RNA–Protein interactions for RNA: ENST00000582980.1

CDH8-208, Transcript of cadherin 8, humanhuman

TSL 5

Gene CDH8, Length 376 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-208ENST00000582980 OVOS2A0A0G2JMS6 1433 aa16.38■□□□□ 0.21
CDH8-208ENST00000582980 DISP2A7MBM2 1401 aa16.38■□□□□ 0.21
CDH8-208ENST00000582980 AMOTQ4VCS5 1084 aa16.38■□□□□ 0.21
CDH8-208ENST00000582980 GLI3P10071 1580 aa16.38■□□□□ 0.21
CDH8-208ENST00000582980 PKD1L3Q7Z443 1732 aa16.37■□□□□ 0.21
CDH8-208ENST00000582980 PLEKHO1Q53GL0 409 aaPredicted RBP16.37■□□□□ 0.21
CDH8-208ENST00000582980 GAS2L2Q8NHY3 880 aa16.37■□□□□ 0.21
CDH8-208ENST00000582980 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.37■□□□□ 0.21
CDH8-208ENST00000582980 SPG7Q9UQ90 795 aa16.36■□□□□ 0.21
CDH8-208ENST00000582980 PHACTR3Q96KR7 559 aa16.35■□□□□ 0.21
CDH8-208ENST00000582980 APAF1O14727 1248 aa16.34■□□□□ 0.21
CDH8-208ENST00000582980 NFE2L2Q16236 605 aa16.34■□□□□ 0.21
CDH8-208ENST00000582980 FAM98CQ17RN3 349 aaKnown RBP16.34■□□□□ 0.21
CDH8-208ENST00000582980 NGEFQ8N5V2 710 aa16.34■□□□□ 0.21
CDH8-208ENST00000582980 TNS2Q63HR2 1409 aa16.34■□□□□ 0.21
CDH8-208ENST00000582980 THSD7AQ9UPZ6 1657 aa16.34■□□□□ 0.21
CDH8-208ENST00000582980 TMPOP42166 694 aaKnown RBP16.33■□□□□ 0.2
CDH8-208ENST00000582980 RBM6P78332 1123 aaKnown RBP16.33■□□□□ 0.2
CDH8-208ENST00000582980 ZCRB1Q8TBF4 217 aaKnown RBP16.33■□□□□ 0.2
CDH8-208ENST00000582980 PCDH11XQ9BZA7 1347 aa16.33■□□□□ 0.2
CDH8-208ENST00000582980 PCDH11YQ9BZA8 1340 aa16.33■□□□□ 0.2
CDH8-208ENST00000582980 LRRC37A3O60309 1634 aa16.33■□□□□ 0.2
CDH8-208ENST00000582980 A0A0G2JS52 829 aa16.32■□□□□ 0.2
CDH8-208ENST00000582980 EXOC5O00471 708 aa16.32■□□□□ 0.2
CDH8-208ENST00000582980 MYT1Q01538 1121 aa16.32■□□□□ 0.2
CDH8-208ENST00000582980 MTHFSDQ2M296 383 aaKnown RBP16.32■□□□□ 0.2
CDH8-208ENST00000582980 C1orf141Q5JVX7 400 aa16.32■□□□□ 0.2
CDH8-208ENST00000582980 ZNF530Q6P9A1 599 aaPredicted RBP16.32■□□□□ 0.2
CDH8-208ENST00000582980 DLG5Q8TDM6 1919 aa16.31■□□□□ 0.2
CDH8-208ENST00000582980 HNRNPUQ00839 825 aaKnown RBP eCLIP16.31■□□□□ 0.2
CDH8-208ENST00000582980 LMOD3Q0VAK6 560 aa16.31■□□□□ 0.2
CDH8-208ENST00000582980 DDB1Q16531 1140 aa16.31■□□□□ 0.2
CDH8-208ENST00000582980 NCBP3Q53F19 620 aaKnown RBP16.31■□□□□ 0.2
CDH8-208ENST00000582980 SHANK3Q9BYB0 1731 aa16.31■□□□□ 0.2
CDH8-208ENST00000582980 MAP3K5Q99683 1374 aa16.3■□□□□ 0.2
CDH8-208ENST00000582980 ONECUT3O60422 494 aaPredicted RBP16.3■□□□□ 0.2
CDH8-208ENST00000582980 RXRBP28702 533 aa16.3■□□□□ 0.2
CDH8-208ENST00000582980 RIPK4P57078 832 aa16.3■□□□□ 0.2
CDH8-208ENST00000582980 AKAP4Q5JQC9 854 aa16.3■□□□□ 0.2
CDH8-208ENST00000582980 IFNL2Q8IZJ0 200 aa16.3■□□□□ 0.2
CDH8-208ENST00000582980 RGS17Q9UGC6 210 aaPredicted RBP16.3■□□□□ 0.2
CDH8-208ENST00000582980 GNAT3A8MTJ3 354 aa16.29■□□□□ 0.2
CDH8-208ENST00000582980 NEUROD2Q15784 382 aa16.29■□□□□ 0.2
CDH8-208ENST00000582980 RTF1Q92541 710 aaKnown RBP16.29■□□□□ 0.2
CDH8-208ENST00000582980 RRP7AQ9Y3A4 280 aaKnown RBP16.29■□□□□ 0.2
CDH8-208ENST00000582980 HTATSF1O43719 755 aaKnown RBP16.28■□□□□ 0.2
CDH8-208ENST00000582980 HSP90AB1P08238 724 aaKnown RBP16.28■□□□□ 0.2
CDH8-208ENST00000582980 PHKG2P15735 406 aa16.28■□□□□ 0.2
CDH8-208ENST00000582980 CCDC27Q2M243 656 aa16.28■□□□□ 0.2
CDH8-208ENST00000582980 SEPT12Q8IYM1 358 aa16.27■□□□□ 0.2
CDH8-208ENST00000582980 DDX54Q8TDD1 881 aaKnown RBP16.27■□□□□ 0.2
CDH8-208ENST00000582980 CYP27B1O15528 508 aa16.26■□□□□ 0.19
CDH8-208ENST00000582980 PDE3BQ13370 1112 aa16.26■□□□□ 0.19
CDH8-208ENST00000582980 POTEAQ6S8J7 498 aa16.26■□□□□ 0.19
CDH8-208ENST00000582980 YTHDC1Q96MU7 727 aaKnown RBP16.26■□□□□ 0.19
CDH8-208ENST00000582980 SALL2Q9Y467 1007 aaPredicted RBP16.26■□□□□ 0.19
CDH8-208ENST00000582980 SENP3-EIF4A1A0A087X0R7 540 aa16.25■□□□□ 0.19
CDH8-208ENST00000582980 VIRMAQ69YN4 1812 aaKnown RBP16.24■□□□□ 0.19
CDH8-208ENST00000582980 ZBED9Q6R2W3 1325 aa16.24■□□□□ 0.19
CDH8-208ENST00000582980 CALD1Q05682 793 aaKnown RBP16.24■□□□□ 0.19
CDH8-208ENST00000582980 DCAF5Q96JK2 942 aa16.24■□□□□ 0.19
CDH8-208ENST00000582980 ADAMTS7Q9UKP4 1686 aa16.24■□□□□ 0.19
CDH8-208ENST00000582980 SCN11AQ9UI33 1791 aa16.23■□□□□ 0.19
CDH8-208ENST00000582980 NKX1-1Q15270 411 aaPredicted RBP16.23■□□□□ 0.19
CDH8-208ENST00000582980 WWC1Q8IX03 1113 aa16.23■□□□□ 0.19
CDH8-208ENST00000582980 TRIM35Q9UPQ4 493 aa16.23■□□□□ 0.19
CDH8-208ENST00000582980 RGS12O14924 1447 aa16.22■□□□□ 0.19
CDH8-208ENST00000582980 BRWD3Q6RI45 1802 aa16.22■□□□□ 0.19
CDH8-208ENST00000582980 KDM6AO15550 1401 aaPredicted RBP16.21■□□□□ 0.19
CDH8-208ENST00000582980 RNMTO43148 476 aaKnown RBP16.21■□□□□ 0.19
CDH8-208ENST00000582980 MPRIPQ6WCQ1 1025 aa16.21■□□□□ 0.19
CDH8-208ENST00000582980 MCM10Q7L590 875 aa16.21■□□□□ 0.19
CDH8-208ENST00000582980 WDR63Q8IWG1 891 aa16.21■□□□□ 0.19
CDH8-208ENST00000582980 MARCH10Q8NA82 808 aaPredicted RBP16.21■□□□□ 0.19
CDH8-208ENST00000582980 CEMIPQ8WUJ3 1361 aa16.21■□□□□ 0.19
CDH8-208ENST00000582980 TEFQ10587 303 aa16.2■□□□□ 0.18
CDH8-208ENST00000582980 DCTN1Q14203 1278 aa16.2■□□□□ 0.18
CDH8-208ENST00000582980 KRT27Q7Z3Y8 459 aa16.2■□□□□ 0.18
CDH8-208ENST00000582980 IL17REQ8NFR9 667 aa16.2■□□□□ 0.18
CDH8-208ENST00000582980 ZNF521Q96K83 1311 aa16.19■□□□□ 0.18
CDH8-208ENST00000582980 MRC1P22897 1456 aa16.19■□□□□ 0.18
CDH8-208ENST00000582980 DOT1LQ8TEK3 1739 aa16.19■□□□□ 0.18
CDH8-208ENST00000582980 BCL9O00512 1426 aa16.19■□□□□ 0.18
CDH8-208ENST00000582980 IL16Q14005 1332 aa16.19■□□□□ 0.18
CDH8-208ENST00000582980 ERVV-2B6SEH9 535 aa16.18■□□□□ 0.18
CDH8-208ENST00000582980 GOLGA2Q08379 1002 aa16.18■□□□□ 0.18
CDH8-208ENST00000582980 THUMPD2Q9BTF0 503 aaKnown RBP16.18■□□□□ 0.18
CDH8-208ENST00000582980 LGR6Q9HBX8 967 aa16.18■□□□□ 0.18
CDH8-208ENST00000582980 TOGARAM1Q9Y4F4 1720 aa16.18■□□□□ 0.18
CDH8-208ENST00000582980 SIPA1L3O60292 1781 aaPredicted RBP16.17■□□□□ 0.18
CDH8-208ENST00000582980 CABP4P57796 275 aa16.16■□□□□ 0.18
CDH8-208ENST00000582980 SLC52A2Q9HAB3 445 aa16.16■□□□□ 0.18
CDH8-208ENST00000582980 ITGB4P16144 1822 aa16.15■□□□□ 0.18
CDH8-208ENST00000582980 GNAI1P63096 354 aa16.15■□□□□ 0.18
CDH8-208ENST00000582980 TAF7Q15545 349 aaPredicted RBP16.15■□□□□ 0.18
CDH8-208ENST00000582980 FAM196AQ6ZSG2 479 aa16.15■□□□□ 0.18
CDH8-208ENST00000582980 MYH16Q9H6N6 1097 aa16.15■□□□□ 0.18
CDH8-208ENST00000582980 IFT57Q9NWB7 429 aa16.15■□□□□ 0.18
CDH8-208ENST00000582980 BABAM1Q9NWV8 329 aa16.15■□□□□ 0.18
CDH8-208ENST00000582980 KAT6BQ8WYB5 2073 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms