RNA–Protein interactions for RNA: ENST00000584014.5

ERBB2-216, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-216ENST00000584014 TATP17735 454 aaPredicted RBP11.17□□□□□ -0.62
ERBB2-216ENST00000584014 IL13P35225 146 aa11.17□□□□□ -0.62
ERBB2-216ENST00000584014 U2AF1Q01081 240 aaKnown RBP eCLIP11.17□□□□□ -0.62
ERBB2-216ENST00000584014 DDB1Q16531 1140 aa11.17□□□□□ -0.62
ERBB2-216ENST00000584014 THRAP3Q9Y2W1 955 aaKnown RBP11.17□□□□□ -0.62
ERBB2-216ENST00000584014 EXOC5O00471 708 aa11.16□□□□□ -0.62
ERBB2-216ENST00000584014 AEBP1Q8IUX7 1158 aa11.16□□□□□ -0.62
ERBB2-216ENST00000584014 DDX54Q8TDD1 881 aaKnown RBP11.16□□□□□ -0.62
ERBB2-216ENST00000584014 FAM208AQ9UK61 1670 aaKnown RBP11.16□□□□□ -0.62
ERBB2-216ENST00000584014 BARGINQ6ZT62 677 aa11.15□□□□□ -0.62
ERBB2-216ENST00000584014 KRT27Q7Z3Y8 459 aa11.15□□□□□ -0.62
ERBB2-216ENST00000584014 MRS2Q9HD23 443 aa11.15□□□□□ -0.62
ERBB2-216ENST00000584014 RGS12O14924 1447 aa11.15□□□□□ -0.62
ERBB2-216ENST00000584014 BRWD3Q6RI45 1802 aa11.14□□□□□ -0.63
ERBB2-216ENST00000584014 WDR43Q15061 677 aaKnown RBP eCLIP11.14□□□□□ -0.63
ERBB2-216ENST00000584014 CDCA7Q9BWT1 371 aaPredicted RBP11.14□□□□□ -0.63
ERBB2-216ENST00000584014 CCDC184Q52MB2 194 aa11.13□□□□□ -0.63
ERBB2-216ENST00000584014 HOMEZQ8IX15 550 aa11.13□□□□□ -0.63
ERBB2-216ENST00000584014 ZCRB1Q8TBF4 217 aaKnown RBP11.13□□□□□ -0.63
ERBB2-216ENST00000584014 IGSF1Q8N6C5 1336 aa11.12□□□□□ -0.63
ERBB2-216ENST00000584014 WNK3Q9BYP7 1800 aa11.12□□□□□ -0.63
ERBB2-216ENST00000584014 ONECUT3O60422 494 aaPredicted RBP11.12□□□□□ -0.63
ERBB2-216ENST00000584014 NEFMP07197 916 aa11.12□□□□□ -0.63
ERBB2-216ENST00000584014 SPG7Q9UQ90 795 aa11.12□□□□□ -0.63
ERBB2-216ENST00000584014 KAT6BQ8WYB5 2073 aa11.12□□□□□ -0.63
ERBB2-216ENST00000584014 MEGF6O75095 1541 aa11.11□□□□□ -0.63
ERBB2-216ENST00000584014 SENP3-EIF4A1A0A087X0R7 540 aa11.11□□□□□ -0.63
ERBB2-216ENST00000584014 PLEKHO1Q53GL0 409 aaPredicted RBP11.11□□□□□ -0.63
ERBB2-216ENST00000584014 CCDC146Q8IYE0 955 aa11.11□□□□□ -0.63
ERBB2-216ENST00000584014 MIER1Q8N108 512 aa11.11□□□□□ -0.63
ERBB2-216ENST00000584014 COL3A1P02461 1466 aaPredicted RBP11.11□□□□□ -0.63
ERBB2-216ENST00000584014 PARP4Q9UKK3 1724 aaKnown RBP11.1□□□□□ -0.63
ERBB2-216ENST00000584014 PRKAR2BP31323 418 aa11.1□□□□□ -0.63
ERBB2-216ENST00000584014 FAM9BQ8IZU0 186 aa11.1□□□□□ -0.63
ERBB2-216ENST00000584014 SYTL4Q96C24 671 aaPredicted RBP11.1□□□□□ -0.63
ERBB2-216ENST00000584014 ACSBG1Q96GR2 724 aa11.1□□□□□ -0.63
ERBB2-216ENST00000584014 THSD7AQ9UPZ6 1657 aa11.1□□□□□ -0.63
ERBB2-216ENST00000584014 LRRC37A3O60309 1634 aa11.09□□□□□ -0.63
ERBB2-216ENST00000584014 C1orf141Q5JVX7 400 aa11.09□□□□□ -0.63
ERBB2-216ENST00000584014 ZNF530Q6P9A1 599 aaPredicted RBP11.09□□□□□ -0.63
ERBB2-216ENST00000584014 MARCH10Q8NA82 808 aaPredicted RBP11.09□□□□□ -0.63
ERBB2-216ENST00000584014 DISP2A7MBM2 1401 aa11.09□□□□□ -0.63
ERBB2-216ENST00000584014 TRIM37O94972 964 aa11.08□□□□□ -0.64
ERBB2-216ENST00000584014 ADAMTS8Q9UP79 889 aa11.08□□□□□ -0.64
ERBB2-216ENST00000584014 RGPD1P0DJD0 1748 aa11.08□□□□□ -0.64
ERBB2-216ENST00000584014 OVOS2A0A0G2JMS6 1433 aa11.08□□□□□ -0.64
ERBB2-216ENST00000584014 PCDH11XQ9BZA7 1347 aa11.08□□□□□ -0.64
ERBB2-216ENST00000584014 PCDH11YQ9BZA8 1340 aa11.08□□□□□ -0.64
ERBB2-216ENST00000584014 MAPK8IP3Q9UPT6 1336 aa11.08□□□□□ -0.64
ERBB2-216ENST00000584014 FCHSD2O94868 740 aa11.07□□□□□ -0.64
ERBB2-216ENST00000584014 NEUROD2Q15784 382 aa11.07□□□□□ -0.64
ERBB2-216ENST00000584014 AMOTQ4VCS5 1084 aa11.07□□□□□ -0.64
ERBB2-216ENST00000584014 FAM196AQ6ZSG2 479 aa11.07□□□□□ -0.64
ERBB2-216ENST00000584014 PHACTR3Q96KR7 559 aa11.07□□□□□ -0.64
ERBB2-216ENST00000584014 RSPH6AQ9H0K4 717 aa11.07□□□□□ -0.64
ERBB2-216ENST00000584014 PNNQ9H307 717 aaKnown RBP11.07□□□□□ -0.64
ERBB2-216ENST00000584014 TNS2Q63HR2 1409 aa11.07□□□□□ -0.64
ERBB2-216ENST00000584014 SF3B2Q13435 895 aaKnown RBP11.06□□□□□ -0.64
ERBB2-216ENST00000584014 MTHFSDQ2M296 383 aaKnown RBP11.06□□□□□ -0.64
ERBB2-216ENST00000584014 IFNL2Q8IZJ0 200 aa11.06□□□□□ -0.64
ERBB2-216ENST00000584014 CYP27B1O15528 508 aa11.05□□□□□ -0.64
ERBB2-216ENST00000584014 MPRIPQ6WCQ1 1025 aa11.05□□□□□ -0.64
ERBB2-216ENST00000584014 TAOK2Q9UL54 1235 aa11.05□□□□□ -0.64
ERBB2-216ENST00000584014 RRP7AQ9Y3A4 280 aaKnown RBP11.05□□□□□ -0.64
ERBB2-216ENST00000584014 KDRP35968 1356 aa11.04□□□□□ -0.64
ERBB2-216ENST00000584014 PHKG2P15735 406 aa11.04□□□□□ -0.64
ERBB2-216ENST00000584014 PRIM1P49642 420 aaKnown RBP11.04□□□□□ -0.64
ERBB2-216ENST00000584014 GAS2L2Q8NHY3 880 aa11.04□□□□□ -0.64
ERBB2-216ENST00000584014 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.04□□□□□ -0.64
ERBB2-216ENST00000584014 SALL2Q9Y467 1007 aaPredicted RBP11.04□□□□□ -0.64
ERBB2-216ENST00000584014 NCAPD2Q15021 1401 aa11.03□□□□□ -0.64
ERBB2-216ENST00000584014 KCNQ2O43526 872 aa11.03□□□□□ -0.64
ERBB2-216ENST00000584014 PRKCSHP14314 528 aaPredicted RBP11.03□□□□□ -0.64
ERBB2-216ENST00000584014 PNISRQ8TF01 805 aaKnown RBP11.03□□□□□ -0.64
ERBB2-216ENST00000584014 RTF1Q92541 710 aaKnown RBP11.03□□□□□ -0.64
ERBB2-216ENST00000584014 SHANK3Q9BYB0 1731 aa11.03□□□□□ -0.64
ERBB2-216ENST00000584014 PKD1L3Q7Z443 1732 aa11.02□□□□□ -0.65
ERBB2-216ENST00000584014 APBA3O96018 575 aa11.02□□□□□ -0.65
ERBB2-216ENST00000584014 CABP4P57796 275 aa11.02□□□□□ -0.65
ERBB2-216ENST00000584014 AKAP4Q5JQC9 854 aa11.02□□□□□ -0.65
ERBB2-216ENST00000584014 PTF1AQ7RTS3 328 aa11.02□□□□□ -0.65
ERBB2-216ENST00000584014 RUNDC1Q96C34 613 aa11.02□□□□□ -0.65
ERBB2-216ENST00000584014 GNAT3A8MTJ3 354 aa11.01□□□□□ -0.65
ERBB2-216ENST00000584014 CCER2I3L3R5 266 aa11.01□□□□□ -0.65
ERBB2-216ENST00000584014 HSP90AB1P08238 724 aaKnown RBP11.01□□□□□ -0.65
ERBB2-216ENST00000584014 RIPK4P57078 832 aa11.01□□□□□ -0.65
ERBB2-216ENST00000584014 DCTN1Q14203 1278 aa11.01□□□□□ -0.65
ERBB2-216ENST00000584014 MCM10Q7L590 875 aa11.01□□□□□ -0.65
ERBB2-216ENST00000584014 UPF1Q92900 1129 aaKnown RBP eCLIP11.01□□□□□ -0.65
ERBB2-216ENST00000584014 LGR6Q9HBX8 967 aa11.01□□□□□ -0.65
ERBB2-216ENST00000584014 DOT1LQ8TEK3 1739 aa11.01□□□□□ -0.65
ERBB2-216ENST00000584014 APAF1O14727 1248 aa11□□□□□ -0.65
ERBB2-216ENST00000584014 NFE2L2Q16236 605 aa11□□□□□ -0.65
ERBB2-216ENST00000584014 DCAF5Q96JK2 942 aa11□□□□□ -0.65
ERBB2-216ENST00000584014 PLEKHF1Q96S99 279 aa11□□□□□ -0.65
ERBB2-216ENST00000584014 TMOD3Q9NYL9 352 aa11□□□□□ -0.65
ERBB2-216ENST00000584014 MAP3K5Q99683 1374 aa11□□□□□ -0.65
ERBB2-216ENST00000584014 TMPOP42166 694 aaKnown RBP10.99□□□□□ -0.65
ERBB2-216ENST00000584014 EN1Q05925 392 aaPredicted RBP10.99□□□□□ -0.65
ERBB2-216ENST00000584014 TEFQ10587 303 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms