RNA–Protein interactions for RNA: ENST00000586638.5

APOC1-201, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-201ENST00000586638 RGPD2P0DJD1 1756 aa13.37□□□□□ -0.27
APOC1-201ENST00000586638 AMPHP49418 695 aa13.37□□□□□ -0.27
APOC1-201ENST00000586638 IFFO2Q5TF58 517 aa13.37□□□□□ -0.27
APOC1-201ENST00000586638 LARP1Q6PKG0 1096 aaKnown RBP13.37□□□□□ -0.27
APOC1-201ENST00000586638 RGPD5Q99666 1765 aa13.37□□□□□ -0.27
APOC1-201ENST00000586638 USP19O94966 1318 aa13.37□□□□□ -0.27
APOC1-201ENST00000586638 IRX6P78412 446 aaPredicted RBP13.36□□□□□ -0.27
APOC1-201ENST00000586638 GOLGA2Q08379 1002 aa13.36□□□□□ -0.27
APOC1-201ENST00000586638 FKBP8Q14318 412 aa13.36□□□□□ -0.27
APOC1-201ENST00000586638 WWC1Q8IX03 1113 aa13.35□□□□□ -0.27
APOC1-201ENST00000586638 NGEFQ8N5V2 710 aa13.35□□□□□ -0.27
APOC1-201ENST00000586638 SPINK5Q9NQ38 1064 aaPredicted RBP13.35□□□□□ -0.27
APOC1-201ENST00000586638 THRAP3Q9Y2W1 955 aaKnown RBP13.35□□□□□ -0.27
APOC1-201ENST00000586638 THSD7AQ9UPZ6 1657 aa13.34□□□□□ -0.27
APOC1-201ENST00000586638 KIF24Q5T7B8 1368 aa13.34□□□□□ -0.27
APOC1-201ENST00000586638 ZBTB7CA1YPR0 619 aa13.34□□□□□ -0.27
APOC1-201ENST00000586638 FCHSD2O94868 740 aa13.34□□□□□ -0.27
APOC1-201ENST00000586638 GCP02774 474 aa13.34□□□□□ -0.27
APOC1-201ENST00000586638 HOXC9P31274 260 aa13.34□□□□□ -0.27
APOC1-201ENST00000586638 TMPOP42166 694 aaKnown RBP13.34□□□□□ -0.27
APOC1-201ENST00000586638 DUSP27Q5VZP5 1158 aa13.34□□□□□ -0.27
APOC1-201ENST00000586638 AEBP1Q8IUX7 1158 aa13.34□□□□□ -0.27
APOC1-201ENST00000586638 CAMTA1Q9Y6Y1 1673 aa13.34□□□□□ -0.27
APOC1-201ENST00000586638 SLFN5Q08AF3 891 aa13.33□□□□□ -0.28
APOC1-201ENST00000586638 DCAF8L1A6NGE4 600 aa13.32□□□□□ -0.28
APOC1-201ENST00000586638 YY1P25490 414 aa13.32□□□□□ -0.28
APOC1-201ENST00000586638 CCDC27Q2M243 656 aa13.32□□□□□ -0.28
APOC1-201ENST00000586638 PNNQ9H307 717 aaKnown RBP13.32□□□□□ -0.28
APOC1-201ENST00000586638 SPON1Q9HCB6 807 aa13.32□□□□□ -0.28
APOC1-201ENST00000586638 PPP1R1BQ9UD71 204 aaPredicted RBP13.32□□□□□ -0.28
APOC1-201ENST00000586638 CPDO75976 1380 aa13.32□□□□□ -0.28
APOC1-201ENST00000586638 COL18A1P39060 1754 aa13.31□□□□□ -0.28
APOC1-201ENST00000586638 E9PSI1 815 aa13.31□□□□□ -0.28
APOC1-201ENST00000586638 KCNQ2O43526 872 aa13.31□□□□□ -0.28
APOC1-201ENST00000586638 SULT6B1Q6IMI4 303 aa13.31□□□□□ -0.28
APOC1-201ENST00000586638 KCNH5Q8NCM2 988 aa13.31□□□□□ -0.28
APOC1-201ENST00000586638 PHACTR3Q96KR7 559 aa13.31□□□□□ -0.28
APOC1-201ENST00000586638 RCAN3Q9UKA8 241 aa13.31□□□□□ -0.28
APOC1-201ENST00000586638 IGSF1Q8N6C5 1336 aa13.31□□□□□ -0.28
APOC1-201ENST00000586638 NEFMP07197 916 aa13.3□□□□□ -0.28
APOC1-201ENST00000586638 NFE2L2Q16236 605 aa13.3□□□□□ -0.28
APOC1-201ENST00000586638 TRMT2AQ8IZ69 625 aaKnown RBP13.3□□□□□ -0.28
APOC1-201ENST00000586638 LTV1Q96GA3 475 aaPredicted RBP13.3□□□□□ -0.28
APOC1-201ENST00000586638 TRIM35Q9UPQ4 493 aa13.3□□□□□ -0.28
APOC1-201ENST00000586638 RNF123Q5XPI4 1314 aa13.3□□□□□ -0.28
APOC1-201ENST00000586638 RIPK4P57078 832 aa13.29□□□□□ -0.28
APOC1-201ENST00000586638 NCBP3Q53F19 620 aaKnown RBP13.29□□□□□ -0.28
APOC1-201ENST00000586638 LMO7Q8WWI1 1683 aa13.28□□□□□ -0.28
APOC1-201ENST00000586638 TNS1Q9HBL0 1735 aaKnown RBP13.28□□□□□ -0.28
APOC1-201ENST00000586638 PLSCR1O15162 318 aa13.28□□□□□ -0.28
APOC1-201ENST00000586638 RRP1P56182 461 aaKnown RBP13.28□□□□□ -0.28
APOC1-201ENST00000586638 WDR63Q8IWG1 891 aa13.28□□□□□ -0.28
APOC1-201ENST00000586638 IP6K1Q92551 441 aa13.28□□□□□ -0.28
APOC1-201ENST00000586638 EYA1Q99502 592 aa13.28□□□□□ -0.28
APOC1-201ENST00000586638 KDRP35968 1356 aa13.28□□□□□ -0.28
APOC1-201ENST00000586638 ABCC6O95255 1503 aa13.28□□□□□ -0.28
APOC1-201ENST00000586638 LRRC37A3O60309 1634 aa13.28□□□□□ -0.28
APOC1-201ENST00000586638 FAM208AQ9UK61 1670 aaKnown RBP13.28□□□□□ -0.28
APOC1-201ENST00000586638 DDB1Q16531 1140 aa13.27□□□□□ -0.29
APOC1-201ENST00000586638 ARHGEF25Q86VW2 580 aa13.27□□□□□ -0.29
APOC1-201ENST00000586638 TOM1L2Q6ZVM7 507 aa13.26□□□□□ -0.29
APOC1-201ENST00000586638 USHBP1Q8N6Y0 703 aa13.26□□□□□ -0.29
APOC1-201ENST00000586638 BCL11BQ9C0K0 894 aaPredicted RBP13.26□□□□□ -0.29
APOC1-201ENST00000586638 CRB1P82279 1406 aa13.25□□□□□ -0.29
APOC1-201ENST00000586638 FANCIQ9NVI1 1328 aa13.25□□□□□ -0.29
APOC1-201ENST00000586638 THUMPD2Q9BTF0 503 aaKnown RBP13.25□□□□□ -0.29
APOC1-201ENST00000586638 VIRMAQ69YN4 1812 aaKnown RBP13.25□□□□□ -0.29
APOC1-201ENST00000586638 MYH16Q9H6N6 1097 aa13.24□□□□□ -0.29
APOC1-201ENST00000586638 COL5A2P05997 1499 aaPredicted RBP13.23□□□□□ -0.29
APOC1-201ENST00000586638 NCAPD2Q15021 1401 aa13.23□□□□□ -0.29
APOC1-201ENST00000586638 IL16Q14005 1332 aa13.23□□□□□ -0.29
APOC1-201ENST00000586638 ANKRD24Q8TF21 1146 aa13.23□□□□□ -0.29
APOC1-201ENST00000586638 TSR2Q969E8 191 aaKnown RBP13.23□□□□□ -0.29
APOC1-201ENST00000586638 CDCA7Q9BWT1 371 aaPredicted RBP13.23□□□□□ -0.29
APOC1-201ENST00000586638 AXIN2Q9Y2T1 843 aa13.23□□□□□ -0.29
APOC1-201ENST00000586638 OVOS2A0A0G2JMS6 1433 aa13.22□□□□□ -0.29
APOC1-201ENST00000586638 LMOD3Q0VAK6 560 aa13.22□□□□□ -0.29
APOC1-201ENST00000586638 PTF1AQ7RTS3 328 aa13.22□□□□□ -0.29
APOC1-201ENST00000586638 PROM2Q8N271 834 aa13.22□□□□□ -0.29
APOC1-201ENST00000586638 MARCH10Q8NA82 808 aaPredicted RBP13.22□□□□□ -0.29
APOC1-201ENST00000586638 EXOC5O00471 708 aa13.21□□□□□ -0.29
APOC1-201ENST00000586638 PLIN1O60240 522 aa13.21□□□□□ -0.29
APOC1-201ENST00000586638 DCTN1Q14203 1278 aa13.21□□□□□ -0.29
APOC1-201ENST00000586638 WDR17Q8IZU2 1322 aa13.2□□□□□ -0.3
APOC1-201ENST00000586638 ZBTB7AO95365 584 aa13.2□□□□□ -0.3
APOC1-201ENST00000586638 CSB-PGBD3P0DP91 1061 aa13.2□□□□□ -0.3
APOC1-201ENST00000586638 MTHFSDQ2M296 383 aaKnown RBP13.2□□□□□ -0.3
APOC1-201ENST00000586638 NBPF6Q5VWK0 638 aa13.2□□□□□ -0.3
APOC1-201ENST00000586638 NBPF4Q96M43 638 aa13.2□□□□□ -0.3
APOC1-201ENST00000586638 CARD10Q9BWT7 1032 aa13.2□□□□□ -0.3
APOC1-201ENST00000586638 ANO8Q9HCE9 1232 aaPredicted RBP13.2□□□□□ -0.3
APOC1-201ENST00000586638 ERBB3P21860 1342 aa13.19□□□□□ -0.3
APOC1-201ENST00000586638 PDGFDQ9GZP0 370 aaPredicted RBP13.19□□□□□ -0.3
APOC1-201ENST00000586638 STK32BQ9NY57 414 aa13.19□□□□□ -0.3
APOC1-201ENST00000586638 ATF5Q9Y2D1 282 aaPredicted RBP13.19□□□□□ -0.3
APOC1-201ENST00000586638 LAS1LQ9Y4W2 734 aaKnown RBP13.19□□□□□ -0.3
APOC1-201ENST00000586638 RREB1Q92766 1687 aa13.18□□□□□ -0.3
APOC1-201ENST00000586638 CALD1Q05682 793 aaKnown RBP13.18□□□□□ -0.3
APOC1-201ENST00000586638 EXOSC9Q06265 439 aaKnown RBP13.18□□□□□ -0.3
APOC1-201ENST00000586638 TXNRD1Q16881 649 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms