RNA–Protein interactions for RNA: ENST00000585856.2

PTBP1-206, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 2

Gene PTBP1, Length 1,217 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-206ENST00000585856 ZCRB1Q8TBF4 217 aaKnown RBP37.13■■■■□ 3.53
PTBP1-206ENST00000585856 FHDC1Q9C0D6 1143 aaPredicted RBP37.13■■■■□ 3.53
PTBP1-206ENST00000585856 SYT17Q9BSW7 474 aa37.12■■■■□ 3.53
PTBP1-206ENST00000585856 GGNBP2Q9H3C7 697 aa37.12■■■■□ 3.53
PTBP1-206ENST00000585856 CGNL1Q0VF96 1302 aa37.11■■■■□ 3.53
PTBP1-206ENST00000585856 RRS1Q15050 365 aaKnown RBP37.11■■■■□ 3.53
PTBP1-206ENST00000585856 SYTL4Q96C24 671 aaPredicted RBP37.11■■■■□ 3.53
PTBP1-206ENST00000585856 PRIM1P49642 420 aaKnown RBP37.08■■■■□ 3.53
PTBP1-206ENST00000585856 AKT1S1Q96B36 256 aa37.08■■■■□ 3.53
PTBP1-206ENST00000585856 KIF24Q5T7B8 1368 aa37.07■■■■□ 3.53
PTBP1-206ENST00000585856 SLC16A10Q8TF71 515 aa37.07■■■■□ 3.52
PTBP1-206ENST00000585856 ARXQ96QS3 562 aa37.07■■■■□ 3.52
PTBP1-206ENST00000585856 TUBGCP6Q96RT7 1819 aa37.07■■■■□ 3.52
PTBP1-206ENST00000585856 COL24A1Q17RW2 1714 aa37.06■■■■□ 3.52
PTBP1-206ENST00000585856 NBPF6Q5VWK0 638 aa37.06■■■■□ 3.52
PTBP1-206ENST00000585856 NBPF4Q96M43 638 aa37.06■■■■□ 3.52
PTBP1-206ENST00000585856 NSD2O96028 1365 aa37.05■■■■□ 3.52
PTBP1-206ENST00000585856 MAP3K5Q99683 1374 aa37.05■■■■□ 3.52
PTBP1-206ENST00000585856 INSRP06213 1382 aa37.04■■■■□ 3.52
PTBP1-206ENST00000585856 RAPGEF4Q8WZA2 1011 aa37.04■■■■□ 3.52
PTBP1-206ENST00000585856 CHD4Q14839 1912 aa37.04■■■■□ 3.52
PTBP1-206ENST00000585856 FLT4P35916 1363 aa37.04■■■■□ 3.52
PTBP1-206ENST00000585856 TIMELESSQ9UNS1 1208 aa37■■■■□ 3.51
PTBP1-206ENST00000585856 TATP17735 454 aaPredicted RBP36.98■■■■□ 3.51
PTBP1-206ENST00000585856 USHBP1Q8N6Y0 703 aa36.98■■■■□ 3.51
PTBP1-206ENST00000585856 TFCP2L1Q9NZI6 479 aa36.98■■■■□ 3.51
PTBP1-206ENST00000585856 PNPLA7Q6ZV29 1317 aa36.98■■■■□ 3.51
PTBP1-206ENST00000585856 HSP90AB2PQ58FF8 381 aa36.97■■■■□ 3.51
PTBP1-206ENST00000585856 PCDH11XQ9BZA7 1347 aa36.95■■■■□ 3.51
PTBP1-206ENST00000585856 PCDH11YQ9BZA8 1340 aa36.95■■■■□ 3.51
PTBP1-206ENST00000585856 POLD1P28340 1107 aa36.95■■■■□ 3.51
PTBP1-206ENST00000585856 ANKRD26Q9UPS8 1709 aa36.94■■■■□ 3.5
PTBP1-206ENST00000585856 CCNL1Q9UK58 526 aaPredicted RBP36.94■■■■□ 3.5
PTBP1-206ENST00000585856 NSD3Q9BZ95 1437 aa36.93■■■■□ 3.5
PTBP1-206ENST00000585856 KCNQ4P56696 695 aa36.93■■■■□ 3.5
PTBP1-206ENST00000585856 HMGB2P26583 209 aaKnown RBP36.91■■■■□ 3.5
PTBP1-206ENST00000585856 CARD14Q9BXL6 1004 aa36.91■■■■□ 3.5
PTBP1-206ENST00000585856 PKD1L3Q7Z443 1732 aa36.9■■■■□ 3.5
PTBP1-206ENST00000585856 C5P01031 1676 aa36.9■■■■□ 3.5
PTBP1-206ENST00000585856 CLSPNQ9HAW4 1339 aa36.88■■■■□ 3.49
PTBP1-206ENST00000585856 MAP2P11137 1827 aaKnown RBP36.88■■■■□ 3.49
PTBP1-206ENST00000585856 ITGB4P16144 1822 aa36.87■■■■□ 3.49
PTBP1-206ENST00000585856 TAF1LQ8IZX4 1826 aa36.87■■■■□ 3.49
PTBP1-206ENST00000585856 UTRNP46939 3433 aa36.87■■■■□ 3.49
PTBP1-206ENST00000585856 EMILIN1Q9Y6C2 1016 aa36.85■■■■□ 3.49
PTBP1-206ENST00000585856 TOGARAM1Q9Y4F4 1720 aa36.84■■■■□ 3.49
PTBP1-206ENST00000585856 NCAPD2Q15021 1401 aa36.84■■■■□ 3.49
PTBP1-206ENST00000585856 ZNF784Q8NCA9 323 aaPredicted RBP36.81■■■■□ 3.48
PTBP1-206ENST00000585856 CYP27B1O15528 508 aa36.8■■■■□ 3.48
PTBP1-206ENST00000585856 KLHL34Q8N239 644 aa36.8■■■■□ 3.48
PTBP1-206ENST00000585856 PALLDQ8WX93 1383 aa36.78■■■■□ 3.48
PTBP1-206ENST00000585856 GPR162Q16538 588 aa36.78■■■■□ 3.48
PTBP1-206ENST00000585856 WASHC2AQ641Q2 1341 aa36.78■■■■□ 3.48
PTBP1-206ENST00000585856 PPM1GO15355 546 aaPredicted RBP36.77■■■■□ 3.48
PTBP1-206ENST00000585856 MPRIPQ6WCQ1 1025 aa36.77■■■■□ 3.48
PTBP1-206ENST00000585856 MSH5O43196 834 aa36.76■■■■□ 3.48
PTBP1-206ENST00000585856 COL23A1Q86Y22 540 aaPredicted RBP36.76■■■■□ 3.48
PTBP1-206ENST00000585856 SMARCC1Q92922 1105 aaPredicted RBP36.75■■■■□ 3.47
PTBP1-206ENST00000585856 FLAD1Q8NFF5 587 aa36.74■■■■□ 3.47
PTBP1-206ENST00000585856 SPG7Q9UQ90 795 aa36.74■■■■□ 3.47
PTBP1-206ENST00000585856 C4BP0C0L5 1744 aa36.73■■■■□ 3.47
PTBP1-206ENST00000585856 NKX1-1Q15270 411 aaPredicted RBP36.72■■■■□ 3.47
PTBP1-206ENST00000585856 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP36.71■■■■□ 3.47
PTBP1-206ENST00000585856 UBR3Q6ZT12 1888 aa36.67■■■■□ 3.46
PTBP1-206ENST00000585856 EYA1Q99502 592 aa36.67■■■■□ 3.46
PTBP1-206ENST00000585856 POLKQ9UBT6 870 aa36.67■■■■□ 3.46
PTBP1-206ENST00000585856 NLGN2Q8NFZ4 835 aa36.66■■■■□ 3.46
PTBP1-206ENST00000585856 PLEKHG2Q9H7P9 1386 aa36.66■■■■□ 3.46
PTBP1-206ENST00000585856 PELP1Q8IZL8 1130 aaKnown RBP36.65■■■■□ 3.46
PTBP1-206ENST00000585856 PCGF6Q9BYE7 350 aa36.65■■■■□ 3.46
PTBP1-206ENST00000585856 PIGBQ92521 554 aa36.64■■■■□ 3.46
PTBP1-206ENST00000585856 POLR3GLQ9BT43 218 aa36.63■■■■□ 3.45
PTBP1-206ENST00000585856 AK7Q96M32 723 aa36.62■■■■□ 3.45
PTBP1-206ENST00000585856 MSL1Q68DK7 614 aa36.61■■■■□ 3.45
PTBP1-206ENST00000585856 EIF4G2P78344 907 aaKnown RBP eCLIP36.59■■■■□ 3.45
PTBP1-206ENST00000585856 IFNL2Q8IZJ0 200 aa36.59■■■■□ 3.45
PTBP1-206ENST00000585856 TMOD3Q9NYL9 352 aa36.59■■■■□ 3.45
PTBP1-206ENST00000585856 GRIN3BO60391 1043 aa36.57■■■■□ 3.44
PTBP1-206ENST00000585856 EIF4A2Q14240 407 aaKnown RBP36.57■■■■□ 3.44
PTBP1-206ENST00000585856 CD2APQ9Y5K6 639 aa36.57■■■■□ 3.44
PTBP1-206ENST00000585856 GOLGB1Q14789 3259 aaKnown RBP36.57■■■■□ 3.44
PTBP1-206ENST00000585856 PHKG2P15735 406 aa36.56■■■■□ 3.44
PTBP1-206ENST00000585856 LOC102724428A0A0B4J2F2 783 aa36.55■■■■□ 3.44
PTBP1-206ENST00000585856 SIK1P57059 783 aa36.55■■■■□ 3.44
PTBP1-206ENST00000585856 TNNT2P45379 298 aaPredicted RBP36.54■■■■□ 3.44
PTBP1-206ENST00000585856 SSFA2P28290 1259 aa36.52■■■■□ 3.44
PTBP1-206ENST00000585856 YBX3P16989 372 aaKnown RBP eCLIP36.51■■■■□ 3.442e-12■□□□□ 10.1
PTBP1-206ENST00000585856 IGSF1Q8N6C5 1336 aa36.51■■■■□ 3.43
PTBP1-206ENST00000585856 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP36.5■■■■□ 3.43
PTBP1-206ENST00000585856 HSPA5P11021 654 aaKnown RBP36.5■■■■□ 3.43
PTBP1-206ENST00000585856 PANK3Q9H999 370 aa36.49■■■■□ 3.43
PTBP1-206ENST00000585856 ASAP1Q9ULH1 1129 aa36.49■■■■□ 3.43
PTBP1-206ENST00000585856 ZNF831Q5JPB2 1677 aa36.48■■■■□ 3.43
PTBP1-206ENST00000585856 PHF14O94880 888 aa36.48■■■■□ 3.43
PTBP1-206ENST00000585856 AMIGO3Q86WK7 504 aa36.48■■■■□ 3.43
PTBP1-206ENST00000585856 LINC00116Q8NCU8 138 aa36.48■■■■□ 3.43
PTBP1-206ENST00000585856 C1QTNF8P60827 252 aa36.47■■■■□ 3.43
PTBP1-206ENST00000585856 HSP90AB1P08238 724 aaKnown RBP36.45■■■■□ 3.43
PTBP1-206ENST00000585856 ATP6V1AP38606 617 aa36.45■■■■□ 3.43
PTBP1-206ENST00000585856 ATG3Q9NT62 314 aa36.44■■■■□ 3.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms