RNA–Protein interactions for RNA: ENST00000586900.1

PKN1-208, Transcript of protein kinase N1, humanhuman

TSL 3

Gene PKN1, Length 550 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKN1-208ENST00000586900 U2SURPO15042 1029 aaKnown RBP16.5■□□□□ 0.23
PKN1-208ENST00000586900 AEBP1Q8IUX7 1158 aa16.49■□□□□ 0.23
PKN1-208ENST00000586900 ZCRB1Q8TBF4 217 aaKnown RBP16.49■□□□□ 0.23
PKN1-208ENST00000586900 PKD1L3Q7Z443 1732 aa16.48■□□□□ 0.23
PKN1-208ENST00000586900 FCHSD2O94868 740 aa16.47■□□□□ 0.23
PKN1-208ENST00000586900 AMOTQ4VCS5 1084 aa16.47■□□□□ 0.23
PKN1-208ENST00000586900 DIEXFQ68CQ4 756 aaKnown RBP16.47■□□□□ 0.23
PKN1-208ENST00000586900 SPG7Q9UQ90 795 aa16.47■□□□□ 0.23
PKN1-208ENST00000586900 BCL9O00512 1426 aa16.46■□□□□ 0.23
PKN1-208ENST00000586900 SHANK3Q9BYB0 1731 aa16.46■□□□□ 0.23
PKN1-208ENST00000586900 HMOX1P09601 288 aa16.46■□□□□ 0.23
PKN1-208ENST00000586900 U2AF1L5P0DN76 240 aaPredicted RBP16.46■□□□□ 0.23
PKN1-208ENST00000586900 U2AF1Q01081 240 aaKnown RBP eCLIP16.46■□□□□ 0.23
PKN1-208ENST00000586900 PLEKHO1Q53GL0 409 aaPredicted RBP16.46■□□□□ 0.23
PKN1-208ENST00000586900 MARCH10Q8NA82 808 aaPredicted RBP16.46■□□□□ 0.23
PKN1-208ENST00000586900 FAM196AQ6ZSG2 479 aa16.45■□□□□ 0.22
PKN1-208ENST00000586900 PCDH11XQ9BZA7 1347 aa16.45■□□□□ 0.22
PKN1-208ENST00000586900 PCDH11YQ9BZA8 1340 aa16.45■□□□□ 0.22
PKN1-208ENST00000586900 RSPH6AQ9H0K4 717 aa16.44■□□□□ 0.22
PKN1-208ENST00000586900 DDX54Q8TDD1 881 aaKnown RBP16.43■□□□□ 0.22
PKN1-208ENST00000586900 PNNQ9H307 717 aaKnown RBP16.43■□□□□ 0.22
PKN1-208ENST00000586900 CYP27B1O15528 508 aa16.42■□□□□ 0.22
PKN1-208ENST00000586900 PRKAR2BP31323 418 aa16.41■□□□□ 0.22
PKN1-208ENST00000586900 WDR43Q15061 677 aaKnown RBP eCLIP16.41■□□□□ 0.22
PKN1-208ENST00000586900 NKX1-1Q15270 411 aaPredicted RBP16.41■□□□□ 0.22
PKN1-208ENST00000586900 IFNL2Q8IZJ0 200 aa16.41■□□□□ 0.22
PKN1-208ENST00000586900 PHKG2P15735 406 aa16.4■□□□□ 0.22
PKN1-208ENST00000586900 CCDC184Q52MB2 194 aa16.4■□□□□ 0.22
PKN1-208ENST00000586900 FAM182BQ5T319 152 aa16.4■□□□□ 0.22
PKN1-208ENST00000586900 MRS2Q9HD23 443 aa16.4■□□□□ 0.22
PKN1-208ENST00000586900 CCDC125Q86Z20 511 aa16.39■□□□□ 0.21
PKN1-208ENST00000586900 SBF2Q86WG5 1849 aa16.39■□□□□ 0.21
PKN1-208ENST00000586900 CCER2I3L3R5 266 aa16.38■□□□□ 0.21
PKN1-208ENST00000586900 NEFMP07197 916 aa16.38■□□□□ 0.21
PKN1-208ENST00000586900 HSP90AB1P08238 724 aaKnown RBP16.38■□□□□ 0.21
PKN1-208ENST00000586900 ZNF530Q6P9A1 599 aaPredicted RBP16.38■□□□□ 0.21
PKN1-208ENST00000586900 GAS2L2Q8NHY3 880 aa16.38■□□□□ 0.21
PKN1-208ENST00000586900 PNISRQ8TF01 805 aaKnown RBP16.38■□□□□ 0.21
PKN1-208ENST00000586900 PLEKHF1Q96S99 279 aa16.38■□□□□ 0.21
PKN1-208ENST00000586900 MTHFSDQ2M296 383 aaKnown RBP16.37■□□□□ 0.21
PKN1-208ENST00000586900 AKAP4Q5JQC9 854 aa16.37■□□□□ 0.21
PKN1-208ENST00000586900 C1orf141Q5JVX7 400 aa16.37■□□□□ 0.21
PKN1-208ENST00000586900 PHACTR3Q96KR7 559 aa16.37■□□□□ 0.21
PKN1-208ENST00000586900 ADAMTS8Q9UP79 889 aa16.37■□□□□ 0.21
PKN1-208ENST00000586900 UPF1Q92900 1129 aaKnown RBP eCLIP16.36■□□□□ 0.21
PKN1-208ENST00000586900 KAT6BQ8WYB5 2073 aa16.35■□□□□ 0.21
PKN1-208ENST00000586900 SOCS7O14512 581 aa16.35■□□□□ 0.21
PKN1-208ENST00000586900 DCAF5Q96JK2 942 aa16.35■□□□□ 0.21
PKN1-208ENST00000586900 BCL11BQ9C0K0 894 aaPredicted RBP16.35■□□□□ 0.21
PKN1-208ENST00000586900 NHSQ6T4R5 1651 aa16.34■□□□□ 0.21
PKN1-208ENST00000586900 RUNDC1Q96C34 613 aa16.34■□□□□ 0.21
PKN1-208ENST00000586900 EP400Q96L91 3159 aa16.33■□□□□ 0.21
PKN1-208ENST00000586900 TRIM37O94972 964 aa16.33■□□□□ 0.2
PKN1-208ENST00000586900 MAPK8IP3Q9UPT6 1336 aa16.33■□□□□ 0.2
PKN1-208ENST00000586900 DOT1LQ8TEK3 1739 aa16.33■□□□□ 0.2
PKN1-208ENST00000586900 GNAT3A8MTJ3 354 aa16.32■□□□□ 0.2
PKN1-208ENST00000586900 ERVV-2B6SEH9 535 aa16.32■□□□□ 0.2
PKN1-208ENST00000586900 HTATSF1O43719 755 aaKnown RBP16.32■□□□□ 0.2
PKN1-208ENST00000586900 MIER1Q8N108 512 aa16.32■□□□□ 0.2
PKN1-208ENST00000586900 ACSBG1Q96GR2 724 aa16.32■□□□□ 0.2
PKN1-208ENST00000586900 TNS1Q9HBL0 1735 aaKnown RBP16.32■□□□□ 0.2
PKN1-208ENST00000586900 ADAMTS7Q9UKP4 1686 aa16.32■□□□□ 0.2
PKN1-208ENST00000586900 SCN11AQ9UI33 1791 aa16.31■□□□□ 0.2
PKN1-208ENST00000586900 TOGARAM1Q9Y4F4 1720 aa16.31■□□□□ 0.2
PKN1-208ENST00000586900 KDM6AO15550 1401 aaPredicted RBP16.31■□□□□ 0.2
PKN1-208ENST00000586900 MAP3K5Q99683 1374 aa16.31■□□□□ 0.2
PKN1-208ENST00000586900 KCNQ2O43526 872 aa16.31■□□□□ 0.2
PKN1-208ENST00000586900 PRIM1P49642 420 aaKnown RBP16.31■□□□□ 0.2
PKN1-208ENST00000586900 SF3B2Q13435 895 aaKnown RBP16.31■□□□□ 0.2
PKN1-208ENST00000586900 NFE2L2Q16236 605 aa16.31■□□□□ 0.2
PKN1-208ENST00000586900 ITGB4P16144 1822 aa16.31■□□□□ 0.2
PKN1-208ENST00000586900 MPRIPQ6WCQ1 1025 aa16.3■□□□□ 0.2
PKN1-208ENST00000586900 VIRMAQ69YN4 1812 aaKnown RBP16.29■□□□□ 0.2
PKN1-208ENST00000586900 RNMTO43148 476 aaKnown RBP16.29■□□□□ 0.2
PKN1-208ENST00000586900 DLG5Q8TDM6 1919 aa16.29■□□□□ 0.2
PKN1-208ENST00000586900 PLSCR1O15162 318 aa16.28■□□□□ 0.2
PKN1-208ENST00000586900 TMPOP42166 694 aaKnown RBP16.28■□□□□ 0.2
PKN1-208ENST00000586900 BAG6P46379 1132 aa16.28■□□□□ 0.2
PKN1-208ENST00000586900 PTF1AQ7RTS3 328 aa16.28■□□□□ 0.2
PKN1-208ENST00000586900 CCDC146Q8IYE0 955 aa16.28■□□□□ 0.2
PKN1-208ENST00000586900 SYTL4Q96C24 671 aaPredicted RBP16.28■□□□□ 0.2
PKN1-208ENST00000586900 BTAF1O14981 1849 aa16.28■□□□□ 0.2
PKN1-208ENST00000586900 APBA3O96018 575 aa16.27■□□□□ 0.2
PKN1-208ENST00000586900 IL17REQ8NFR9 667 aa16.27■□□□□ 0.2
PKN1-208ENST00000586900 RTF1Q92541 710 aaKnown RBP16.27■□□□□ 0.2
PKN1-208ENST00000586900 LGR6Q9HBX8 967 aa16.27■□□□□ 0.2
PKN1-208ENST00000586900 TMOD3Q9NYL9 352 aa16.27■□□□□ 0.2
PKN1-208ENST00000586900 CEMIPQ8WUJ3 1361 aa16.26■□□□□ 0.19
PKN1-208ENST00000586900 RGPD3A6NKT7 1758 aaPredicted RBP16.26■□□□□ 0.19
PKN1-208ENST00000586900 RGPD4Q7Z3J3 1758 aa16.26■□□□□ 0.19
PKN1-208ENST00000586900 CABP4P57796 275 aa16.26■□□□□ 0.19
PKN1-208ENST00000586900 FAM9BQ8IZU0 186 aa16.26■□□□□ 0.19
PKN1-208ENST00000586900 PIGBQ92521 554 aa16.26■□□□□ 0.19
PKN1-208ENST00000586900 MRC1P22897 1456 aa16.26■□□□□ 0.19
PKN1-208ENST00000586900 RIPK4P57078 832 aa16.25■□□□□ 0.19
PKN1-208ENST00000586900 LMOD3Q0VAK6 560 aa16.25■□□□□ 0.19
PKN1-208ENST00000586900 NCBP3Q53F19 620 aaKnown RBP16.25■□□□□ 0.19
PKN1-208ENST00000586900 SLC52A2Q9HAB3 445 aa16.25■□□□□ 0.19
PKN1-208ENST00000586900 NFATC2IPQ8NCF5 419 aa16.24■□□□□ 0.19
PKN1-208ENST00000586900 SMARCC1Q92922 1105 aaPredicted RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms