RNA–Protein interactions for RNA: ENST00000582475.1

SNRPD1-204, Transcript of small nuclear ribonucleoprotein D1 polypeptide, humanhuman

TSL 3 BASIC

Gene SNRPD1, Length 723 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD1-204ENST00000582475 NBPF6Q5VWK0 638 aa16.27■□□□□ 0.2
SNRPD1-204ENST00000582475 NBPF4Q96M43 638 aa16.27■□□□□ 0.2
SNRPD1-204ENST00000582475 FXR2P51116 673 aaKnown RBP eCLIP16.26■□□□□ 0.19
SNRPD1-204ENST00000582475 EIF4A2Q14240 407 aaKnown RBP16.26■□□□□ 0.19
SNRPD1-204ENST00000582475 GLI3P10071 1580 aa16.26■□□□□ 0.19
SNRPD1-204ENST00000582475 PEAK1Q9H792 1746 aa16.25■□□□□ 0.19
SNRPD1-204ENST00000582475 EYA1Q99502 592 aa16.24■□□□□ 0.19
SNRPD1-204ENST00000582475 CDCA7Q9BWT1 371 aaPredicted RBP16.24■□□□□ 0.19
SNRPD1-204ENST00000582475 SMG6Q86US8 1419 aaKnown RBP16.24■□□□□ 0.19
SNRPD1-204ENST00000582475 PARD3Q8TEW0 1356 aa16.24■□□□□ 0.19
SNRPD1-204ENST00000582475 CDK12Q9NYV4 1490 aaPredicted RBP16.23■□□□□ 0.19
SNRPD1-204ENST00000582475 USHBP1Q8N6Y0 703 aa16.23■□□□□ 0.19
SNRPD1-204ENST00000582475 IL13P35225 146 aa16.22■□□□□ 0.19
SNRPD1-204ENST00000582475 RGS12O14924 1447 aa16.21■□□□□ 0.19
SNRPD1-204ENST00000582475 EXOC5O00471 708 aa16.21■□□□□ 0.19
SNRPD1-204ENST00000582475 DIAPH1O60610 1272 aaKnown RBP16.21■□□□□ 0.19
SNRPD1-204ENST00000582475 IL2RBP14784 551 aa16.21■□□□□ 0.19
SNRPD1-204ENST00000582475 CFAP53Q96M91 514 aa16.21■□□□□ 0.19
SNRPD1-204ENST00000582475 PRKRIP1Q9H875 184 aaPredicted RBP16.21■□□□□ 0.19
SNRPD1-204ENST00000582475 PDE3BQ13370 1112 aa16.2■□□□□ 0.18
SNRPD1-204ENST00000582475 KRT27Q7Z3Y8 459 aa16.2■□□□□ 0.18
SNRPD1-204ENST00000582475 DDB1Q16531 1140 aa16.19■□□□□ 0.18
SNRPD1-204ENST00000582475 RAPGEF4Q8WZA2 1011 aa16.18■□□□□ 0.18
SNRPD1-204ENST00000582475 ANP32CO43423 234 aa16.17■□□□□ 0.18
SNRPD1-204ENST00000582475 TATP17735 454 aaPredicted RBP16.17■□□□□ 0.18
SNRPD1-204ENST00000582475 MYBBP1AQ9BQG0 1328 aaKnown RBP16.17■□□□□ 0.18
SNRPD1-204ENST00000582475 SULT6B1Q6IMI4 303 aa16.16■□□□□ 0.18
SNRPD1-204ENST00000582475 NUDCQ9Y266 331 aa16.16■□□□□ 0.18
SNRPD1-204ENST00000582475 DISP2A7MBM2 1401 aa16.16■□□□□ 0.18
SNRPD1-204ENST00000582475 IGSF1Q8N6C5 1336 aa16.16■□□□□ 0.18
SNRPD1-204ENST00000582475 U2SURPO15042 1029 aaKnown RBP16.15■□□□□ 0.18
SNRPD1-204ENST00000582475 ZCRB1Q8TBF4 217 aaKnown RBP16.15■□□□□ 0.18
SNRPD1-204ENST00000582475 RGPD2P0DJD1 1756 aa16.15■□□□□ 0.18
SNRPD1-204ENST00000582475 FAM182BQ5T319 152 aa16.14■□□□□ 0.17
SNRPD1-204ENST00000582475 AEBP1Q8IUX7 1158 aa16.13■□□□□ 0.17
SNRPD1-204ENST00000582475 MARCH10Q8NA82 808 aaPredicted RBP16.13■□□□□ 0.17
SNRPD1-204ENST00000582475 DDX54Q8TDD1 881 aaKnown RBP16.13■□□□□ 0.17
SNRPD1-204ENST00000582475 FAM208AQ9UK61 1670 aaKnown RBP16.13■□□□□ 0.17
SNRPD1-204ENST00000582475 THSD7AQ9UPZ6 1657 aa16.12■□□□□ 0.17
SNRPD1-204ENST00000582475 HMOX1P09601 288 aa16.12■□□□□ 0.17
SNRPD1-204ENST00000582475 FAM196AQ6ZSG2 479 aa16.12■□□□□ 0.17
SNRPD1-204ENST00000582475 NCAPD2Q15021 1401 aa16.11■□□□□ 0.17
SNRPD1-204ENST00000582475 COL3A1P02461 1466 aaPredicted RBP16.1■□□□□ 0.17
SNRPD1-204ENST00000582475 BRWD3Q6RI45 1802 aa16.1■□□□□ 0.17
SNRPD1-204ENST00000582475 U2AF1L5P0DN76 240 aaPredicted RBP16.1■□□□□ 0.17
SNRPD1-204ENST00000582475 U2AF1Q01081 240 aaKnown RBP eCLIP16.1■□□□□ 0.174e-7■□□□□ 8.9
SNRPD1-204ENST00000582475 PLEKHO1Q53GL0 409 aaPredicted RBP16.1■□□□□ 0.17
SNRPD1-204ENST00000582475 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.1■□□□□ 0.172e-8■□□□□ 11.1
SNRPD1-204ENST00000582475 SPG7Q9UQ90 795 aa16.1■□□□□ 0.17
SNRPD1-204ENST00000582475 MEGF6O75095 1541 aa16.09■□□□□ 0.17
SNRPD1-204ENST00000582475 PARP4Q9UKK3 1724 aaKnown RBP16.08■□□□□ 0.17
SNRPD1-204ENST00000582475 SOCS7O14512 581 aa16.08■□□□□ 0.16
SNRPD1-204ENST00000582475 AMOTQ4VCS5 1084 aa16.08■□□□□ 0.16
SNRPD1-204ENST00000582475 OVOS2A0A0G2JMS6 1433 aa16.08■□□□□ 0.16
SNRPD1-204ENST00000582475 PRKAR2AP13861 404 aaKnown RBP16.07■□□□□ 0.16
SNRPD1-204ENST00000582475 UPF1Q92900 1129 aaKnown RBP eCLIP16.07■□□□□ 0.16
SNRPD1-204ENST00000582475 KDRP35968 1356 aa16.07■□□□□ 0.16
SNRPD1-204ENST00000582475 TNS2Q63HR2 1409 aa16.07■□□□□ 0.16
SNRPD1-204ENST00000582475 SPDYE4A6NLX3 237 aa16.06■□□□□ 0.16
SNRPD1-204ENST00000582475 CYP27B1O15528 508 aa16.06■□□□□ 0.16
SNRPD1-204ENST00000582475 FCHSD2O94868 740 aa16.06■□□□□ 0.16
SNRPD1-204ENST00000582475 PCDH11XQ9BZA7 1347 aa16.05■□□□□ 0.16
SNRPD1-204ENST00000582475 PCDH11YQ9BZA8 1340 aa16.05■□□□□ 0.16
SNRPD1-204ENST00000582475 DIEXFQ68CQ4 756 aaKnown RBP16.05■□□□□ 0.16
SNRPD1-204ENST00000582475 IFNL2Q8IZJ0 200 aa16.05■□□□□ 0.16
SNRPD1-204ENST00000582475 RSPH6AQ9H0K4 717 aa16.05■□□□□ 0.16
SNRPD1-204ENST00000582475 WNK3Q9BYP7 1800 aa16.04■□□□□ 0.16
SNRPD1-204ENST00000582475 TRIM37O94972 964 aa16.04■□□□□ 0.16
SNRPD1-204ENST00000582475 PRKAR2BP31323 418 aa16.04■□□□□ 0.16
SNRPD1-204ENST00000582475 CCDC184Q52MB2 194 aa16.04■□□□□ 0.16
SNRPD1-204ENST00000582475 CCDC125Q86Z20 511 aa16.04■□□□□ 0.16
SNRPD1-204ENST00000582475 LRRC37A3O60309 1634 aa16.04■□□□□ 0.16
SNRPD1-204ENST00000582475 RGPD1P0DJD0 1748 aa16.03■□□□□ 0.16
SNRPD1-204ENST00000582475 PRR29P0C7W0 189 aa16.03■□□□□ 0.16
SNRPD1-204ENST00000582475 PHKG2P15735 406 aa16.03■□□□□ 0.16
SNRPD1-204ENST00000582475 ZNF530Q6P9A1 599 aaPredicted RBP16.03■□□□□ 0.16
SNRPD1-204ENST00000582475 ACSBG1Q96GR2 724 aa16.03■□□□□ 0.16
SNRPD1-204ENST00000582475 PNNQ9H307 717 aaKnown RBP16.03■□□□□ 0.16
SNRPD1-204ENST00000582475 PLEKHG2Q9H7P9 1386 aa16.02■□□□□ 0.16
SNRPD1-204ENST00000582475 HAX1O00165 279 aa16.02■□□□□ 0.16
SNRPD1-204ENST00000582475 SF3B2Q13435 895 aaKnown RBP16.02■□□□□ 0.16
SNRPD1-204ENST00000582475 WDR43Q15061 677 aaKnown RBP eCLIP16.02■□□□□ 0.16
SNRPD1-204ENST00000582475 NKX1-1Q15270 411 aaPredicted RBP16.02■□□□□ 0.16
SNRPD1-204ENST00000582475 MTHFSDQ2M296 383 aaKnown RBP16.02■□□□□ 0.16
SNRPD1-204ENST00000582475 BCL9O00512 1426 aa16.02■□□□□ 0.15
SNRPD1-204ENST00000582475 C1orf141Q5JVX7 400 aa16.01■□□□□ 0.15
SNRPD1-204ENST00000582475 PHACTR3Q96KR7 559 aa16.01■□□□□ 0.15
SNRPD1-204ENST00000582475 BCL11BQ9C0K0 894 aaPredicted RBP16.01■□□□□ 0.15
SNRPD1-204ENST00000582475 KAT6BQ8WYB5 2073 aa16.01■□□□□ 0.15
SNRPD1-204ENST00000582475 KCNQ2O43526 872 aa16■□□□□ 0.15
SNRPD1-204ENST00000582475 NEFMP07197 916 aa16■□□□□ 0.15
SNRPD1-204ENST00000582475 HSP90AB1P08238 724 aaKnown RBP16■□□□□ 0.15
SNRPD1-204ENST00000582475 PRIM1P49642 420 aaKnown RBP16■□□□□ 0.15
SNRPD1-204ENST00000582475 AKAP4Q5JQC9 854 aa16■□□□□ 0.15
SNRPD1-204ENST00000582475 MRS2Q9HD23 443 aa16■□□□□ 0.15
SNRPD1-204ENST00000582475 ADAMTS8Q9UP79 889 aa16■□□□□ 0.15
SNRPD1-204ENST00000582475 PTF1AQ7RTS3 328 aa15.99■□□□□ 0.15
SNRPD1-204ENST00000582475 GAS2L2Q8NHY3 880 aa15.99■□□□□ 0.15
SNRPD1-204ENST00000582475 PLEKHF1Q96S99 279 aa15.99■□□□□ 0.15
SNRPD1-204ENST00000582475 APBA3O96018 575 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms