□□□ -0.91
VMP1-205ENST00000587470 KCNMA1Q12791 1236 aa9.37□□□□□ -0.91
VMP1-205ENST00000587470 CNTNAP3BQ96NU0 1288 aa9.37□□□□□ -0.91
VMP1-205ENST00000587470 COL25A1Q9BXS0 654 aaPredicted RBP9.37□□□□□ -0.91
VMP1-205ENST00000587470 CNTNAP3Q9BZ76 1288 aa9.37□□□□□ -0.91
VMP1-205ENST00000587470 ESF1Q9H501 851 aaKnown RBP9.37□□□□□ -0.91
VMP1-205ENST00000587470 FOXD4L5Q5VV16 416 aaPredicted RBP9.36□□□□□ -0.91
VMP1-205ENST00000587470 SCTRP47872 440 aa9.35□□□□□ -0.91
VMP1-205ENST00000587470 RNF144AP50876 292 aaPredicted RBP9.35□□□□□ -0.91
VMP1-205ENST00000587470 CYP2U1Q7Z449 544 aa9.35□□□□□ -0.91
VMP1-205ENST00000587470 TRAK2O60296 914 aa9.34□□□□□ -0.91
VMP1-205ENST00000587470 ITGA6P23229 1130 aa9.34□□□□□ -0.91
VMP1-205ENST00000587470 TMEM132AQ24JP5 1023 aa9.34□□□□□ -0.91
VMP1-205ENST00000587470 SLFNL1Q499Z3 407 aa9.34□□□□□ -0.91
VMP1-205ENST00000587470 PHTF2Q8N3S3 785 aa9.34□□□□□ -0.91
VMP1-205ENST00000587470 CCDC85AQ96PX6 553 aaPredicted RBP9.34□□□□□ -0.91
VMP1-205ENST00000587470 COG6Q9Y2V7 657 aa9.34□□□□□ -0.91
VMP1-205ENST00000587470 LOC100996750A0A140TA64 210 aa9.33□□□□□ -0.92
VMP1-205ENST00000587470 A0A1W2PRU2 124 aa9.33□□□□□ -0.92
VMP1-205ENST00000587470 MEN1O00255 615 aa9.33□□□□□ -0.92
VMP1-205ENST00000587470 SLURP2P0DP57 97 aa9.33□□□□□ -0.92
VMP1-205ENST00000587470 FLIIQ13045 1269 aa9.33□□□□□ -0.92
VMP1-205ENST00000587470 ZNF385CQ66K41 422 aaPredicted RBP9.33□□□□□ -0.92
VMP1-205ENST00000587470 LYSMD3Q7Z3D4 306 aa9.33□□□□□ -0.92
VMP1-205ENST00000587470 KRTAP4-6Q9BYQ5 205 aa9.33□□□□□ -0.92
VMP1-205ENST00000587470 OSBPL3Q9H4L5 887 aa9.33□□□□□ -0.92
VMP1-205ENST00000587470 GPC1P35052 558 aa9.32□□□□□ -0.92
VMP1-205ENST00000587470 SOX11P35716 441 aa9.32□□□□□ -0.92
VMP1-205ENST00000587470 WHAMMQ8TF30 809 aa9.32□□□□□ -0.92
VMP1-205ENST00000587470 CDCA7Q9BWT1 371 aaPredicted RBP9.32□□□□□ -0.92
VMP1-205ENST00000587470 MYCP01106 439 aaPredicted RBP9.31□□□□□ -0.92
VMP1-205ENST00000587470 SEMA3FQ13275 785 aa9.31□□□□□ -0.92
VMP1-205ENST00000587470 CLN3Q13286 438 aa9.31□□□□□ -0.92
VMP1-205ENST00000587470 VWA5B2Q8N398 1253 aa9.31□□□□□ -0.92
VMP1-205ENST00000587470 NLRP3Q96P20 1036 aa9.31□□□□□ -0.92
VMP1-205ENST00000587470 ARHGEF15O94989 841 aa9.3□□□□□ -0.92
VMP1-205ENST00000587470 USP4Q13107 963 aa9.3□□□□□ -0.92
VMP1-205ENST00000587470 TSGA10IPQ3SY00 556 aa9.3□□□□□ -0.92
VMP1-205ENST00000587470 RNF135Q8IUD6 432 aa9.3□□□□□ -0.92
VMP1-205ENST00000587470 WWC1Q8IX03 1113 aa9.3□□□□□ -0.92
VMP1-205ENST00000587470 CUEDC1Q9NWM3 386 aaPredicted RBP9.3□□□□□ -0.92
VMP1-205ENST00000587470 ADAMTS8Q9UP79 889 aa9.3□□□□□ -0.92
VMP1-205ENST00000587470 RAD21O60216 631 aa9.29□□□□□ -0.92
VMP1-205ENST00000587470 GNRH1P01148 92 aa9.29□□□□□ -0.92
VMP1-205ENST00000587470 PRICKLE2Q7Z3G6 844 aa9.29□□□□□ -0.92
VMP1-205ENST00000587470 CHIC2Q9UKJ5 165 aa9.29□□□□□ -0.92
VMP1-205ENST00000587470 DOLKQ9UPQ8 538 aa9.29□□□□□ -0.92
VMP1-205ENST00000587470 ARHGEF10LQ9HCE6 1279 aa9.28□□□□□ -0.92
VMP1-205ENST00000587470 GAS6Q14393 721 aa9.27□□□□□ -0.93
VMP1-205ENST00000587470 SLC27A3Q5K4L6 730 aa9.27□□□□□ -0.93
VMP1-205ENST00000587470 SIRT1Q96EB6 747 aa9.27□□□□□ -0.93
VMP1-205ENST00000587470 GRIP2Q9C0E4 1043 aa9.27□□□□□ -0.93
VMP1-205ENST00000587470 UBTFP17480 764 aaKnown RBP9.26□□□□□ -0.93
VMP1-205ENST00000587470 MAP7D1Q3KQU3 841 aa9.26□□□□□ -0.93
VMP1-205ENST00000587470 SV2AQ7L0J3 742 aa9.26□□□□□ -0.93
VMP1-205ENST00000587470 POM121Q96HA1 1249 aa9.26□□□□□ -0.93
VMP1-205ENST00000587470 ESYT1Q9BSJ8 1104 aa9.26□□□□□ -0.93
VMP1-205ENST00000587470 RHOQP17081 205 aa9.25□□□□□ -0.93
VMP1-205ENST00000587470 KCTD17Q8N5Z5 321 aa9.25□□□□□ -0.93
VMP1-205ENST00000587470 CNKSR1Q969H4 720 aa9.25□□□□□ -0.93
VMP1-205ENST00000587470 RAB6BQ9NRW1 208 aa9.25□□□□□ -0.93
VMP1-205ENST00000587470 CDC14CA4D256 554 aa9.24□□□□□ -0.93
VMP1-205ENST00000587470 RASSF7Q02833 373 aa9.24□□□□□ -0.93
VMP1-205ENST00000587470 OXLD1Q5BKU9 147 aa9.24□□□□□ -0.93
VMP1-205ENST00000587470 CENPCQ03188 943 aa9.23□□□□□ -0.93
VMP1-205ENST00000587470 POU4F2Q12837 409 aa9.23□□□□□ -0.93
VMP1-205ENST00000587470 ESCO1Q5FWF5 840 aa9.23□□□□□ -0.93
VMP1-205ENST00000587470 WDR44Q5JSH3 913 aa9.23□□□□□ -0.93
VMP1-205ENST00000587470 PLPP7Q8NBV4 271 aa9.23□□□□□ -0.93
VMP1-205ENST00000587470 XAGE2Q96GT9 111 aa9.23□□□□□ -0.93
VMP1-205ENST00000587470 ALG2Q9H553 416 aa9.23□□□□□ -0.93
VMP1-205ENST00000587470 SPATA31C2B4DYI2 1134 aa9.22□□□□□ -0.93
VMP1-205ENST00000587470 IL2RAP01589 272 aa9.22□□□□□ -0.93
VMP1-205ENST00000587470 NBPF10Q6P3W6 841 aaKnown RBP9.21□□□□□ -0.94
VMP1-205ENST00000587470 SVOPQ8N4V2 548 aa9.21□□□□□ -0.94
VMP1-205ENST00000587470 NBPF15Q8N660 670 aa9.21□□□□□ -0.94
VMP1-205ENST00000587470 DYRK1BQ9Y463 629 aa9.21□□□□□ -0.94
VMP1-205ENST00000587470 HRH3Q9Y5N1 445 aa9.21□□□□□ -0.94
VMP1-205ENST00000587470 ADAMTS2O95450 1211 aa9.2□□□□□ -0.94
VMP1-205ENST00000587470 LYPD4Q6UWN0 246 aa9.2□□□□□ -0.94
VMP1-205ENST00000587470 TAS1R3Q7RTX0 852 aa9.2□□□□□ -0.94
VMP1-205ENST00000587470 TMEM151AQ8N4L1 468 aa9.2□□□□□ -0.94
VMP1-205ENST00000587470 ZNF837Q96EG3 531 aaPredicted RBP9.2□□□□□ -0.94
VMP1-205ENST00000587470 GMCL1Q96IK5 515 aa9.2□□□□□ -0.94
VMP1-205ENST00000587470 GDF11O95390 407 aa9.19□□□□□ -0.94
VMP1-205ENST00000587470 SUZ12Q15022 739 aaKnown RBP9.19□□□□□ -0.94
VMP1-205ENST00000587470 ZSCAN10Q96SZ4 725 aaPredicted RBP9.19□□□□□ -0.94
VMP1-205ENST00000587470 PIK3CDO00329 1044 aa9.18□□□□□ -0.94
VMP1-205ENST00000587470 WASLO00401 505 aaPredicted RBP9.18□□□□□ -0.94
VMP1-205ENST00000587470 LZTS3O60299 673 aaPredicted RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms