RNA–Protein interactions for RNA: ENST00000583965.5

CDRT1-207, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDRT1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-207ENST00000583965 MEGF6O75095 1541 aa15.47■□□□□ 0.07
CDRT1-207ENST00000583965 OVOS2A0A0G2JMS6 1433 aa15.46■□□□□ 0.07
CDRT1-207ENST00000583965 TATP17735 454 aaPredicted RBP15.46■□□□□ 0.07
CDRT1-207ENST00000583965 PRKAR2BP31323 418 aa15.46■□□□□ 0.07
CDRT1-207ENST00000583965 LRRC37A3O60309 1634 aa15.46■□□□□ 0.06
CDRT1-207ENST00000583965 RUNDC1Q96C34 613 aa15.45■□□□□ 0.06
CDRT1-207ENST00000583965 PLEKHF1Q96S99 279 aa15.45■□□□□ 0.06
CDRT1-207ENST00000583965 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.45■□□□□ 0.06
CDRT1-207ENST00000583965 MAPK8IP3Q9UPT6 1336 aa15.44■□□□□ 0.06
CDRT1-207ENST00000583965 KAT6BQ8WYB5 2073 aa15.44■□□□□ 0.06
CDRT1-207ENST00000583965 AMOTQ4VCS5 1084 aa15.44■□□□□ 0.06
CDRT1-207ENST00000583965 BRWD3Q6RI45 1802 aa15.44■□□□□ 0.06
CDRT1-207ENST00000583965 RBM6P78332 1123 aaKnown RBP15.43■□□□□ 0.06
CDRT1-207ENST00000583965 SCN11AQ9UI33 1791 aa15.42■□□□□ 0.06
CDRT1-207ENST00000583965 ONECUT3O60422 494 aaPredicted RBP15.42■□□□□ 0.06
CDRT1-207ENST00000583965 PLEKHO1Q53GL0 409 aaPredicted RBP15.42■□□□□ 0.06
CDRT1-207ENST00000583965 CCDC146Q8IYE0 955 aa15.42■□□□□ 0.06
CDRT1-207ENST00000583965 RGS17Q9UGC6 210 aaPredicted RBP15.42■□□□□ 0.06
CDRT1-207ENST00000583965 SPG7Q9UQ90 795 aa15.42■□□□□ 0.06
CDRT1-207ENST00000583965 TNS2Q63HR2 1409 aa15.42■□□□□ 0.06
CDRT1-207ENST00000583965 FAM98CQ17RN3 349 aaKnown RBP15.41■□□□□ 0.06
CDRT1-207ENST00000583965 GAS2L2Q8NHY3 880 aa15.41■□□□□ 0.06
CDRT1-207ENST00000583965 ZCRB1Q8TBF4 217 aaKnown RBP15.4■□□□□ 0.06
CDRT1-207ENST00000583965 PHACTR3Q96KR7 559 aa15.4■□□□□ 0.06
CDRT1-207ENST00000583965 EXOC5O00471 708 aa15.39■□□□□ 0.05
CDRT1-207ENST00000583965 RXRBP28702 533 aa15.39■□□□□ 0.05
CDRT1-207ENST00000583965 NGEFQ8N5V2 710 aa15.39■□□□□ 0.05
CDRT1-207ENST00000583965 PCDH11XQ9BZA7 1347 aa15.39■□□□□ 0.05
CDRT1-207ENST00000583965 PCDH11YQ9BZA8 1340 aa15.39■□□□□ 0.05
CDRT1-207ENST00000583965 ADAMTS7Q9UKP4 1686 aa15.38■□□□□ 0.05
CDRT1-207ENST00000583965 NFE2L2Q16236 605 aa15.38■□□□□ 0.05
CDRT1-207ENST00000583965 DDB1Q16531 1140 aa15.38■□□□□ 0.05
CDRT1-207ENST00000583965 MTHFSDQ2M296 383 aaKnown RBP15.38■□□□□ 0.05
CDRT1-207ENST00000583965 NCBP3Q53F19 620 aaKnown RBP15.38■□□□□ 0.05
CDRT1-207ENST00000583965 APAF1O14727 1248 aa15.37■□□□□ 0.05
CDRT1-207ENST00000583965 TMPOP42166 694 aaKnown RBP15.37■□□□□ 0.05
CDRT1-207ENST00000583965 ZNF530Q6P9A1 599 aaPredicted RBP15.37■□□□□ 0.05
CDRT1-207ENST00000583965 POTEAQ6S8J7 498 aa15.37■□□□□ 0.05
CDRT1-207ENST00000583965 ITGB4P16144 1822 aa15.37■□□□□ 0.05
CDRT1-207ENST00000583965 SBF2Q86WG5 1849 aa15.36■□□□□ 0.05
CDRT1-207ENST00000583965 A0A0G2JS52 829 aa15.36■□□□□ 0.05
CDRT1-207ENST00000583965 MYT1Q01538 1121 aa15.36■□□□□ 0.05
CDRT1-207ENST00000583965 AKAP4Q5JQC9 854 aa15.36■□□□□ 0.05
CDRT1-207ENST00000583965 C1orf141Q5JVX7 400 aa15.36■□□□□ 0.05
CDRT1-207ENST00000583965 IFNL2Q8IZJ0 200 aa15.36■□□□□ 0.05
CDRT1-207ENST00000583965 MAP3K5Q99683 1374 aa15.36■□□□□ 0.05
CDRT1-207ENST00000583965 SIPA1L3O60292 1781 aaPredicted RBP15.35■□□□□ 0.05
CDRT1-207ENST00000583965 HTATSF1O43719 755 aaKnown RBP15.35■□□□□ 0.05
CDRT1-207ENST00000583965 HSP90AB1P08238 724 aaKnown RBP15.35■□□□□ 0.05
CDRT1-207ENST00000583965 LMOD3Q0VAK6 560 aa15.35■□□□□ 0.05
CDRT1-207ENST00000583965 SEPT12Q8IYM1 358 aa15.35■□□□□ 0.05
CDRT1-207ENST00000583965 GNAT3A8MTJ3 354 aa15.34■□□□□ 0.05
CDRT1-207ENST00000583965 CYP27B1O15528 508 aa15.34■□□□□ 0.05
CDRT1-207ENST00000583965 PHKG2P15735 406 aa15.34■□□□□ 0.05
CDRT1-207ENST00000583965 RIPK4P57078 832 aa15.34■□□□□ 0.05
CDRT1-207ENST00000583965 DOT1LQ8TEK3 1739 aa15.34■□□□□ 0.05
CDRT1-207ENST00000583965 PDE3BQ13370 1112 aa15.33■□□□□ 0.04
CDRT1-207ENST00000583965 NKX1-1Q15270 411 aaPredicted RBP15.33■□□□□ 0.04
CDRT1-207ENST00000583965 CCDC27Q2M243 656 aa15.33■□□□□ 0.04
CDRT1-207ENST00000583965 TOGARAM1Q9Y4F4 1720 aa15.33■□□□□ 0.04
CDRT1-207ENST00000583965 RGS12O14924 1447 aa15.33■□□□□ 0.04
CDRT1-207ENST00000583965 DDX54Q8TDD1 881 aaKnown RBP15.32■□□□□ 0.04
CDRT1-207ENST00000583965 RTF1Q92541 710 aaKnown RBP15.32■□□□□ 0.04
CDRT1-207ENST00000583965 NEUROD2Q15784 382 aa15.31■□□□□ 0.04
CDRT1-207ENST00000583965 DCAF5Q96JK2 942 aa15.31■□□□□ 0.04
CDRT1-207ENST00000583965 RRP7AQ9Y3A4 280 aaKnown RBP15.31■□□□□ 0.04
CDRT1-207ENST00000583965 BCL9O00512 1426 aa15.31■□□□□ 0.04
CDRT1-207ENST00000583965 HNRNPUQ00839 825 aaKnown RBP eCLIP15.3■□□□□ 0.04
CDRT1-207ENST00000583965 MARCH10Q8NA82 808 aaPredicted RBP15.3■□□□□ 0.04
CDRT1-207ENST00000583965 EP400Q96L91 3159 aa15.3■□□□□ 0.04
CDRT1-207ENST00000583965 NHSQ6T4R5 1651 aa15.29■□□□□ 0.04
CDRT1-207ENST00000583965 MRC1P22897 1456 aa15.29■□□□□ 0.04
CDRT1-207ENST00000583965 KDM6AO15550 1401 aaPredicted RBP15.29■□□□□ 0.04
CDRT1-207ENST00000583965 CEMIPQ8WUJ3 1361 aa15.29■□□□□ 0.04
CDRT1-207ENST00000583965 KRT27Q7Z3Y8 459 aa15.29■□□□□ 0.04
CDRT1-207ENST00000583965 TRIM35Q9UPQ4 493 aa15.29■□□□□ 0.04
CDRT1-207ENST00000583965 RNMTO43148 476 aaKnown RBP15.28■□□□□ 0.04
CDRT1-207ENST00000583965 CALD1Q05682 793 aaKnown RBP15.28■□□□□ 0.04
CDRT1-207ENST00000583965 ERVV-2B6SEH9 535 aa15.27■□□□□ 0.04
CDRT1-207ENST00000583965 MPRIPQ6WCQ1 1025 aa15.27■□□□□ 0.04
CDRT1-207ENST00000583965 WWC1Q8IX03 1113 aa15.27■□□□□ 0.04
CDRT1-207ENST00000583965 IL17REQ8NFR9 667 aa15.27■□□□□ 0.04
CDRT1-207ENST00000583965 KDM3BQ7LBC6 1761 aa15.26■□□□□ 0.03
CDRT1-207ENST00000583965 ZBED9Q6R2W3 1325 aa15.26■□□□□ 0.03
CDRT1-207ENST00000583965 ZNF521Q96K83 1311 aa15.26■□□□□ 0.03
CDRT1-207ENST00000583965 MCM10Q7L590 875 aa15.26■□□□□ 0.03
CDRT1-207ENST00000583965 WDR63Q8IWG1 891 aa15.26■□□□□ 0.03
CDRT1-207ENST00000583965 LGR6Q9HBX8 967 aa15.26■□□□□ 0.03
CDRT1-207ENST00000583965 SALL2Q9Y467 1007 aaPredicted RBP15.26■□□□□ 0.03
CDRT1-207ENST00000583965 PAPPAQ13219 1627 aa15.25■□□□□ 0.03
CDRT1-207ENST00000583965 BTAF1O14981 1849 aa15.25■□□□□ 0.03
CDRT1-207ENST00000583965 IL16Q14005 1332 aa15.24■□□□□ 0.03
CDRT1-207ENST00000583965 SENP3-EIF4A1A0A087X0R7 540 aa15.24■□□□□ 0.03
CDRT1-207ENST00000583965 TEFQ10587 303 aa15.24■□□□□ 0.03
CDRT1-207ENST00000583965 DCTN1Q14203 1278 aa15.24■□□□□ 0.03
CDRT1-207ENST00000583965 FAM196AQ6ZSG2 479 aa15.24■□□□□ 0.03
CDRT1-207ENST00000583965 UBR2Q8IWV8 1755 aa15.24■□□□□ 0.03
CDRT1-207ENST00000583965 CENPBP07199 599 aaPredicted RBP15.23■□□□□ 0.03
CDRT1-207ENST00000583965 SLC52A2Q9HAB3 445 aa15.23■□□□□ 0.03
CDRT1-207ENST00000583965 CABP4P57796 275 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms