RNA–Protein interactions for RNA: ENST00000582303.1

CDC42EP4-208, Transcript of CDC42 effector protein 4, humanhuman

TSL 5

Gene CDC42EP4, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-208ENST00000582303 KIF24Q5T7B8 1368 aa20.3■□□□□ 0.84
CDC42EP4-208ENST00000582303 MAP3K5Q99683 1374 aa20.3■□□□□ 0.84
CDC42EP4-208ENST00000582303 MYOM1P52179 1685 aa20.29■□□□□ 0.84
CDC42EP4-208ENST00000582303 ZNF827Q17R98 1081 aa20.29■□□□□ 0.84
CDC42EP4-208ENST00000582303 AKT1S1Q96B36 256 aa20.29■□□□□ 0.84
CDC42EP4-208ENST00000582303 GGNBP2Q9H3C7 697 aa20.29■□□□□ 0.84
CDC42EP4-208ENST00000582303 BTAF1O14981 1849 aa20.29■□□□□ 0.84
CDC42EP4-208ENST00000582303 PAPPAQ13219 1627 aa20.28■□□□□ 0.84
CDC42EP4-208ENST00000582303 RRS1Q15050 365 aaKnown RBP20.28■□□□□ 0.84
CDC42EP4-208ENST00000582303 TATP17735 454 aaPredicted RBP20.27■□□□□ 0.84
CDC42EP4-208ENST00000582303 TIMELESSQ9UNS1 1208 aa20.27■□□□□ 0.84
CDC42EP4-208ENST00000582303 FBLN1P23142 703 aa20.26■□□□□ 0.83
CDC42EP4-208ENST00000582303 NBPF6Q5VWK0 638 aa20.26■□□□□ 0.83
CDC42EP4-208ENST00000582303 NBPF4Q96M43 638 aa20.26■□□□□ 0.83
CDC42EP4-208ENST00000582303 INSRP06213 1382 aa20.25■□□□□ 0.83
CDC42EP4-208ENST00000582303 FLT4P35916 1363 aa20.25■□□□□ 0.83
CDC42EP4-208ENST00000582303 CCNL1Q9UK58 526 aaPredicted RBP20.25■□□□□ 0.83
CDC42EP4-208ENST00000582303 KAT6BQ8WYB5 2073 aa20.25■□□□□ 0.83
CDC42EP4-208ENST00000582303 PCDH11XQ9BZA7 1347 aa20.25■□□□□ 0.83
CDC42EP4-208ENST00000582303 PCDH11YQ9BZA8 1340 aa20.25■□□□□ 0.83
CDC42EP4-208ENST00000582303 MEGF6O75095 1541 aa20.24■□□□□ 0.83
CDC42EP4-208ENST00000582303 PNPLA7Q6ZV29 1317 aa20.23■□□□□ 0.83
CDC42EP4-208ENST00000582303 GPR162Q16538 588 aa20.21■□□□□ 0.83
CDC42EP4-208ENST00000582303 NSD2O96028 1365 aa20.21■□□□□ 0.83
CDC42EP4-208ENST00000582303 HSP90AB2PQ58FF8 381 aa20.2■□□□□ 0.82
CDC42EP4-208ENST00000582303 KLHL34Q8N239 644 aa20.2■□□□□ 0.82
CDC42EP4-208ENST00000582303 USHBP1Q8N6Y0 703 aa20.2■□□□□ 0.82
CDC42EP4-208ENST00000582303 ZNF784Q8NCA9 323 aaPredicted RBP20.19■□□□□ 0.82
CDC42EP4-208ENST00000582303 FLAD1Q8NFF5 587 aa20.19■□□□□ 0.82
CDC42EP4-208ENST00000582303 MSH5O43196 834 aa20.18■□□□□ 0.82
CDC42EP4-208ENST00000582303 KCNQ4P56696 695 aa20.17■□□□□ 0.82
CDC42EP4-208ENST00000582303 SMARCC1Q92922 1105 aaPredicted RBP20.17■□□□□ 0.82
CDC42EP4-208ENST00000582303 CLSPNQ9HAW4 1339 aa20.17■□□□□ 0.82
CDC42EP4-208ENST00000582303 QSER1Q2KHR3 1735 aa20.16■□□□□ 0.82
CDC42EP4-208ENST00000582303 DOT1LQ8TEK3 1739 aa20.16■□□□□ 0.82
CDC42EP4-208ENST00000582303 NSD3Q9BZ95 1437 aa20.16■□□□□ 0.82
CDC42EP4-208ENST00000582303 SPG7Q9UQ90 795 aa20.15■□□□□ 0.82
CDC42EP4-208ENST00000582303 PPM1GO15355 546 aaPredicted RBP20.14■□□□□ 0.81
CDC42EP4-208ENST00000582303 MPRIPQ6WCQ1 1025 aa20.14■□□□□ 0.81
CDC42EP4-208ENST00000582303 PALLDQ8WX93 1383 aa20.13■□□□□ 0.81
CDC42EP4-208ENST00000582303 PELP1Q8IZL8 1130 aaKnown RBP20.13■□□□□ 0.81
CDC42EP4-208ENST00000582303 CARD14Q9BXL6 1004 aa20.13■□□□□ 0.81
CDC42EP4-208ENST00000582303 GRIN3BO60391 1043 aa20.12■□□□□ 0.81
CDC42EP4-208ENST00000582303 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.12■□□□□ 0.81
CDC42EP4-208ENST00000582303 EMILIN1Q9Y6C2 1016 aa20.12■□□□□ 0.81
CDC42EP4-208ENST00000582303 GOLGB1Q14789 3259 aaKnown RBP20.12■□□□□ 0.81
CDC42EP4-208ENST00000582303 LY75O60449 1722 aa20.12■□□□□ 0.81
CDC42EP4-208ENST00000582303 WASHC2AQ641Q2 1341 aa20.11■□□□□ 0.81
CDC42EP4-208ENST00000582303 CYP27B1O15528 508 aa20.11■□□□□ 0.81
CDC42EP4-208ENST00000582303 COL23A1Q86Y22 540 aaPredicted RBP20.11■□□□□ 0.81
CDC42EP4-208ENST00000582303 KIF20BQ96Q89 1820 aa20.11■□□□□ 0.81
CDC42EP4-208ENST00000582303 SHANK3Q9BYB0 1731 aa20.1■□□□□ 0.81
CDC42EP4-208ENST00000582303 AK7Q96M32 723 aa20.1■□□□□ 0.81
CDC42EP4-208ENST00000582303 RGPD2P0DJD1 1756 aa20.09■□□□□ 0.81
CDC42EP4-208ENST00000582303 NKX1-1Q15270 411 aaPredicted RBP20.09■□□□□ 0.81
CDC42EP4-208ENST00000582303 PLEKHG2Q9H7P9 1386 aa20.08■□□□□ 0.8
CDC42EP4-208ENST00000582303 CD2APQ9Y5K6 639 aa20.07■□□□□ 0.8
CDC42EP4-208ENST00000582303 NCAPD2Q15021 1401 aa20.07■□□□□ 0.8
CDC42EP4-208ENST00000582303 COL24A1Q17RW2 1714 aa20.06■□□□□ 0.8
CDC42EP4-208ENST00000582303 NLGN2Q8NFZ4 835 aa20.06■□□□□ 0.8
CDC42EP4-208ENST00000582303 TMOD3Q9NYL9 352 aa20.06■□□□□ 0.8
CDC42EP4-208ENST00000582303 CHD4Q14839 1912 aa20.06■□□□□ 0.8
CDC42EP4-208ENST00000582303 IFNL2Q8IZJ0 200 aa20.05■□□□□ 0.8
CDC42EP4-208ENST00000582303 PIGBQ92521 554 aa20.05■□□□□ 0.8
CDC42EP4-208ENST00000582303 MSL1Q68DK7 614 aa20.04■□□□□ 0.8
CDC42EP4-208ENST00000582303 EYA1Q99502 592 aa20.04■□□□□ 0.8
CDC42EP4-208ENST00000582303 POLR3GLQ9BT43 218 aa20.04■□□□□ 0.8
CDC42EP4-208ENST00000582303 POLKQ9UBT6 870 aa20.04■□□□□ 0.8
CDC42EP4-208ENST00000582303 SSFA2P28290 1259 aa20.03■□□□□ 0.8
CDC42EP4-208ENST00000582303 C1QTNF8P60827 252 aa20.03■□□□□ 0.8
CDC42EP4-208ENST00000582303 LOC102724428A0A0B4J2F2 783 aa20.02■□□□□ 0.8
CDC42EP4-208ENST00000582303 GIGYF1O75420 1035 aaPredicted RBP20.02■□□□□ 0.8
CDC42EP4-208ENST00000582303 SIK1P57059 783 aa20.02■□□□□ 0.8
CDC42EP4-208ENST00000582303 EIF4G2P78344 907 aaKnown RBP eCLIP20.02■□□□□ 0.8
CDC42EP4-208ENST00000582303 C5P01031 1676 aa20.01■□□□□ 0.79
CDC42EP4-208ENST00000582303 PCGF6Q9BYE7 350 aa20.01■□□□□ 0.79
CDC42EP4-208ENST00000582303 TUBGCP6Q96RT7 1819 aa20.01■□□□□ 0.79
CDC42EP4-208ENST00000582303 PKD1L3Q7Z443 1732 aa20■□□□□ 0.79
CDC42EP4-208ENST00000582303 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20■□□□□ 0.79
CDC42EP4-208ENST00000582303 HSP90AB1P08238 724 aaKnown RBP20■□□□□ 0.79
CDC42EP4-208ENST00000582303 PHKG2P15735 406 aa20■□□□□ 0.79
CDC42EP4-208ENST00000582303 SENP3-EIF4A1A0A087X0R7 540 aa19.98■□□□□ 0.79
CDC42EP4-208ENST00000582303 PHF14O94880 888 aa19.98■□□□□ 0.79
CDC42EP4-208ENST00000582303 YBX3P16989 372 aaKnown RBP eCLIP19.98■□□□□ 0.79
CDC42EP4-208ENST00000582303 ATP6V1AP38606 617 aa19.98■□□□□ 0.79
CDC42EP4-208ENST00000582303 TNNT2P45379 298 aaPredicted RBP19.98■□□□□ 0.79
CDC42EP4-208ENST00000582303 EIF4A2Q14240 407 aaKnown RBP19.98■□□□□ 0.79
CDC42EP4-208ENST00000582303 ANKRD26Q9UPS8 1709 aa19.98■□□□□ 0.79
CDC42EP4-208ENST00000582303 C4BP0C0L5 1744 aa19.96■□□□□ 0.79
CDC42EP4-208ENST00000582303 ERVV-2B6SEH9 535 aa19.96■□□□□ 0.79
CDC42EP4-208ENST00000582303 PLEKHO1Q53GL0 409 aaPredicted RBP19.96■□□□□ 0.79
CDC42EP4-208ENST00000582303 DCAF5Q96JK2 942 aa19.96■□□□□ 0.79
CDC42EP4-208ENST00000582303 GNPATO15228 680 aa19.95■□□□□ 0.78
CDC42EP4-208ENST00000582303 AMOTQ4VCS5 1084 aa19.95■□□□□ 0.78
CDC42EP4-208ENST00000582303 ASAP1Q9ULH1 1129 aa19.95■□□□□ 0.78
CDC42EP4-208ENST00000582303 IGSF1Q8N6C5 1336 aa19.95■□□□□ 0.78
CDC42EP4-208ENST00000582303 LINC00116Q8NCU8 138 aa19.94■□□□□ 0.78
CDC42EP4-208ENST00000582303 PANK3Q9H999 370 aa19.94■□□□□ 0.78
CDC42EP4-208ENST00000582303 TOGARAM1Q9Y4F4 1720 aa19.93■□□□□ 0.78
CDC42EP4-208ENST00000582303 ATG3Q9NT62 314 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms