RNA–Protein interactions for RNA: ENST00000586177.1

AP3D1-204, Transcript of adaptor related protein complex 3 subunit delta 1, humanhuman

TSL 5

Gene AP3D1, Length 627 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1-204ENST00000586177 OVOS2A0A0G2JMS6 1433 aa22.85■■□□□ 1.25
AP3D1-204ENST00000586177 TNS2Q63HR2 1409 aa22.85■■□□□ 1.25
AP3D1-204ENST00000586177 HMOX1P09601 288 aa22.85■■□□□ 1.25
AP3D1-204ENST00000586177 UPF1Q92900 1129 aaKnown RBP eCLIP22.85■■□□□ 1.25
AP3D1-204ENST00000586177 SPG7Q9UQ90 795 aa22.84■■□□□ 1.25
AP3D1-204ENST00000586177 LRRC37A3O60309 1634 aa22.83■■□□□ 1.25
AP3D1-204ENST00000586177 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.83■■□□□ 1.25
AP3D1-204ENST00000586177 WNK3Q9BYP7 1800 aa22.82■■□□□ 1.24
AP3D1-204ENST00000586177 KDRP35968 1356 aa22.81■■□□□ 1.24
AP3D1-204ENST00000586177 U2AF1L5P0DN76 240 aaPredicted RBP22.81■■□□□ 1.24
AP3D1-204ENST00000586177 U2AF1Q01081 240 aaKnown RBP eCLIP22.81■■□□□ 1.24
AP3D1-204ENST00000586177 PLEKHO1Q53GL0 409 aaPredicted RBP22.81■■□□□ 1.24
AP3D1-204ENST00000586177 CCDC125Q86Z20 511 aa22.8■■□□□ 1.24
AP3D1-204ENST00000586177 AMOTQ4VCS5 1084 aa22.79■■□□□ 1.24
AP3D1-204ENST00000586177 PCDH11XQ9BZA7 1347 aa22.79■■□□□ 1.24
AP3D1-204ENST00000586177 PCDH11YQ9BZA8 1340 aa22.79■■□□□ 1.24
AP3D1-204ENST00000586177 TRIM37O94972 964 aa22.78■■□□□ 1.24
AP3D1-204ENST00000586177 RGPD1P0DJD0 1748 aa22.77■■□□□ 1.24
AP3D1-204ENST00000586177 CYP27B1O15528 508 aa22.77■■□□□ 1.24
AP3D1-204ENST00000586177 SF3B2Q13435 895 aaKnown RBP22.77■■□□□ 1.24
AP3D1-204ENST00000586177 PLEKHG2Q9H7P9 1386 aa22.76■■□□□ 1.23
AP3D1-204ENST00000586177 FCHSD2O94868 740 aa22.75■■□□□ 1.23
AP3D1-204ENST00000586177 IFNL2Q8IZJ0 200 aa22.75■■□□□ 1.23
AP3D1-204ENST00000586177 ACSBG1Q96GR2 724 aa22.75■■□□□ 1.23
AP3D1-204ENST00000586177 BCL9O00512 1426 aa22.74■■□□□ 1.23
AP3D1-204ENST00000586177 ZNF530Q6P9A1 599 aaPredicted RBP22.74■■□□□ 1.23
AP3D1-204ENST00000586177 RSPH6AQ9H0K4 717 aa22.74■■□□□ 1.23
AP3D1-204ENST00000586177 PHKG2P15735 406 aa22.73■■□□□ 1.23
AP3D1-204ENST00000586177 PRKAR2BP31323 418 aa22.73■■□□□ 1.23
AP3D1-204ENST00000586177 BCL11BQ9C0K0 894 aaPredicted RBP22.72■■□□□ 1.23
AP3D1-204ENST00000586177 KCNQ2O43526 872 aa22.71■■□□□ 1.23
AP3D1-204ENST00000586177 NKX1-1Q15270 411 aaPredicted RBP22.71■■□□□ 1.23
AP3D1-204ENST00000586177 C1orf141Q5JVX7 400 aa22.71■■□□□ 1.23
AP3D1-204ENST00000586177 APBA3O96018 575 aa22.7■■□□□ 1.22
AP3D1-204ENST00000586177 MTHFSDQ2M296 383 aaKnown RBP22.7■■□□□ 1.22
AP3D1-204ENST00000586177 PTF1AQ7RTS3 328 aa22.7■■□□□ 1.22
AP3D1-204ENST00000586177 HSP90AB1P08238 724 aaKnown RBP22.69■■□□□ 1.22
AP3D1-204ENST00000586177 PRIM1P49642 420 aaKnown RBP22.69■■□□□ 1.22
AP3D1-204ENST00000586177 WDR43Q15061 677 aaKnown RBP eCLIP22.69■■□□□ 1.22
AP3D1-204ENST00000586177 SYTL4Q96C24 671 aaPredicted RBP22.69■■□□□ 1.22
AP3D1-204ENST00000586177 PHACTR3Q96KR7 559 aa22.69■■□□□ 1.22
AP3D1-204ENST00000586177 PNNQ9H307 717 aaKnown RBP22.69■■□□□ 1.22
AP3D1-204ENST00000586177 EP400Q96L91 3159 aa22.69■■□□□ 1.22
AP3D1-204ENST00000586177 CCDC184Q52MB2 194 aa22.68■■□□□ 1.22
AP3D1-204ENST00000586177 NEFMP07197 916 aa22.67■■□□□ 1.22
AP3D1-204ENST00000586177 BAG6P46379 1132 aa22.67■■□□□ 1.22
AP3D1-204ENST00000586177 AKAP4Q5JQC9 854 aa22.67■■□□□ 1.22
AP3D1-204ENST00000586177 PKD1L3Q7Z443 1732 aa22.67■■□□□ 1.22
AP3D1-204ENST00000586177 DIEXFQ68CQ4 756 aaKnown RBP22.66■■□□□ 1.22
AP3D1-204ENST00000586177 DEFB132Q7Z7B7 95 aa22.66■■□□□ 1.22
AP3D1-204ENST00000586177 GAS2L2Q8NHY3 880 aa22.66■■□□□ 1.22
AP3D1-204ENST00000586177 DCAF5Q96JK2 942 aa22.66■■□□□ 1.22
AP3D1-204ENST00000586177 SHANK3Q9BYB0 1731 aa22.65■■□□□ 1.22
AP3D1-204ENST00000586177 MRS2Q9HD23 443 aa22.65■■□□□ 1.22
AP3D1-204ENST00000586177 ADAMTS8Q9UP79 889 aa22.65■■□□□ 1.22
AP3D1-204ENST00000586177 MPRIPQ6WCQ1 1025 aa22.64■■□□□ 1.21
AP3D1-204ENST00000586177 PLEKHF1Q96S99 279 aa22.64■■□□□ 1.21
AP3D1-204ENST00000586177 EN1Q05925 392 aaPredicted RBP22.63■■□□□ 1.21
AP3D1-204ENST00000586177 ERVV-2B6SEH9 535 aa22.61■■□□□ 1.21
AP3D1-204ENST00000586177 MAPK8IP3Q9UPT6 1336 aa22.6■■□□□ 1.21
AP3D1-204ENST00000586177 GNAT3A8MTJ3 354 aa22.6■■□□□ 1.21
AP3D1-204ENST00000586177 PLSCR1O15162 318 aa22.6■■□□□ 1.21
AP3D1-204ENST00000586177 CABP4P57796 275 aa22.59■■□□□ 1.21
AP3D1-204ENST00000586177 EZH2Q15910 746 aaKnown RBP22.59■■□□□ 1.21
AP3D1-204ENST00000586177 PNISRQ8TF01 805 aaKnown RBP22.59■■□□□ 1.21
AP3D1-204ENST00000586177 CAMKK2Q96RR4 588 aa22.59■■□□□ 1.21
AP3D1-204ENST00000586177 LGR6Q9HBX8 967 aa22.59■■□□□ 1.21
AP3D1-204ENST00000586177 TMOD3Q9NYL9 352 aa22.59■■□□□ 1.21
AP3D1-204ENST00000586177 RNMTO43148 476 aaKnown RBP22.58■■□□□ 1.21
AP3D1-204ENST00000586177 CCDC146Q8IYE0 955 aa22.58■■□□□ 1.21
AP3D1-204ENST00000586177 PIGBQ92521 554 aa22.58■■□□□ 1.21
AP3D1-204ENST00000586177 SBF2Q86WG5 1849 aa22.58■■□□□ 1.21
AP3D1-204ENST00000586177 RUNDC1Q96C34 613 aa22.57■■□□□ 1.2
AP3D1-204ENST00000586177 MAP3K5Q99683 1374 aa22.57■■□□□ 1.2
AP3D1-204ENST00000586177 KDM6AO15550 1401 aaPredicted RBP22.57■■□□□ 1.2
AP3D1-204ENST00000586177 KAT6BQ8WYB5 2073 aa22.56■■□□□ 1.2
AP3D1-204ENST00000586177 NHSQ6T4R5 1651 aa22.55■■□□□ 1.2
AP3D1-204ENST00000586177 NFE2L2Q16236 605 aa22.55■■□□□ 1.2
AP3D1-204ENST00000586177 NFATC2IPQ8NCF5 419 aa22.55■■□□□ 1.2
AP3D1-204ENST00000586177 IL17REQ8NFR9 667 aa22.55■■□□□ 1.2
AP3D1-204ENST00000586177 RTF1Q92541 710 aaKnown RBP22.55■■□□□ 1.2
AP3D1-204ENST00000586177 TNS1Q9HBL0 1735 aaKnown RBP22.54■■□□□ 1.2
AP3D1-204ENST00000586177 DOT1LQ8TEK3 1739 aa22.54■■□□□ 1.2
AP3D1-204ENST00000586177 HTATSF1O43719 755 aaKnown RBP22.53■■□□□ 1.2
AP3D1-204ENST00000586177 TXNRD1Q16881 649 aa22.52■■□□□ 1.2
AP3D1-204ENST00000586177 PROM2Q8N271 834 aa22.52■■□□□ 1.2
AP3D1-204ENST00000586177 SMARCC1Q92922 1105 aaPredicted RBP22.52■■□□□ 1.2
AP3D1-204ENST00000586177 SLC52A2Q9HAB3 445 aa22.52■■□□□ 1.2
AP3D1-204ENST00000586177 TMPOP42166 694 aaKnown RBP22.51■■□□□ 1.19
AP3D1-204ENST00000586177 ASAP1Q9ULH1 1129 aa22.51■■□□□ 1.19
AP3D1-204ENST00000586177 CCER2I3L3R5 266 aa22.5■■□□□ 1.19
AP3D1-204ENST00000586177 RIPK4P57078 832 aa22.5■■□□□ 1.19
AP3D1-204ENST00000586177 TEFQ10587 303 aa22.5■■□□□ 1.19
AP3D1-204ENST00000586177 MCM10Q7L590 875 aa22.5■■□□□ 1.19
AP3D1-204ENST00000586177 TOGARAM1Q9Y4F4 1720 aa22.49■■□□□ 1.19
AP3D1-204ENST00000586177 DCTN1Q14203 1278 aa22.49■■□□□ 1.19
AP3D1-204ENST00000586177 NEUROD2Q15784 382 aa22.49■■□□□ 1.19
AP3D1-204ENST00000586177 FAM9BQ8IZU0 186 aa22.49■■□□□ 1.19
AP3D1-204ENST00000586177 MIER1Q8N108 512 aa22.49■■□□□ 1.19
AP3D1-204ENST00000586177 ATG3Q9NT62 314 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms