RNA–Protein interactions for RNA: ENST00000587275.1

U2AF2-204, Transcript of U2 small nuclear RNA auxiliary factor 2, humanhuman

TSL 4

Gene U2AF2, Length 554 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF2-204ENST00000587275 MAP2P11137 1827 aaKnown RBP28.25■■■□□ 2.11
U2AF2-204ENST00000587275 AMPHP49418 695 aa28.24■■■□□ 2.11
U2AF2-204ENST00000587275 ITGB4P16144 1822 aa28.23■■■□□ 2.11
U2AF2-204ENST00000587275 PKD1L3Q7Z443 1732 aa28.23■■■□□ 2.11
U2AF2-204ENST00000587275 SLC24A1O60721 1099 aa28.22■■■□□ 2.11
U2AF2-204ENST00000587275 NBPF6Q5VWK0 638 aa28.22■■■□□ 2.11
U2AF2-204ENST00000587275 NBPF4Q96M43 638 aa28.22■■■□□ 2.11
U2AF2-204ENST00000587275 TAF1LQ8IZX4 1826 aa28.22■■■□□ 2.11
U2AF2-204ENST00000587275 USHBP1Q8N6Y0 703 aa28.21■■■□□ 2.11
U2AF2-204ENST00000587275 CARD14Q9BXL6 1004 aa28.2■■■□□ 2.1
U2AF2-204ENST00000587275 KCNQ4P56696 695 aa28.18■■■□□ 2.1
U2AF2-204ENST00000587275 MTFR1LQ9H019 292 aa28.18■■■□□ 2.1
U2AF2-204ENST00000587275 C5P01031 1676 aa28.18■■■□□ 2.1
U2AF2-204ENST00000587275 NSD3Q9BZ95 1437 aa28.18■■■□□ 2.1
U2AF2-204ENST00000587275 PRIM1P49642 420 aaKnown RBP28.17■■■□□ 2.1
U2AF2-204ENST00000587275 AKT1S1Q96B36 256 aa28.17■■■□□ 2.1
U2AF2-204ENST00000587275 CHD4Q14839 1912 aa28.17■■■□□ 2.1
U2AF2-204ENST00000587275 HSP90AB2PQ58FF8 381 aa28.16■■■□□ 2.1
U2AF2-204ENST00000587275 ZCRB1Q8TBF4 217 aaKnown RBP28.16■■■□□ 2.1
U2AF2-204ENST00000587275 INSRP06213 1382 aa28.15■■■□□ 2.1
U2AF2-204ENST00000587275 YY1P25490 414 aa28.15■■■□□ 2.1
U2AF2-204ENST00000587275 FHDC1Q9C0D6 1143 aaPredicted RBP28.15■■■□□ 2.1
U2AF2-204ENST00000587275 FLT4P35916 1363 aa28.13■■■□□ 2.09
U2AF2-204ENST00000587275 SYTL4Q96C24 671 aaPredicted RBP28.13■■■□□ 2.09
U2AF2-204ENST00000587275 SMG6Q86US8 1419 aaKnown RBP28.12■■■□□ 2.09
U2AF2-204ENST00000587275 SYT17Q9BSW7 474 aa28.12■■■□□ 2.09
U2AF2-204ENST00000587275 PNPLA7Q6ZV29 1317 aa28.12■■■□□ 2.09
U2AF2-204ENST00000587275 NCAPD2Q15021 1401 aa28.11■■■□□ 2.09
U2AF2-204ENST00000587275 GOLGB1Q14789 3259 aaKnown RBP28.1■■■□□ 2.09
U2AF2-204ENST00000587275 SLC27A3Q5K4L6 730 aa28.1■■■□□ 2.09
U2AF2-204ENST00000587275 EMILIN1Q9Y6C2 1016 aa28.1■■■□□ 2.09
U2AF2-204ENST00000587275 KIF24Q5T7B8 1368 aa28.1■■■□□ 2.09
U2AF2-204ENST00000587275 CDCA8Q53HL2 280 aa28.07■■■□□ 2.08
U2AF2-204ENST00000587275 CGNL1Q0VF96 1302 aa28.05■■■□□ 2.08
U2AF2-204ENST00000587275 ARXQ96QS3 562 aa28.05■■■□□ 2.08
U2AF2-204ENST00000587275 MAP3K5Q99683 1374 aa28.05■■■□□ 2.08
U2AF2-204ENST00000587275 UBR3Q6ZT12 1888 aa28.04■■■□□ 2.08
U2AF2-204ENST00000587275 RAPGEF4Q8WZA2 1011 aa28.03■■■□□ 2.08
U2AF2-204ENST00000587275 CYP27B1O15528 508 aa28.02■■■□□ 2.08
U2AF2-204ENST00000587275 TIMELESSQ9UNS1 1208 aa28.02■■■□□ 2.08
U2AF2-204ENST00000587275 C4BP0C0L5 1744 aa28.01■■■□□ 2.07
U2AF2-204ENST00000587275 TATP17735 454 aaPredicted RBP28.01■■■□□ 2.07
U2AF2-204ENST00000587275 PCDH11XQ9BZA7 1347 aa28■■■□□ 2.07
U2AF2-204ENST00000587275 PCDH11YQ9BZA8 1340 aa28■■■□□ 2.07
U2AF2-204ENST00000587275 CCNL1Q9UK58 526 aaPredicted RBP28■■■□□ 2.07
U2AF2-204ENST00000587275 CLSPNQ9HAW4 1339 aa27.99■■■□□ 2.07
U2AF2-204ENST00000587275 PCGF6Q9BYE7 350 aa27.99■■■□□ 2.07
U2AF2-204ENST00000587275 DCAF8L1A6NGE4 600 aa27.98■■■□□ 2.07
U2AF2-204ENST00000587275 TFCP2L1Q9NZI6 479 aa27.98■■■□□ 2.07
U2AF2-204ENST00000587275 SLC16A10Q8TF71 515 aa27.97■■■□□ 2.07
U2AF2-204ENST00000587275 WASHC2AQ641Q2 1341 aa27.94■■■□□ 2.06
U2AF2-204ENST00000587275 COL23A1Q86Y22 540 aaPredicted RBP27.94■■■□□ 2.06
U2AF2-204ENST00000587275 PALLDQ8WX93 1383 aa27.94■■■□□ 2.06
U2AF2-204ENST00000587275 PPM1GO15355 546 aaPredicted RBP27.93■■■□□ 2.06
U2AF2-204ENST00000587275 POLKQ9UBT6 870 aa27.93■■■□□ 2.06
U2AF2-204ENST00000587275 EYA1Q99502 592 aa27.92■■■□□ 2.06
U2AF2-204ENST00000587275 MPRIPQ6WCQ1 1025 aa27.91■■■□□ 2.06
U2AF2-204ENST00000587275 AMIGO3Q86WK7 504 aa27.9■■■□□ 2.06
U2AF2-204ENST00000587275 NLGN2Q8NFZ4 835 aa27.9■■■□□ 2.06
U2AF2-204ENST00000587275 HSPA5P11021 654 aaKnown RBP27.88■■■□□ 2.05
U2AF2-204ENST00000587275 KLHL34Q8N239 644 aa27.88■■■□□ 2.05
U2AF2-204ENST00000587275 POLR3GLQ9BT43 218 aa27.88■■■□□ 2.05
U2AF2-204ENST00000587275 NKX1-1Q15270 411 aaPredicted RBP27.87■■■□□ 2.05
U2AF2-204ENST00000587275 ZNF784Q8NCA9 323 aaPredicted RBP27.87■■■□□ 2.05
U2AF2-204ENST00000587275 POLD1P28340 1107 aa27.86■■■□□ 2.05
U2AF2-204ENST00000587275 PIGBQ92521 554 aa27.86■■■□□ 2.05
U2AF2-204ENST00000587275 TNNT2P45379 298 aaPredicted RBP27.85■■■□□ 2.05
U2AF2-204ENST00000587275 EIF4A2Q14240 407 aaKnown RBP27.85■■■□□ 2.05
U2AF2-204ENST00000587275 MSL1Q68DK7 614 aa27.85■■■□□ 2.05
U2AF2-204ENST00000587275 COL5A3P25940 1745 aaPredicted RBP27.84■■■□□ 2.05
U2AF2-204ENST00000587275 SMIM5Q71RC9 77 aa27.84■■■□□ 2.05
U2AF2-204ENST00000587275 VIRMAQ69YN4 1812 aaKnown RBP27.83■■■□□ 2.05
U2AF2-204ENST00000587275 MSH5O43196 834 aa27.81■■■□□ 2.04
U2AF2-204ENST00000587275 ZNF831Q5JPB2 1677 aa27.81■■■□□ 2.04
U2AF2-204ENST00000587275 PANK3Q9H999 370 aa27.8■■■□□ 2.04
U2AF2-204ENST00000587275 SPG7Q9UQ90 795 aa27.8■■■□□ 2.04
U2AF2-204ENST00000587275 IGSF1Q8N6C5 1336 aa27.79■■■□□ 2.04
U2AF2-204ENST00000587275 PHKG2P15735 406 aa27.79■■■□□ 2.04
U2AF2-204ENST00000587275 EIF4G2P78344 907 aaKnown RBP eCLIP27.79■■■□□ 2.04
U2AF2-204ENST00000587275 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.79■■■□□ 2.04
U2AF2-204ENST00000587275 GPR162Q16538 588 aa27.78■■■□□ 2.04
U2AF2-204ENST00000587275 LINC00116Q8NCU8 138 aa27.77■■■□□ 2.04
U2AF2-204ENST00000587275 YBX3P16989 372 aaKnown RBP eCLIP27.76■■■□□ 2.03
U2AF2-204ENST00000587275 SMARCC1Q92922 1105 aaPredicted RBP27.76■■■□□ 2.03
U2AF2-204ENST00000587275 ASAP1Q9ULH1 1129 aa27.76■■■□□ 2.03
U2AF2-204ENST00000587275 MYH14Q7Z406 1995 aaKnown RBP27.76■■■□□ 2.03
U2AF2-204ENST00000587275 KIAA1551Q9HCM1 1747 aa27.75■■■□□ 2.03
U2AF2-204ENST00000587275 ITPK1Q13572 414 aa27.75■■■□□ 2.03
U2AF2-204ENST00000587275 SCN11AQ9UI33 1791 aa27.75■■■□□ 2.03
U2AF2-204ENST00000587275 C4AP0C0L4 1744 aa27.75■■■□□ 2.03
U2AF2-204ENST00000587275 KDRP35968 1356 aa27.74■■■□□ 2.03
U2AF2-204ENST00000587275 LOC102724428A0A0B4J2F2 783 aa27.74■■■□□ 2.03
U2AF2-204ENST00000587275 SIK1P57059 783 aa27.74■■■□□ 2.03
U2AF2-204ENST00000587275 KDM6AO15550 1401 aaPredicted RBP27.74■■■□□ 2.03
U2AF2-204ENST00000587275 PLEKHG2Q9H7P9 1386 aa27.73■■■□□ 2.03
U2AF2-204ENST00000587275 IFNL2Q8IZJ0 200 aa27.73■■■□□ 2.03
U2AF2-204ENST00000587275 PELP1Q8IZL8 1130 aaKnown RBP27.73■■■□□ 2.03
U2AF2-204ENST00000587275 KIF13BQ9NQT8 1826 aa27.73■■■□□ 2.03
U2AF2-204ENST00000587275 TMOD3Q9NYL9 352 aa27.72■■■□□ 2.03
U2AF2-204ENST00000587275 PHF14O94880 888 aa27.71■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms