RNA–Protein interactions for RNA: ENST00000584668.5

SRSF1-207, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 3

Gene SRSF1, Length 758 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-207ENST00000584668 NME9Q86XW9 330 aa12□□□□□ -0.49
SRSF1-207ENST00000584668 CCNL1Q9UK58 526 aaPredicted RBP12□□□□□ -0.49
SRSF1-207ENST00000584668 SMG6Q86US8 1419 aaKnown RBP12□□□□□ -0.49
SRSF1-207ENST00000584668 ATP10DQ9P241 1426 aa12□□□□□ -0.49
SRSF1-207ENST00000584668 FLAD1Q8NFF5 587 aa11.99□□□□□ -0.49
SRSF1-207ENST00000584668 NLGN2Q8NFZ4 835 aa11.99□□□□□ -0.49
SRSF1-207ENST00000584668 L3MBTL2Q969R5 705 aa11.99□□□□□ -0.49
SRSF1-207ENST00000584668 NSD3Q9BZ95 1437 aa11.99□□□□□ -0.49
SRSF1-207ENST00000584668 CGNL1Q0VF96 1302 aa11.98□□□□□ -0.49
SRSF1-207ENST00000584668 IP6K1Q92551 441 aa11.98□□□□□ -0.49
SRSF1-207ENST00000584668 CD163L1Q9NR16 1453 aa11.97□□□□□ -0.49
SRSF1-207ENST00000584668 RTL1A6NKG5 1358 aa11.97□□□□□ -0.49
SRSF1-207ENST00000584668 PRIM1P49642 420 aaKnown RBP11.97□□□□□ -0.49
SRSF1-207ENST00000584668 LTV1Q96GA3 475 aaPredicted RBP11.97□□□□□ -0.49
SRSF1-207ENST00000584668 CD2APQ9Y5K6 639 aa11.97□□□□□ -0.49
SRSF1-207ENST00000584668 A0A1W2PP64 1363 aa11.96□□□□□ -0.49
SRSF1-207ENST00000584668 TAF1LQ8IZX4 1826 aa11.96□□□□□ -0.49
SRSF1-207ENST00000584668 YBX3P16989 372 aaKnown RBP eCLIP11.96□□□□□ -0.49
SRSF1-207ENST00000584668 HSPA6P17066 643 aa11.96□□□□□ -0.49
SRSF1-207ENST00000584668 AMPHP49418 695 aa11.96□□□□□ -0.49
SRSF1-207ENST00000584668 ZCRB1Q8TBF4 217 aaKnown RBP11.96□□□□□ -0.49
SRSF1-207ENST00000584668 COG3Q96JB2 828 aa11.96□□□□□ -0.49
SRSF1-207ENST00000584668 RGPD2P0DJD1 1756 aa11.95□□□□□ -0.5
SRSF1-207ENST00000584668 SLC24A1O60721 1099 aa11.95□□□□□ -0.5
SRSF1-207ENST00000584668 NSD2O96028 1365 aa11.94□□□□□ -0.5
SRSF1-207ENST00000584668 RAPGEF4Q8WZA2 1011 aa11.94□□□□□ -0.5
SRSF1-207ENST00000584668 PUS7Q96PZ0 661 aaKnown RBP11.94□□□□□ -0.5
SRSF1-207ENST00000584668 CARD11Q9BXL7 1154 aa11.94□□□□□ -0.5
SRSF1-207ENST00000584668 ADCY9O60503 1353 aa11.93□□□□□ -0.5
SRSF1-207ENST00000584668 PCDH11XQ9BZA7 1347 aa11.93□□□□□ -0.5
SRSF1-207ENST00000584668 PCDH11YQ9BZA8 1340 aa11.93□□□□□ -0.5
SRSF1-207ENST00000584668 MEGF6O75095 1541 aa11.93□□□□□ -0.5
SRSF1-207ENST00000584668 MSL1Q68DK7 614 aa11.93□□□□□ -0.5
SRSF1-207ENST00000584668 COL23A1Q86Y22 540 aaPredicted RBP11.93□□□□□ -0.5
SRSF1-207ENST00000584668 AK7Q96M32 723 aa11.93□□□□□ -0.5
SRSF1-207ENST00000584668 C4BP0C0L5 1744 aa11.93□□□□□ -0.5
SRSF1-207ENST00000584668 HOXC9P31274 260 aa11.92□□□□□ -0.5
SRSF1-207ENST00000584668 KCNQ4P56696 695 aa11.92□□□□□ -0.5
SRSF1-207ENST00000584668 TATP17735 454 aaPredicted RBP11.91□□□□□ -0.5
SRSF1-207ENST00000584668 NEUROD1Q13562 356 aa11.91□□□□□ -0.5
SRSF1-207ENST00000584668 ZNF526Q8TF50 670 aaPredicted RBP11.91□□□□□ -0.5
SRSF1-207ENST00000584668 SMARCC1Q92922 1105 aaPredicted RBP11.91□□□□□ -0.5
SRSF1-207ENST00000584668 SLC12A5Q9H2X9 1139 aa11.91□□□□□ -0.5
SRSF1-207ENST00000584668 PALLDQ8WX93 1383 aa11.91□□□□□ -0.5
SRSF1-207ENST00000584668 ITGB4P16144 1822 aa11.9□□□□□ -0.5
SRSF1-207ENST00000584668 MAP3K19Q56UN5 1328 aa11.9□□□□□ -0.5
SRSF1-207ENST00000584668 UBR3Q6ZT12 1888 aa11.9□□□□□ -0.5
SRSF1-207ENST00000584668 KIF20BQ96Q89 1820 aa11.9□□□□□ -0.5
SRSF1-207ENST00000584668 IGSF1Q8N6C5 1336 aa11.89□□□□□ -0.51
SRSF1-207ENST00000584668 APLP1P51693 650 aa11.89□□□□□ -0.51
SRSF1-207ENST00000584668 CICQ96RK0 1608 aaPredicted RBP11.89□□□□□ -0.51
SRSF1-207ENST00000584668 KIF24Q5T7B8 1368 aa11.88□□□□□ -0.51
SRSF1-207ENST00000584668 PKD1L3Q7Z443 1732 aa11.88□□□□□ -0.51
SRSF1-207ENST00000584668 SSFA2P28290 1259 aa11.87□□□□□ -0.51
SRSF1-207ENST00000584668 MPRIPQ6WCQ1 1025 aa11.87□□□□□ -0.51
SRSF1-207ENST00000584668 TOGARAM1Q9Y4F4 1720 aa11.86□□□□□ -0.51
SRSF1-207ENST00000584668 PHF14O94880 888 aa11.86□□□□□ -0.51
SRSF1-207ENST00000584668 SIN3AQ96ST3 1273 aa11.86□□□□□ -0.51
SRSF1-207ENST00000584668 FLT4P35916 1363 aa11.86□□□□□ -0.51
SRSF1-207ENST00000584668 TONSLQ96HA7 1378 aa11.86□□□□□ -0.51
SRSF1-207ENST00000584668 KIF13BQ9NQT8 1826 aa11.85□□□□□ -0.51
SRSF1-207ENST00000584668 INSRP06213 1382 aa11.84□□□□□ -0.51
SRSF1-207ENST00000584668 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.84□□□□□ -0.51
SRSF1-207ENST00000584668 NBPF6Q5VWK0 638 aa11.84□□□□□ -0.51
SRSF1-207ENST00000584668 NBPF4Q96M43 638 aa11.84□□□□□ -0.51
SRSF1-207ENST00000584668 WDR90Q96KV7 1748 aa11.83□□□□□ -0.52
SRSF1-207ENST00000584668 PLEKHG2Q9H7P9 1386 aa11.83□□□□□ -0.52
SRSF1-207ENST00000584668 TOMM70O94826 608 aa11.83□□□□□ -0.52
SRSF1-207ENST00000584668 RRS1Q15050 365 aaKnown RBP11.83□□□□□ -0.52
SRSF1-207ENST00000584668 C16orf71Q8IYS4 520 aaPredicted RBP11.83□□□□□ -0.52
SRSF1-207ENST00000584668 USHBP1Q8N6Y0 703 aa11.83□□□□□ -0.52
SRSF1-207ENST00000584668 SPG7Q9UQ90 795 aa11.83□□□□□ -0.52
SRSF1-207ENST00000584668 TMOD3Q9NYL9 352 aa11.82□□□□□ -0.52
SRSF1-207ENST00000584668 MAP2P11137 1827 aaKnown RBP11.81□□□□□ -0.52
SRSF1-207ENST00000584668 KIF3CO14782 793 aa11.81□□□□□ -0.52
SRSF1-207ENST00000584668 CDCA8Q53HL2 280 aa11.81□□□□□ -0.52
SRSF1-207ENST00000584668 N4BP2Q86UW6 1770 aaPredicted RBP11.81□□□□□ -0.52
SRSF1-207ENST00000584668 LOC102724428A0A0B4J2F2 783 aa11.8□□□□□ -0.52
SRSF1-207ENST00000584668 GNPATO15228 680 aa11.8□□□□□ -0.52
SRSF1-207ENST00000584668 SIK1P57059 783 aa11.8□□□□□ -0.52
SRSF1-207ENST00000584668 TGFB2P61812 414 aa11.8□□□□□ -0.52
SRSF1-207ENST00000584668 WWC3Q9ULE0 1092 aa11.8□□□□□ -0.52
SRSF1-207ENST00000584668 ANKRD26Q9UPS8 1709 aa11.8□□□□□ -0.52
SRSF1-207ENST00000584668 ARFGEF1Q9Y6D6 1849 aa11.79□□□□□ -0.52
SRSF1-207ENST00000584668 ZNF831Q5JPB2 1677 aa11.79□□□□□ -0.52
SRSF1-207ENST00000584668 TNRC6CQ9HCJ0 1690 aaKnown RBP11.79□□□□□ -0.52
SRSF1-207ENST00000584668 PXDNLA1KZ92 1463 aa11.79□□□□□ -0.52
SRSF1-207ENST00000584668 TMF1P82094 1093 aa11.79□□□□□ -0.52
SRSF1-207ENST00000584668 GGNBP2Q9H3C7 697 aa11.79□□□□□ -0.52
SRSF1-207ENST00000584668 CCDC87Q9NVE4 849 aa11.79□□□□□ -0.52
SRSF1-207ENST00000584668 BCS1LQ9Y276 419 aa11.79□□□□□ -0.52
SRSF1-207ENST00000584668 BRCA1P38398 1863 aaKnown RBP11.78□□□□□ -0.52
SRSF1-207ENST00000584668 C4AP0C0L4 1744 aa11.78□□□□□ -0.52
SRSF1-207ENST00000584668 CYP27B1O15528 508 aa11.78□□□□□ -0.52
SRSF1-207ENST00000584668 MMP10P09238 476 aa11.78□□□□□ -0.52
SRSF1-207ENST00000584668 ATP6V1AP38606 617 aa11.78□□□□□ -0.52
SRSF1-207ENST00000584668 NLGN1Q8N2Q7 840 aa11.78□□□□□ -0.52
SRSF1-207ENST00000584668 RTCBQ9Y3I0 505 aaKnown RBP11.78□□□□□ -0.52
SRSF1-207ENST00000584668 KDM2BQ8NHM5 1336 aa11.78□□□□□ -0.52
SRSF1-207ENST00000584668 C10orf71Q711Q0 1435 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms