RNA–Protein interactions for RNA: ENST00000582951.5

CUEDC1-211, Transcript of CUE domain containing 1, humanhuman

TSL 2

Gene CUEDC1, Length 756 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-211ENST00000582951 RTF1Q92541 710 aaKnown RBP20.35■□□□□ 0.85
CUEDC1-211ENST00000582951 CFAP44Q96MT7 982 aa20.35■□□□□ 0.85
CUEDC1-211ENST00000582951 PLEKHG2Q9H7P9 1386 aa20.34■□□□□ 0.85
CUEDC1-211ENST00000582951 RARSP54136 660 aaKnown RBP20.34■□□□□ 0.85
CUEDC1-211ENST00000582951 HAP1P54257 671 aaPredicted RBP20.34■□□□□ 0.85
CUEDC1-211ENST00000582951 LAS1LQ9Y4W2 734 aaKnown RBP20.33■□□□□ 0.85
CUEDC1-211ENST00000582951 CRB1P82279 1406 aa20.33■□□□□ 0.84
CUEDC1-211ENST00000582951 VIRMAQ69YN4 1812 aaKnown RBP20.32■□□□□ 0.84
CUEDC1-211ENST00000582951 COL16A1Q07092 1604 aaPredicted RBP20.32■□□□□ 0.84
CUEDC1-211ENST00000582951 PLIN1O60240 522 aa20.32■□□□□ 0.84
CUEDC1-211ENST00000582951 DCTN1Q14203 1278 aa20.32■□□□□ 0.84
CUEDC1-211ENST00000582951 PRDM11Q9NQV5 511 aa20.32■□□□□ 0.84
CUEDC1-211ENST00000582951 GNAT3A8MTJ3 354 aa20.31■□□□□ 0.84
CUEDC1-211ENST00000582951 CHRNA2Q15822 529 aa20.31■□□□□ 0.84
CUEDC1-211ENST00000582951 AMOTQ4VCS5 1084 aa20.31■□□□□ 0.84
CUEDC1-211ENST00000582951 MCM10Q7L590 875 aa20.31■□□□□ 0.84
CUEDC1-211ENST00000582951 MBIPQ9NS73 344 aa20.31■□□□□ 0.84
CUEDC1-211ENST00000582951 BCAR3O75815 825 aa20.3■□□□□ 0.84
CUEDC1-211ENST00000582951 PLEKHO1Q53GL0 409 aaPredicted RBP20.3■□□□□ 0.84
CUEDC1-211ENST00000582951 ZNF428Q96B54 188 aa20.3■□□□□ 0.84
CUEDC1-211ENST00000582951 COL14A1Q05707 1796 aaKnown RBP20.29■□□□□ 0.84
CUEDC1-211ENST00000582951 CSB-PGBD3P0DP91 1061 aa20.29■□□□□ 0.84
CUEDC1-211ENST00000582951 PIP4K2BP78356 416 aa20.29■□□□□ 0.84
CUEDC1-211ENST00000582951 PARP4Q9UKK3 1724 aaKnown RBP20.29■□□□□ 0.84
CUEDC1-211ENST00000582951 PKD1L3Q7Z443 1732 aa20.28■□□□□ 0.84
CUEDC1-211ENST00000582951 CANXP27824 592 aaKnown RBP20.28■□□□□ 0.84
CUEDC1-211ENST00000582951 NLRP2Q9NX02 1062 aa20.28■□□□□ 0.84
CUEDC1-211ENST00000582951 COL5A2P05997 1499 aaPredicted RBP20.28■□□□□ 0.84
CUEDC1-211ENST00000582951 OVOS2A0A0G2JMS6 1433 aa20.27■□□□□ 0.84
CUEDC1-211ENST00000582951 CHL1O00533 1208 aa20.27■□□□□ 0.84
CUEDC1-211ENST00000582951 ADAMTS7Q9UKP4 1686 aa20.26■□□□□ 0.83
CUEDC1-211ENST00000582951 ALDH1L2Q3SY69 923 aa20.26■□□□□ 0.83
CUEDC1-211ENST00000582951 PELP1Q8IZL8 1130 aaKnown RBP20.26■□□□□ 0.83
CUEDC1-211ENST00000582951 EXOC6Q8TAG9 804 aa20.26■□□□□ 0.83
CUEDC1-211ENST00000582951 PDE3AQ14432 1141 aa20.25■□□□□ 0.83
CUEDC1-211ENST00000582951 ZNF530Q6P9A1 599 aaPredicted RBP20.25■□□□□ 0.83
CUEDC1-211ENST00000582951 RAPGEF4Q8WZA2 1011 aa20.25■□□□□ 0.83
CUEDC1-211ENST00000582951 CRBNQ96SW2 442 aa20.25■□□□□ 0.83
CUEDC1-211ENST00000582951 WDR17Q8IZU2 1322 aa20.25■□□□□ 0.83
CUEDC1-211ENST00000582951 AKAP4Q5JQC9 854 aa20.24■□□□□ 0.83
CUEDC1-211ENST00000582951 C20orf194Q5TEA3 1177 aa20.24■□□□□ 0.83
CUEDC1-211ENST00000582951 SMC4Q9NTJ3 1288 aa20.24■□□□□ 0.83
CUEDC1-211ENST00000582951 BABAM1Q9NWV8 329 aa20.24■□□□□ 0.83
CUEDC1-211ENST00000582951 CEMIPQ8WUJ3 1361 aa20.23■□□□□ 0.83
CUEDC1-211ENST00000582951 MEGF6O75095 1541 aa20.23■□□□□ 0.83
CUEDC1-211ENST00000582951 TATP17735 454 aaPredicted RBP20.23■□□□□ 0.83
CUEDC1-211ENST00000582951 KDM3BQ7LBC6 1761 aa20.23■□□□□ 0.83
CUEDC1-211ENST00000582951 KIF16BQ96L93 1317 aa20.23■□□□□ 0.83
CUEDC1-211ENST00000582951 SCN11AQ9UI33 1791 aa20.22■□□□□ 0.83
CUEDC1-211ENST00000582951 C1orf141Q5JVX7 400 aa20.22■□□□□ 0.83
CUEDC1-211ENST00000582951 SSH1Q8WYL5 1049 aa20.22■□□□□ 0.83
CUEDC1-211ENST00000582951 BCL2L13Q9BXK5 485 aa20.22■□□□□ 0.83
CUEDC1-211ENST00000582951 SIPA1L3O60292 1781 aaPredicted RBP20.21■□□□□ 0.83
CUEDC1-211ENST00000582951 VAMP4O75379 141 aa20.21■□□□□ 0.83
CUEDC1-211ENST00000582951 MS4A1P11836 297 aa20.21■□□□□ 0.83
CUEDC1-211ENST00000582951 TWISTNBQ3B726 338 aaPredicted RBP20.21■□□□□ 0.83
CUEDC1-211ENST00000582951 IL17REQ8NFR9 667 aa20.21■□□□□ 0.83
CUEDC1-211ENST00000582951 FRAT1Q92837 279 aaPredicted RBP20.21■□□□□ 0.83
CUEDC1-211ENST00000582951 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.21■□□□□ 0.83
CUEDC1-211ENST00000582951 TSPYL4Q9UJ04 414 aa20.21■□□□□ 0.83
CUEDC1-211ENST00000582951 BRPF1P55201 1214 aaPredicted RBP20.2■□□□□ 0.82
CUEDC1-211ENST00000582951 ZKSCAN2Q63HK3 967 aa20.2■□□□□ 0.82
CUEDC1-211ENST00000582951 B4GALNT3Q6L9W6 998 aa20.2■□□□□ 0.82
CUEDC1-211ENST00000582951 CCDC136Q96JN2 1154 aa20.2■□□□□ 0.82
CUEDC1-211ENST00000582951 PLCH1Q4KWH8 1693 aa20.19■□□□□ 0.82
CUEDC1-211ENST00000582951 C8orf58Q8NAV2 365 aa20.19■□□□□ 0.82
CUEDC1-211ENST00000582951 SPG7Q9UQ90 795 aa20.19■□□□□ 0.82
CUEDC1-211ENST00000582951 TAF7Q15545 349 aaPredicted RBP20.18■□□□□ 0.82
CUEDC1-211ENST00000582951 TOM1L2Q6ZVM7 507 aa20.18■□□□□ 0.82
CUEDC1-211ENST00000582951 TSPYL6Q8N831 410 aa20.18■□□□□ 0.82
CUEDC1-211ENST00000582951 IPO8O15397 1037 aaKnown RBP20.16■□□□□ 0.82
CUEDC1-211ENST00000582951 CARD10Q9BWT7 1032 aa20.16■□□□□ 0.82
CUEDC1-211ENST00000582951 SOS1Q07889 1333 aaPredicted RBP20.16■□□□□ 0.82
CUEDC1-211ENST00000582951 RNMTO43148 476 aaKnown RBP20.15■□□□□ 0.82
CUEDC1-211ENST00000582951 HSPA1LP34931 641 aa20.15■□□□□ 0.82
CUEDC1-211ENST00000582951 WNK3Q9BYP7 1800 aa20.14■□□□□ 0.81
CUEDC1-211ENST00000582951 NRAPQ86VF7 1730 aa20.14■□□□□ 0.81
CUEDC1-211ENST00000582951 ELL2O00472 640 aaPredicted RBP20.14■□□□□ 0.81
CUEDC1-211ENST00000582951 EVA1CP58658 441 aa20.14■□□□□ 0.81
CUEDC1-211ENST00000582951 TEFQ10587 303 aa20.14■□□□□ 0.81
CUEDC1-211ENST00000582951 MRPL50Q8N5N7 158 aaKnown RBP20.14■□□□□ 0.81
CUEDC1-211ENST00000582951 CACNA1FO60840 1977 aa20.14■□□□□ 0.81
CUEDC1-211ENST00000582951 SHANK3Q9BYB0 1731 aa20.13■□□□□ 0.81
CUEDC1-211ENST00000582951 AAMPQ13685 434 aa20.13■□□□□ 0.81
CUEDC1-211ENST00000582951 ATF7IPQ6VMQ6 1270 aa20.13■□□□□ 0.81
CUEDC1-211ENST00000582951 MPRIPQ6WCQ1 1025 aa20.13■□□□□ 0.81
CUEDC1-211ENST00000582951 FTSJ3Q8IY81 847 aaKnown RBP20.13■□□□□ 0.81
CUEDC1-211ENST00000582951 PANK1Q8TE04 598 aa20.13■□□□□ 0.81
CUEDC1-211ENST00000582951 LGR6Q9HBX8 967 aa20.13■□□□□ 0.81
CUEDC1-211ENST00000582951 STRN4Q9NRL3 753 aa20.13■□□□□ 0.81
CUEDC1-211ENST00000582951 MIS18AQ9NYP9 233 aa20.13■□□□□ 0.81
CUEDC1-211ENST00000582951 NWD2Q9ULI1 1742 aa20.13■□□□□ 0.81
CUEDC1-211ENST00000582951 MRC1P22897 1456 aa20.12■□□□□ 0.81
CUEDC1-211ENST00000582951 DZIP1LQ8IYY4 767 aaKnown RBP20.12■□□□□ 0.81
CUEDC1-211ENST00000582951 IFNL2Q8IZJ0 200 aa20.12■□□□□ 0.81
CUEDC1-211ENST00000582951 NOB1Q9ULX3 412 aaKnown RBP20.12■□□□□ 0.81
CUEDC1-211ENST00000582951 HSP90AB1P08238 724 aaKnown RBP20.11■□□□□ 0.81
CUEDC1-211ENST00000582951 TRIM27P14373 513 aa20.11■□□□□ 0.81
CUEDC1-211ENST00000582951 PHKG2P15735 406 aa20.11■□□□□ 0.81
CUEDC1-211ENST00000582951 LARP1Q6PKG0 1096 aaKnown RBP20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms