RNA–Protein interactions for RNA: ENST00000582288.1

TVP23B-210, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-210ENST00000582288 TOM1L2Q6ZVM7 507 aa9.17□□□□□ -0.94
TVP23B-210ENST00000582288 PTF1AQ7RTS3 328 aa9.17□□□□□ -0.94
TVP23B-210ENST00000582288 AKAP12Q02952 1782 aa9.17□□□□□ -0.94
TVP23B-210ENST00000582288 SLC16A10Q8TF71 515 aa9.16□□□□□ -0.94
TVP23B-210ENST00000582288 PAPPAQ13219 1627 aa9.16□□□□□ -0.94
TVP23B-210ENST00000582288 COL18A1P39060 1754 aa9.15□□□□□ -0.94
TVP23B-210ENST00000582288 POTEFA5A3E0 1075 aa9.15□□□□□ -0.94
TVP23B-210ENST00000582288 EXOC5O00471 708 aa9.15□□□□□ -0.94
TVP23B-210ENST00000582288 ST18O60284 1047 aa9.15□□□□□ -0.94
TVP23B-210ENST00000582288 SEC24BO95487 1268 aa9.15□□□□□ -0.94
TVP23B-210ENST00000582288 GPR162Q16538 588 aa9.15□□□□□ -0.94
TVP23B-210ENST00000582288 CARD10Q9BWT7 1032 aa9.15□□□□□ -0.94
TVP23B-210ENST00000582288 COL24A1Q17RW2 1714 aa9.14□□□□□ -0.95
TVP23B-210ENST00000582288 DCAF11Q8TEB1 546 aa9.14□□□□□ -0.95
TVP23B-210ENST00000582288 PPIP5K1Q6PFW1 1433 aa9.14□□□□□ -0.95
TVP23B-210ENST00000582288 NHSQ6T4R5 1651 aa9.13□□□□□ -0.95
TVP23B-210ENST00000582288 CCDC7Q96M83 1385 aa9.13□□□□□ -0.95
TVP23B-210ENST00000582288 NLRP6P59044 892 aa9.13□□□□□ -0.95
TVP23B-210ENST00000582288 KCNH5Q8NCM2 988 aa9.13□□□□□ -0.95
TVP23B-210ENST00000582288 ABCC6O95255 1503 aa9.13□□□□□ -0.95
TVP23B-210ENST00000582288 QSER1Q2KHR3 1735 aa9.13□□□□□ -0.95
TVP23B-210ENST00000582288 SHANK3Q9BYB0 1731 aa9.13□□□□□ -0.95
TVP23B-210ENST00000582288 USP6P35125 1406 aa9.13□□□□□ -0.95
TVP23B-210ENST00000582288 CPSF1Q10570 1443 aaKnown RBP9.13□□□□□ -0.95
TVP23B-210ENST00000582288 TNS2Q63HR2 1409 aa9.13□□□□□ -0.95
TVP23B-210ENST00000582288 TRPM1Q7Z4N2 1603 aa9.13□□□□□ -0.95
TVP23B-210ENST00000582288 KIAA1210Q9ULL0 1709 aa9.12□□□□□ -0.95
TVP23B-210ENST00000582288 GRIN3BO60391 1043 aa9.12□□□□□ -0.95
TVP23B-210ENST00000582288 MNX1P50219 401 aaPredicted RBP9.12□□□□□ -0.95
TVP23B-210ENST00000582288 ARHGEF25Q86VW2 580 aa9.12□□□□□ -0.95
TVP23B-210ENST00000582288 KDM2AQ9Y2K7 1162 aa9.12□□□□□ -0.95
TVP23B-210ENST00000582288 AXIN2Q9Y2T1 843 aa9.12□□□□□ -0.95
TVP23B-210ENST00000582288 POLD1P28340 1107 aa9.11□□□□□ -0.95
TVP23B-210ENST00000582288 SRPK2P78362 688 aaKnown RBP9.1□□□□□ -0.95
TVP23B-210ENST00000582288 SLC27A3Q5K4L6 730 aa9.1□□□□□ -0.95
TVP23B-210ENST00000582288 BMP2KQ9NSY1 1161 aaPredicted RBP9.1□□□□□ -0.95
TVP23B-210ENST00000582288 TIE1P35590 1138 aa9.09□□□□□ -0.95
TVP23B-210ENST00000582288 SLAIN1Q8ND83 568 aa9.09□□□□□ -0.95
TVP23B-210ENST00000582288 PIK3C2AO00443 1686 aa9.09□□□□□ -0.95
TVP23B-210ENST00000582288 QRICH2Q9H0J4 1663 aa9.08□□□□□ -0.96
TVP23B-210ENST00000582288 ZBTB7CA1YPR0 619 aa9.08□□□□□ -0.96
TVP23B-210ENST00000582288 CSB-PGBD3P0DP91 1061 aa9.08□□□□□ -0.96
TVP23B-210ENST00000582288 HSPA6P17066 643 aa9.08□□□□□ -0.96
TVP23B-210ENST00000582288 ZNF827Q17R98 1081 aa9.08□□□□□ -0.96
TVP23B-210ENST00000582288 TTC21AQ8NDW8 1320 aa9.07□□□□□ -0.96
TVP23B-210ENST00000582288 TMEM121BQ9BXQ6 578 aaPredicted RBP9.07□□□□□ -0.96
TVP23B-210ENST00000582288 TSPYL2Q9H2G4 693 aaPredicted RBP9.07□□□□□ -0.96
TVP23B-210ENST00000582288 LRRC4BQ9NT99 713 aa9.07□□□□□ -0.96
TVP23B-210ENST00000582288 CABP1Q9NZU7 370 aa9.07□□□□□ -0.96
TVP23B-210ENST00000582288 CENPJQ9HC77 1338 aaPredicted RBP9.06□□□□□ -0.96
TVP23B-210ENST00000582288 NFAT5O94916 1531 aa9.06□□□□□ -0.96
TVP23B-210ENST00000582288 BTAF1O14981 1849 aa9.06□□□□□ -0.96
TVP23B-210ENST00000582288 HMGB2P26583 209 aaKnown RBP9.06□□□□□ -0.96
TVP23B-210ENST00000582288 CABP2Q9NPB3 220 aa9.06□□□□□ -0.96
TVP23B-210ENST00000582288 PNPLA7Q6ZV29 1317 aa9.05□□□□□ -0.96
TVP23B-210ENST00000582288 ATP10DQ9P241 1426 aa9.05□□□□□ -0.96
TVP23B-210ENST00000582288 RGPD5Q99666 1765 aa9.05□□□□□ -0.96
TVP23B-210ENST00000582288 ADCY9O60503 1353 aa9.05□□□□□ -0.96
TVP23B-210ENST00000582288 RAB3GAP2Q9H2M9 1393 aa9.05□□□□□ -0.96
TVP23B-210ENST00000582288 IL2RBP14784 551 aa9.05□□□□□ -0.96
TVP23B-210ENST00000582288 YBX3P16989 372 aaKnown RBP eCLIP9.05□□□□□ -0.96
TVP23B-210ENST00000582288 NLGN2Q8NFZ4 835 aa9.05□□□□□ -0.96
TVP23B-210ENST00000582288 GPBP1L1Q9HC44 474 aaPredicted RBP9.05□□□□□ -0.96
TVP23B-210ENST00000582288 ERBB3P21860 1342 aa9.05□□□□□ -0.96
TVP23B-210ENST00000582288 TTC21BQ7Z4L5 1316 aa9.05□□□□□ -0.96
TVP23B-210ENST00000582288 KIF12Q96FN5 646 aa9.04□□□□□ -0.96
TVP23B-210ENST00000582288 ACSBG1Q96GR2 724 aa9.04□□□□□ -0.96
TVP23B-210ENST00000582288 TFCP2L1Q9NZI6 479 aa9.04□□□□□ -0.96
TVP23B-210ENST00000582288 COLQQ9Y215 455 aaPredicted RBP9.04□□□□□ -0.96
TVP23B-210ENST00000582288 KLHL34Q8N239 644 aa9.03□□□□□ -0.96
TVP23B-210ENST00000582288 CD2APQ9Y5K6 639 aa9.03□□□□□ -0.96
TVP23B-210ENST00000582288 EVC2Q86UK5 1308 aa9.03□□□□□ -0.96
TVP23B-210ENST00000582288 USP31Q70CQ4 1352 aa9.02□□□□□ -0.97
TVP23B-210ENST00000582288 USP54Q70EL1 1684 aa9.02□□□□□ -0.97
TVP23B-210ENST00000582288 NBPF1Q3BBV0 1214 aa9.02□□□□□ -0.97
TVP23B-210ENST00000582288 IER5LQ5T953 404 aa9.02□□□□□ -0.97
TVP23B-210ENST00000582288 ANKRD36BQ8N2N9 1353 aa9.01□□□□□ -0.97
TVP23B-210ENST00000582288 LY75O60449 1722 aa9.01□□□□□ -0.97
TVP23B-210ENST00000582288 APLP1P51693 650 aa9.01□□□□□ -0.97
TVP23B-210ENST00000582288 SNPHO15079 494 aa9□□□□□ -0.97
TVP23B-210ENST00000582288 FLAD1Q8NFF5 587 aa9□□□□□ -0.97
TVP23B-210ENST00000582288 NLRP2Q9NX02 1062 aa9□□□□□ -0.97
TVP23B-210ENST00000582288 TUBGCP6Q96RT7 1819 aa9□□□□□ -0.97
TVP23B-210ENST00000582288 ANKRD24Q8TF21 1146 aa8.99□□□□□ -0.97
TVP23B-210ENST00000582288 KTN1Q86UP2 1357 aaKnown RBP8.99□□□□□ -0.97
TVP23B-210ENST00000582288 FAM208AQ9UK61 1670 aaKnown RBP8.98□□□□□ -0.97
TVP23B-210ENST00000582288 KIF3CO14782 793 aa8.98□□□□□ -0.97
TVP23B-210ENST00000582288 SOX12O15370 315 aa8.98□□□□□ -0.97
TVP23B-210ENST00000582288 COL23A1Q86Y22 540 aaPredicted RBP8.98□□□□□ -0.97
TVP23B-210ENST00000582288 DNAJC5GQ8N7S2 189 aa8.98□□□□□ -0.97
TVP23B-210ENST00000582288 TRPC6Q9Y210 931 aa8.98□□□□□ -0.97
TVP23B-210ENST00000582288 NSD2O96028 1365 aa8.98□□□□□ -0.97
TVP23B-210ENST00000582288 MON2Q7Z3U7 1717 aa8.97□□□□□ -0.97
TVP23B-210ENST00000582288 TTLL13PA6NNM8 815 aa8.97□□□□□ -0.97
TVP23B-210ENST00000582288 PRIM1P49642 420 aaKnown RBP8.97□□□□□ -0.97
TVP23B-210ENST00000582288 CCNL1Q9UK58 526 aaPredicted RBP8.97□□□□□ -0.97
TVP23B-210ENST00000582288 LTN1O94822 1766 aa8.96□□□□□ -0.97
TVP23B-210ENST00000582288 TOMM70O94826 608 aa8.96□□□□□ -0.98
TVP23B-210ENST00000582288 DDX54Q8TDD1 881 aaKnown RBP8.96□□□□□ -0.98
TVP23B-210ENST00000582288 USP47Q96K76 1375 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms