RNA–Protein interactions for RNA: ENST00000582923.1

PDLIM1P2-201, Transcript of PDZ and LIM domain 1 pseudogene 2, humanhuman

BASIC

Gene PDLIM1P2, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P2-201ENST00000582923 LRRC37A3O60309 1634 aa12.04□□□□□ -0.48
PDLIM1P2-201ENST00000582923 THRAP3Q9Y2W1 955 aaKnown RBP12.03□□□□□ -0.48
PDLIM1P2-201ENST00000582923 DISP2A7MBM2 1401 aa12.03□□□□□ -0.48
PDLIM1P2-201ENST00000582923 QTRT2Q9H974 415 aaKnown RBP12.02□□□□□ -0.49
PDLIM1P2-201ENST00000582923 THSD7AQ9UPZ6 1657 aa12.02□□□□□ -0.49
PDLIM1P2-201ENST00000582923 PLEKHG2Q9H7P9 1386 aa12.02□□□□□ -0.49
PDLIM1P2-201ENST00000582923 FAM98CQ17RN3 349 aaKnown RBP12.01□□□□□ -0.49
PDLIM1P2-201ENST00000582923 PLEKHO1Q53GL0 409 aaPredicted RBP12.01□□□□□ -0.49
PDLIM1P2-201ENST00000582923 GJD4Q96KN9 370 aaPredicted RBP12.01□□□□□ -0.49
PDLIM1P2-201ENST00000582923 PLEKHF1Q96S99 279 aa12.01□□□□□ -0.49
PDLIM1P2-201ENST00000582923 CDCA7Q9BWT1 371 aaPredicted RBP12.01□□□□□ -0.49
PDLIM1P2-201ENST00000582923 SPG7Q9UQ90 795 aa12.01□□□□□ -0.49
PDLIM1P2-201ENST00000582923 TNS2Q63HR2 1409 aa12.01□□□□□ -0.49
PDLIM1P2-201ENST00000582923 SHANK3Q9BYB0 1731 aa12□□□□□ -0.49
PDLIM1P2-201ENST00000582923 SENP3-EIF4A1A0A087X0R7 540 aa12□□□□□ -0.49
PDLIM1P2-201ENST00000582923 AMOTQ4VCS5 1084 aa12□□□□□ -0.49
PDLIM1P2-201ENST00000582923 ZNF530Q6P9A1 599 aaPredicted RBP12□□□□□ -0.49
PDLIM1P2-201ENST00000582923 BARGINQ6ZT62 677 aa12□□□□□ -0.49
PDLIM1P2-201ENST00000582923 PHACTR3Q96KR7 559 aa12□□□□□ -0.49
PDLIM1P2-201ENST00000582923 YTHDC1Q96MU7 727 aaKnown RBP12□□□□□ -0.49
PDLIM1P2-201ENST00000582923 APAF1O14727 1248 aa11.99□□□□□ -0.49
PDLIM1P2-201ENST00000582923 HNRNPUQ00839 825 aaKnown RBP eCLIP11.99□□□□□ -0.49
PDLIM1P2-201ENST00000582923 GAS2L2Q8NHY3 880 aa11.99□□□□□ -0.49
PDLIM1P2-201ENST00000582923 RRP7AQ9Y3A4 280 aaKnown RBP11.99□□□□□ -0.49
PDLIM1P2-201ENST00000582923 PCDH11XQ9BZA7 1347 aa11.99□□□□□ -0.49
PDLIM1P2-201ENST00000582923 PCDH11YQ9BZA8 1340 aa11.99□□□□□ -0.49
PDLIM1P2-201ENST00000582923 MAP3K5Q99683 1374 aa11.98□□□□□ -0.49
PDLIM1P2-201ENST00000582923 RBM6P78332 1123 aaKnown RBP11.98□□□□□ -0.49
PDLIM1P2-201ENST00000582923 NEUROD2Q15784 382 aa11.98□□□□□ -0.49
PDLIM1P2-201ENST00000582923 NFE2L2Q16236 605 aa11.98□□□□□ -0.49
PDLIM1P2-201ENST00000582923 DDB1Q16531 1140 aa11.98□□□□□ -0.49
PDLIM1P2-201ENST00000582923 MTHFSDQ2M296 383 aaKnown RBP11.98□□□□□ -0.49
PDLIM1P2-201ENST00000582923 C1orf141Q5JVX7 400 aa11.98□□□□□ -0.49
PDLIM1P2-201ENST00000582923 ZCRB1Q8TBF4 217 aaKnown RBP11.98□□□□□ -0.49
PDLIM1P2-201ENST00000582923 DLG5Q8TDM6 1919 aa11.98□□□□□ -0.49
PDLIM1P2-201ENST00000582923 TMPOP42166 694 aaKnown RBP11.97□□□□□ -0.49
PDLIM1P2-201ENST00000582923 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.97□□□□□ -0.49
PDLIM1P2-201ENST00000582923 EXOC5O00471 708 aa11.96□□□□□ -0.49
PDLIM1P2-201ENST00000582923 RXRBP28702 533 aa11.96□□□□□ -0.49
PDLIM1P2-201ENST00000582923 RIPK4P57078 832 aa11.96□□□□□ -0.49
PDLIM1P2-201ENST00000582923 LMOD3Q0VAK6 560 aa11.96□□□□□ -0.49
PDLIM1P2-201ENST00000582923 DDX54Q8TDD1 881 aaKnown RBP11.96□□□□□ -0.49
PDLIM1P2-201ENST00000582923 RGS17Q9UGC6 210 aaPredicted RBP11.96□□□□□ -0.49
PDLIM1P2-201ENST00000582923 SALL2Q9Y467 1007 aaPredicted RBP11.96□□□□□ -0.49
PDLIM1P2-201ENST00000582923 AKAP4Q5JQC9 854 aa11.95□□□□□ -0.5
PDLIM1P2-201ENST00000582923 POTEAQ6S8J7 498 aa11.95□□□□□ -0.5
PDLIM1P2-201ENST00000582923 SEPT12Q8IYM1 358 aa11.95□□□□□ -0.5
PDLIM1P2-201ENST00000582923 IFNL2Q8IZJ0 200 aa11.95□□□□□ -0.5
PDLIM1P2-201ENST00000582923 RTF1Q92541 710 aaKnown RBP11.95□□□□□ -0.5
PDLIM1P2-201ENST00000582923 GNAT3A8MTJ3 354 aa11.94□□□□□ -0.5
PDLIM1P2-201ENST00000582923 PHKG2P15735 406 aa11.94□□□□□ -0.5
PDLIM1P2-201ENST00000582923 PDE3BQ13370 1112 aa11.94□□□□□ -0.5
PDLIM1P2-201ENST00000582923 NGEFQ8N5V2 710 aa11.94□□□□□ -0.5
PDLIM1P2-201ENST00000582923 DOT1LQ8TEK3 1739 aa11.94□□□□□ -0.5
PDLIM1P2-201ENST00000582923 RGS12O14924 1447 aa11.94□□□□□ -0.5
PDLIM1P2-201ENST00000582923 VIRMAQ69YN4 1812 aaKnown RBP11.93□□□□□ -0.5
PDLIM1P2-201ENST00000582923 CYP27B1O15528 508 aa11.93□□□□□ -0.5
PDLIM1P2-201ENST00000582923 HSP90AB1P08238 724 aaKnown RBP11.93□□□□□ -0.5
PDLIM1P2-201ENST00000582923 BRWD3Q6RI45 1802 aa11.93□□□□□ -0.5
PDLIM1P2-201ENST00000582923 SCN11AQ9UI33 1791 aa11.92□□□□□ -0.5
PDLIM1P2-201ENST00000582923 TOGARAM1Q9Y4F4 1720 aa11.92□□□□□ -0.5
PDLIM1P2-201ENST00000582923 ADAMTS7Q9UKP4 1686 aa11.92□□□□□ -0.5
PDLIM1P2-201ENST00000582923 MPRIPQ6WCQ1 1025 aa11.92□□□□□ -0.5
PDLIM1P2-201ENST00000582923 KDM6AO15550 1401 aaPredicted RBP11.92□□□□□ -0.5
PDLIM1P2-201ENST00000582923 ZBED9Q6R2W3 1325 aa11.91□□□□□ -0.5
PDLIM1P2-201ENST00000582923 HTATSF1O43719 755 aaKnown RBP11.91□□□□□ -0.5
PDLIM1P2-201ENST00000582923 ONECUT3O60422 494 aaPredicted RBP11.91□□□□□ -0.5
PDLIM1P2-201ENST00000582923 MCM10Q7L590 875 aa11.91□□□□□ -0.5
PDLIM1P2-201ENST00000582923 DCAF5Q96JK2 942 aa11.91□□□□□ -0.5
PDLIM1P2-201ENST00000582923 MRC1P22897 1456 aa11.9□□□□□ -0.5
PDLIM1P2-201ENST00000582923 CALD1Q05682 793 aaKnown RBP11.9□□□□□ -0.5
PDLIM1P2-201ENST00000582923 DCTN1Q14203 1278 aa11.9□□□□□ -0.5
PDLIM1P2-201ENST00000582923 CCDC27Q2M243 656 aa11.9□□□□□ -0.5
PDLIM1P2-201ENST00000582923 NCBP3Q53F19 620 aaKnown RBP11.9□□□□□ -0.5
PDLIM1P2-201ENST00000582923 MARCH10Q8NA82 808 aaPredicted RBP11.9□□□□□ -0.5
PDLIM1P2-201ENST00000582923 THUMPD2Q9BTF0 503 aaKnown RBP11.9□□□□□ -0.5
PDLIM1P2-201ENST00000582923 TRIM35Q9UPQ4 493 aa11.9□□□□□ -0.5
PDLIM1P2-201ENST00000582923 RNMTO43148 476 aaKnown RBP11.89□□□□□ -0.51
PDLIM1P2-201ENST00000582923 TEFQ10587 303 aa11.89□□□□□ -0.51
PDLIM1P2-201ENST00000582923 KRT27Q7Z3Y8 459 aa11.89□□□□□ -0.51
PDLIM1P2-201ENST00000582923 WWC1Q8IX03 1113 aa11.89□□□□□ -0.51
PDLIM1P2-201ENST00000582923 NKX1-1Q15270 411 aaPredicted RBP11.88□□□□□ -0.51
PDLIM1P2-201ENST00000582923 LGR6Q9HBX8 967 aa11.88□□□□□ -0.51
PDLIM1P2-201ENST00000582923 CEMIPQ8WUJ3 1361 aa11.88□□□□□ -0.51
PDLIM1P2-201ENST00000582923 NHSQ6T4R5 1651 aa11.87□□□□□ -0.51
PDLIM1P2-201ENST00000582923 SIPA1L3O60292 1781 aaPredicted RBP11.87□□□□□ -0.51
PDLIM1P2-201ENST00000582923 CABP4P57796 275 aa11.87□□□□□ -0.51
PDLIM1P2-201ENST00000582923 FAM182BQ5T319 152 aa11.87□□□□□ -0.51
PDLIM1P2-201ENST00000582923 IL17REQ8NFR9 667 aa11.87□□□□□ -0.51
PDLIM1P2-201ENST00000582923 SYTL4Q96C24 671 aaPredicted RBP11.87□□□□□ -0.51
PDLIM1P2-201ENST00000582923 LAS1LQ9Y4W2 734 aaKnown RBP11.87□□□□□ -0.51
PDLIM1P2-201ENST00000582923 ZNF521Q96K83 1311 aa11.86□□□□□ -0.51
PDLIM1P2-201ENST00000582923 ITGB4P16144 1822 aa11.86□□□□□ -0.51
PDLIM1P2-201ENST00000582923 GOLGA2Q08379 1002 aa11.86□□□□□ -0.51
PDLIM1P2-201ENST00000582923 WDR63Q8IWG1 891 aa11.86□□□□□ -0.51
PDLIM1P2-201ENST00000582923 ACSBG1Q96GR2 724 aa11.86□□□□□ -0.51
PDLIM1P2-201ENST00000582923 TMOD3Q9NYL9 352 aa11.86□□□□□ -0.51
PDLIM1P2-201ENST00000582923 IL16Q14005 1332 aa11.86□□□□□ -0.51
PDLIM1P2-201ENST00000582923 KDM3BQ7LBC6 1761 aa11.85□□□□□ -0.51
PDLIM1P2-201ENST00000582923 ERVV-2B6SEH9 535 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms